Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17e20
         (600 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0093 - 16567817-16568077,16568613-16568710,16568770-16568968     28   5.0  
07_01_0363 - 2675951-2676049,2676146-2676279,2676362-2676395,267...    28   6.6  

>06_03_0093 - 16567817-16568077,16568613-16568710,16568770-16568968
          Length = 185

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 455 FQDLSRSSRWQISETGESLRDRCC 384
           F+D    +RW ++  G  +R RCC
Sbjct: 141 FRDWDERNRWTVAALGIGMRGRCC 164


>07_01_0363 -
           2675951-2676049,2676146-2676279,2676362-2676395,
           2676485-2676604,2676720-2676836,2676924-2677043,
           2677129-2677218,2677313-2677438,2677566-2677619,
           2677856-2677936,2678025-2678132,2678218-2678289,
           2678885-2678947,2679476-2679646
          Length = 462

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -1

Query: 504 SVNPSIFSIAFRCP*WFSGSVKK 436
           S+   IF   F CP WFS S KK
Sbjct: 221 SLYKKIFKADFSCPSWFSTSAKK 243


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,590,755
Number of Sequences: 37544
Number of extensions: 286951
Number of successful extensions: 613
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 613
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1435654836
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)