Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte17f01
(598 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC065232-1|AAH65232.1| 142|Homo sapiens chromosome 22 open read... 65 2e-10
AB050774-1|BAB83036.1| 142|Homo sapiens N27C7-4 protein. 65 2e-10
BC100275-1|AAI00276.1| 151|Homo sapiens coiled-coil-helix-coile... 56 1e-07
BC071985-1|AAH71985.1| 151|Homo sapiens coiled-coil-helix-coile... 56 1e-07
BC066331-1|AAH66331.1| 151|Homo sapiens CHCHD2 protein protein. 56 1e-07
BC015639-1|AAH15639.1| 151|Homo sapiens coiled-coil-helix-coile... 56 1e-07
BC003079-1|AAH03079.1| 151|Homo sapiens coiled-coil-helix-coile... 56 1e-07
AY633613-1|AAV33306.1| 151|Homo sapiens aging-associated gene 1... 56 1e-07
AY605046-1|AAT35813.1| 151|Homo sapiens HCV NS2 trans-regulated... 56 1e-07
AC006970-1|AAQ96886.1| 151|Homo sapiens unknown protein. 56 1e-07
AL450243-1|CAI15794.1| 151|Homo sapiens coiled-coil-helix-coile... 45 2e-04
>BC065232-1|AAH65232.1| 142|Homo sapiens chromosome 22 open reading
frame 16 protein.
Length = 142
Score = 65.3 bits (152), Expect = 2e-10
Identities = 42/129 (32%), Positives = 58/129 (44%), Gaps = 9/129 (6%)
Frame = +2
Query: 92 SRRGGSK--TRYSRSNQHAPARPPPMVVTPTP----QRSLFRDXXXXXXXXXXXXXXXXX 253
SR S+ +R + + H PA PPP P P Q L
Sbjct: 5 SRSAASRPASRPAAPSAHPPAHPPPSAAAPAPAPSGQPGLMAQMATTAAGVAVGSAVGHV 64
Query: 254 XXXXITGLFSGRRREEVTQALPR-DYQLGSEP--NGPCAYEISQFLQCASSRDNLQECEA 424
+TG FSG E A+ + +P GPCAYEI QFL C++++ +L CE
Sbjct: 65 MGSALTGAFSGGSSEPSQPAVQQAPTPAAPQPLQMGPCAYEIRQFLDCSTTQSDLSLCEG 124
Query: 425 FNEALRECK 451
F+EAL++CK
Sbjct: 125 FSEALKQCK 133
>AB050774-1|BAB83036.1| 142|Homo sapiens N27C7-4 protein.
Length = 142
Score = 65.3 bits (152), Expect = 2e-10
Identities = 42/129 (32%), Positives = 58/129 (44%), Gaps = 9/129 (6%)
Frame = +2
Query: 92 SRRGGSK--TRYSRSNQHAPARPPPMVVTPTP----QRSLFRDXXXXXXXXXXXXXXXXX 253
SR S+ +R + + H PA PPP P P Q L
Sbjct: 5 SRSAASRPASRPAAPSAHPPAHPPPSAAAPAPAPSGQPGLMAQMATTAAGVAVGSAVGHV 64
Query: 254 XXXXITGLFSGRRREEVTQALPR-DYQLGSEP--NGPCAYEISQFLQCASSRDNLQECEA 424
+TG FSG E A+ + +P GPCAYEI QFL C++++ +L CE
Sbjct: 65 MGSALTGAFSGGSSEPSQPAVQQAPTPAAPQPLQMGPCAYEIRQFLDCSTTQSDLSLCEG 124
Query: 425 FNEALRECK 451
F+EAL++CK
Sbjct: 125 FSEALKQCK 133
>BC100275-1|AAI00276.1| 151|Homo sapiens
coiled-coil-helix-coiled-coil-helix domain containing 2
protein.
Length = 151
Score = 56.0 bits (129), Expect = 1e-07
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Frame = +2
Query: 266 ITGLFSGRR-----REEVTQALPRDYQLGSEPNGPCAYEISQFLQCASSRDNLQECEAFN 430
ITG FSG R ++T P+ Q + PC YEI QFL+CA ++ +++ CE FN
Sbjct: 80 ITGGFSGGSNAEPARPDITYQEPQGTQPAQQQQ-PCLYEIKQFLECAQNQGDIKLCEGFN 138
Query: 431 EALRECKRRNRL 466
E L++C+ N L
Sbjct: 139 EVLKQCRLANGL 150
>BC071985-1|AAH71985.1| 151|Homo sapiens
coiled-coil-helix-coiled-coil-helix domain containing 2
protein.
Length = 151
Score = 56.0 bits (129), Expect = 1e-07
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Frame = +2
Query: 266 ITGLFSGRR-----REEVTQALPRDYQLGSEPNGPCAYEISQFLQCASSRDNLQECEAFN 430
ITG FSG R ++T P+ Q + PC YEI QFL+CA ++ +++ CE FN
Sbjct: 80 ITGGFSGGSNAEPARPDITYQEPQGTQPAQQQQ-PCLYEIKQFLECAQNQGDIKLCEGFN 138
Query: 431 EALRECKRRNRL 466
E L++C+ N L
Sbjct: 139 EVLKQCRLANGL 150
>BC066331-1|AAH66331.1| 151|Homo sapiens CHCHD2 protein protein.
Length = 151
Score = 56.0 bits (129), Expect = 1e-07
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Frame = +2
Query: 266 ITGLFSGRR-----REEVTQALPRDYQLGSEPNGPCAYEISQFLQCASSRDNLQECEAFN 430
ITG FSG R ++T P+ Q + PC YEI QFL+CA ++ +++ CE FN
Sbjct: 80 ITGGFSGGSNAEPARPDITYQEPQGTQPAQQQQ-PCLYEIKQFLECAQNQGDIKLCEGFN 138
Query: 431 EALRECKRRNRL 466
E L++C+ N L
Sbjct: 139 EVLKQCRLANGL 150
>BC015639-1|AAH15639.1| 151|Homo sapiens
coiled-coil-helix-coiled-coil-helix domain containing 2
protein.
Length = 151
Score = 56.0 bits (129), Expect = 1e-07
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Frame = +2
Query: 266 ITGLFSGRR-----REEVTQALPRDYQLGSEPNGPCAYEISQFLQCASSRDNLQECEAFN 430
ITG FSG R ++T P+ Q + PC YEI QFL+CA ++ +++ CE FN
Sbjct: 80 ITGGFSGGSNAEPARPDITYQEPQGTQPAQQQQ-PCLYEIKQFLECAQNQGDIKLCEGFN 138
Query: 431 EALRECKRRNRL 466
E L++C+ N L
Sbjct: 139 EVLKQCRLANGL 150
>BC003079-1|AAH03079.1| 151|Homo sapiens
coiled-coil-helix-coiled-coil-helix domain containing 2
protein.
Length = 151
Score = 56.0 bits (129), Expect = 1e-07
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Frame = +2
Query: 266 ITGLFSGRR-----REEVTQALPRDYQLGSEPNGPCAYEISQFLQCASSRDNLQECEAFN 430
ITG FSG R ++T P+ Q + PC YEI QFL+CA ++ +++ CE FN
Sbjct: 80 ITGGFSGGSNAEPARPDITYQEPQGTQPAQQQQ-PCLYEIKQFLECAQNQGDIKLCEGFN 138
Query: 431 EALRECKRRNRL 466
E L++C+ N L
Sbjct: 139 EVLKQCRLANGL 150
>AY633613-1|AAV33306.1| 151|Homo sapiens aging-associated gene 10
protein protein.
Length = 151
Score = 56.0 bits (129), Expect = 1e-07
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Frame = +2
Query: 266 ITGLFSGRR-----REEVTQALPRDYQLGSEPNGPCAYEISQFLQCASSRDNLQECEAFN 430
ITG FSG R ++T P+ Q + PC YEI QFL+CA ++ +++ CE FN
Sbjct: 80 ITGGFSGGSNAEPARPDITYQEPQGTQPAQQQQ-PCLYEIKQFLECAQNQGDIKLCEGFN 138
Query: 431 EALRECKRRNRL 466
E L++C+ N L
Sbjct: 139 EVLKQCRLANGL 150
>AY605046-1|AAT35813.1| 151|Homo sapiens HCV NS2 trans-regulated
protein protein.
Length = 151
Score = 56.0 bits (129), Expect = 1e-07
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Frame = +2
Query: 266 ITGLFSGRR-----REEVTQALPRDYQLGSEPNGPCAYEISQFLQCASSRDNLQECEAFN 430
ITG FSG R ++T P+ Q + PC YEI QFL+CA ++ +++ CE FN
Sbjct: 80 ITGGFSGGSNAEPARPDITYQEPQGTQPAQQQQ-PCLYEIKQFLECAQNQGDIKLCEGFN 138
Query: 431 EALRECKRRNRL 466
E L++C+ N L
Sbjct: 139 EVLKQCRLANGL 150
>AC006970-1|AAQ96886.1| 151|Homo sapiens unknown protein.
Length = 151
Score = 56.0 bits (129), Expect = 1e-07
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Frame = +2
Query: 266 ITGLFSGRR-----REEVTQALPRDYQLGSEPNGPCAYEISQFLQCASSRDNLQECEAFN 430
ITG FSG R ++T P+ Q + PC YEI QFL+CA ++ +++ CE FN
Sbjct: 80 ITGGFSGGSNAEPARPDITYQEPQGTQPAQQQQ-PCLYEIKQFLECAQNQGDIKLCEGFN 138
Query: 431 EALRECKRRNRL 466
E L++C+ N L
Sbjct: 139 EVLKQCRLANGL 150
>AL450243-1|CAI15794.1| 151|Homo sapiens
coiled-coil-helix-coiled-coil-helix domain containing 9
protein.
Length = 151
Score = 44.8 bits (101), Expect = 2e-04
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Frame = +2
Query: 266 ITGLFSGRRREEVTQA-LPRDYQLGSEP---NGPCAYEISQFLQCASSRDNLQECEAFNE 433
+TG FSG E + + G++P PC Y I QFL+CA ++ +++ CE F++
Sbjct: 80 VTGGFSGGSNAEPARPDIAYQEPQGTQPAQQQQPCFYGIKQFLECAQNQGDIKLCEDFSK 139
Query: 434 ALRECK 451
L++C+
Sbjct: 140 VLKQCR 145
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,991,583
Number of Sequences: 237096
Number of extensions: 1422243
Number of successful extensions: 3789
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3781
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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