Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17f01
         (598 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   5.7  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    23   9.9  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    23   9.9  
AY659930-1|AAT51798.2|  144|Anopheles gambiae lysozyme c-3 protein.    23   9.9  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   9.9  

>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +2

Query: 308 QALPRDYQLGSEPNGPCAYEISQFLQCASSRDNLQEC 418
           ++LPR Y + S+  G C  E   F     + DN   C
Sbjct: 506 KSLPRLYSVDSKTCGDCHQECKDFCY-GPNEDNCGSC 541


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +2

Query: 137 HAPARPPPMVVTPTPQR 187
           H P RP P V  P P +
Sbjct: 425 HPPVRPTPSVPRPLPSQ 441


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 12/31 (38%), Positives = 13/31 (41%)
 Frame = +2

Query: 83  KMSSRRGGSKTRYSRSNQHAPARPPPMVVTP 175
           K S   G  K+R  R      A  PP V TP
Sbjct: 538 KDSKAAGMEKSRKKRGAPKRKATSPPAVATP 568


>AY659930-1|AAT51798.2|  144|Anopheles gambiae lysozyme c-3 protein.
          Length = 144

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 13/47 (27%), Positives = 23/47 (48%)
 Frame = +2

Query: 305 TQALPRDYQLGSEPNGPCAYEISQFLQCASSRDNLQECEAFNEALRE 445
           T AL +    GS+  G   ++I+ +  CA  +    EC+    +LR+
Sbjct: 55  TSALNKKNWNGSKDYG--IFQINNYYWCAEGKVGANECKLQCSSLRD 99


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = +3

Query: 93  LVGVAVRLVIRALTSMH 143
           L+G+AV L+ + LTS+H
Sbjct: 781 LIGMAVLLLWKVLTSIH 797


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 544,992
Number of Sequences: 2352
Number of extensions: 9970
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)