Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17f03
         (610 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC069235-1|AAH69235.1|  577|Homo sapiens THAP domain containing ...    40   0.005
AF258556-1|AAG23759.1|  577|Homo sapiens PP238 protein.                40   0.005
AC133528-4|AAY14918.1|  577|Homo sapiens unknown protein.              40   0.005
BC131722-1|AAI31723.1|  102|Homo sapiens THAP9 protein protein.        38   0.028
CR533485-1|CAG38516.1|  228|Homo sapiens DKFZP564I0422 protein.        38   0.037
BC008358-1|AAH08358.1|  228|Homo sapiens THAP domain containing,...    38   0.037

>BC069235-1|AAH69235.1|  577|Homo sapiens THAP domain containing 4
           protein.
          Length = 577

 Score = 40.3 bits (90), Expect = 0.005
 Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
 Frame = +3

Query: 315 IGVHQFP-KDKKIGRLWLKAI*REKSIHTKSSRLCHKLFVESDYENISKYTGVKH*HKYL 491
           +  H+FP KD K    WLKA+ R+    TK S LC + F +  +        ++  H+ L
Sbjct: 22  VSFHRFPLKDSKRLIQWLKAVQRDNWTPTKYSFLCSEHFTKDSFSK-----RLEDQHRLL 76

Query: 492 KKGAVPSIF 518
           K  AVPSIF
Sbjct: 77  KPTAVPSIF 85


>AF258556-1|AAG23759.1|  577|Homo sapiens PP238 protein.
          Length = 577

 Score = 40.3 bits (90), Expect = 0.005
 Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
 Frame = +3

Query: 315 IGVHQFP-KDKKIGRLWLKAI*REKSIHTKSSRLCHKLFVESDYENISKYTGVKH*HKYL 491
           +  H+FP KD K    WLKA+ R+    TK S LC + F +  +        ++  H+ L
Sbjct: 22  VSFHRFPLKDSKRLIQWLKAVQRDNWTPTKYSFLCSEHFTKDSFSK-----RLEDQHRLL 76

Query: 492 KKGAVPSIF 518
           K  AVPSIF
Sbjct: 77  KPTAVPSIF 85


>AC133528-4|AAY14918.1|  577|Homo sapiens unknown protein.
          Length = 577

 Score = 40.3 bits (90), Expect = 0.005
 Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
 Frame = +3

Query: 315 IGVHQFP-KDKKIGRLWLKAI*REKSIHTKSSRLCHKLFVESDYENISKYTGVKH*HKYL 491
           +  H+FP KD K    WLKA+ R+    TK S LC + F +  +        ++  H+ L
Sbjct: 22  VSFHRFPLKDSKRLIQWLKAVQRDNWTPTKYSFLCSEHFTKDSFSK-----RLEDQHRLL 76

Query: 492 KKGAVPSIF 518
           K  AVPSIF
Sbjct: 77  KPTAVPSIF 85


>BC131722-1|AAI31723.1|  102|Homo sapiens THAP9 protein protein.
          Length = 102

 Score = 37.9 bits (84), Expect = 0.028
 Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
 Frame = +3

Query: 252 LRRS*NCNGTMTRCFVPICSEIGV--HQFPKDKKIGRLWLKAI*REKSIHTK------SS 407
           + RS +  G  TR  V +  E G+  HQFP D      W++A+ R      K       +
Sbjct: 1   MTRSCSAVGCSTRDTV-LSRERGLSFHQFPTDTIQRSKWIRAVNRVDPRSKKIWIPGPGA 59

Query: 408 RLCHKLFVESDYENISKYTGVKH*HKYLKKGAVPSIFSWNMK 533
            LC K F ESD+E+     G++   + LKKGAVPS+  + M+
Sbjct: 60  ILCSKHFQESDFESY----GIR---RKLKKGAVPSVSLYKMR 94


>CR533485-1|CAG38516.1|  228|Homo sapiens DKFZP564I0422 protein.
          Length = 228

 Score = 37.5 bits (83), Expect = 0.037
 Identities = 27/84 (32%), Positives = 42/84 (50%)
 Frame = +3

Query: 315 IGVHQFPKDKKIGRLWLKAI*REKSIHTKSSRLCHKLFVESDYENISKYTGVKH*HKYLK 494
           I  H+FP D K  + W++ + R+  +  K + LC K F  S ++     TG     + LK
Sbjct: 20  ISFHRFPLDPKRRKEWVRLVRRKNFVPGKHTFLCSKHFEASCFD----LTGQT---RRLK 72

Query: 495 KGAVPSIFSWNMKPVSEETKSREV 566
             AVP+IF +     S + KSR +
Sbjct: 73  MDAVPTIFDFCTHIKSMKLKSRNL 96


>BC008358-1|AAH08358.1|  228|Homo sapiens THAP domain containing,
           apoptosis associated protein 2 protein.
          Length = 228

 Score = 37.5 bits (83), Expect = 0.037
 Identities = 27/84 (32%), Positives = 42/84 (50%)
 Frame = +3

Query: 315 IGVHQFPKDKKIGRLWLKAI*REKSIHTKSSRLCHKLFVESDYENISKYTGVKH*HKYLK 494
           I  H+FP D K  + W++ + R+  +  K + LC K F  S ++     TG     + LK
Sbjct: 20  ISFHRFPLDPKRRKEWVRLVRRKNFVPGKHTFLCSKHFEASCFD----LTGQT---RRLK 72

Query: 495 KGAVPSIFSWNMKPVSEETKSREV 566
             AVP+IF +     S + KSR +
Sbjct: 73  MDAVPTIFDFCTHIKSMKLKSRNL 96


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,273,057
Number of Sequences: 237096
Number of extensions: 1611045
Number of successful extensions: 2672
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2665
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)