BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte17e20
(600 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L24158-1|AAA16099.1| 1000|Homo sapiens integrin alpha 9 protein ... 32 1.8
D25303-1|BAA04984.1| 1035|Homo sapiens integrin alpha subunit pr... 32 1.8
BC078665-1|AAH78665.1| 775|Homo sapiens GRIP and coiled-coil do... 32 1.8
BC014100-1|AAH14100.1| 775|Homo sapiens GRIP and coiled-coil do... 32 1.8
AK025688-1|BAB15218.1| 434|Homo sapiens protein ( Homo sapiens ... 32 1.8
AF525417-1|AAM91948.1| 775|Homo sapiens Golgi coiled coil prote... 32 1.8
Y07684-1|CAA68948.1| 388|Homo sapiens P2X4 purinoceptor protein. 29 9.4
U87270-1|AAD00556.1| 388|Homo sapiens P2X4 purinoreceptor protein. 29 9.4
U83993-1|AAD00553.1| 388|Homo sapiens P2X4 purinoreceptor protein. 29 9.4
DQ851491-1|ABI31772.1| 123|Homo sapiens purinergic receptor P2X... 29 9.4
BT019739-1|AAV38544.1| 361|Homo sapiens purinergic receptor P2X... 29 9.4
BT019738-1|AAV38543.1| 388|Homo sapiens purinergic receptor P2X... 29 9.4
BC033826-1|AAH33826.1| 388|Homo sapiens purinergic receptor P2X... 29 9.4
AL391415-3|CAI21588.1| 4695|Homo sapiens dynein, axonemal, heavy... 29 9.4
AL391415-2|CAI21587.1| 4176|Homo sapiens dynein, axonemal, heavy... 29 9.4
AL353700-3|CAI20294.1| 4695|Homo sapiens dynein, axonemal, heavy... 29 9.4
AL353700-2|CAI20293.1| 4176|Homo sapiens dynein, axonemal, heavy... 29 9.4
AL353700-1|CAI20292.1| 4490|Homo sapiens dynein, axonemal, heavy... 29 9.4
AL035690-5|CAI19770.1| 4695|Homo sapiens dynein, axonemal, heavy... 29 9.4
AL035690-1|CAI19769.1| 4490|Homo sapiens dynein, axonemal, heavy... 29 9.4
AL035555-4|CAI19822.1| 4695|Homo sapiens dynein, axonemal, heavy... 29 9.4
AL035555-3|CAI19821.1| 4176|Homo sapiens dynein, axonemal, heavy... 29 9.4
AL035555-1|CAI19819.1| 4490|Homo sapiens dynein, axonemal, heavy... 29 9.4
AL034345-4|CAI42436.1| 4695|Homo sapiens dynein, axonemal, heavy... 29 9.4
AL034345-3|CAI42435.1| 4176|Homo sapiens dynein, axonemal, heavy... 29 9.4
AL034345-1|CAI42433.1| 4490|Homo sapiens dynein, axonemal, heavy... 29 9.4
AF356519-1|AAK60620.1| 4490|Homo sapiens axonemal dynein heavy c... 29 9.4
AF191093-1|AAF06661.1| 388|Homo sapiens P2X4 purinoceptor protein. 29 9.4
AF012903-1|AAB66834.1| 254|Homo sapiens P2X4 ATP-gated cation c... 29 9.4
AF000234-1|AAB58405.1| 354|Homo sapiens P2x purinoceptor protein. 29 9.4
>L24158-1|AAA16099.1| 1000|Homo sapiens integrin alpha 9 protein
protein.
Length = 1000
Score = 31.9 bits (69), Expect = 1.8
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 287 VLLSAKEAVSLWVLGARKAMYRRIVEAQKGNKNNID 394
+L+ AV LW +G + Y+ I+EA+K K N D
Sbjct: 956 ILIFLLLAVLLWKMGFFRRRYKEIIEAEKNRKENED 991
>D25303-1|BAA04984.1| 1035|Homo sapiens integrin alpha subunit
protein.
Length = 1035
Score = 31.9 bits (69), Expect = 1.8
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 287 VLLSAKEAVSLWVLGARKAMYRRIVEAQKGNKNNID 394
+L+ AV LW +G + Y+ I+EA+K K N D
Sbjct: 991 ILIFLLLAVLLWKMGFFRRRYKEIIEAEKNRKENED 1026
>BC078665-1|AAH78665.1| 775|Homo sapiens GRIP and coiled-coil
domain containing 1 protein.
Length = 775
Score = 31.9 bits (69), Expect = 1.8
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = +2
Query: 407 LQFLKSAIYYFLTDPEN--HQGHLNAIENILGFTEAEKKNIRK 529
L++LK+ IY FLT P++ Q L AI IL F+ EK+ I +
Sbjct: 720 LEYLKNIIYRFLTLPDSLGRQQTLTAILTILHFSPEEKQVIMR 762
>BC014100-1|AAH14100.1| 775|Homo sapiens GRIP and coiled-coil
domain containing 1 protein.
Length = 775
Score = 31.9 bits (69), Expect = 1.8
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = +2
Query: 407 LQFLKSAIYYFLTDPEN--HQGHLNAIENILGFTEAEKKNIRK 529
L++LK+ IY FLT P++ Q L AI IL F+ EK+ I +
Sbjct: 720 LEYLKNIIYRFLTLPDSLGRQQTLTAILTILHFSPEEKQVIMR 762
>AK025688-1|BAB15218.1| 434|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22035 fis, clone HEP08838. ).
Length = 434
Score = 31.9 bits (69), Expect = 1.8
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = +2
Query: 407 LQFLKSAIYYFLTDPEN--HQGHLNAIENILGFTEAEKKNIRK 529
L++LK+ IY FLT P++ Q L AI IL F+ EK+ I +
Sbjct: 379 LEYLKNIIYRFLTLPDSLGRQQTLTAILTILHFSPEEKQVIMR 421
>AF525417-1|AAM91948.1| 775|Homo sapiens Golgi coiled coil protein
1 protein.
Length = 775
Score = 31.9 bits (69), Expect = 1.8
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = +2
Query: 407 LQFLKSAIYYFLTDPEN--HQGHLNAIENILGFTEAEKKNIRK 529
L++LK+ IY FLT P++ Q L AI IL F+ EK+ I +
Sbjct: 720 LEYLKNIIYRFLTLPDSLGRQQTLTAILTILHFSPEEKQVIMR 762
>Y07684-1|CAA68948.1| 388|Homo sapiens P2X4 purinoceptor protein.
Length = 388
Score = 29.5 bits (63), Expect = 9.4
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 377 NKNNIDPEVTLQFLKSAIYYFLTDP 451
+K NI P +T +LKS IY TDP
Sbjct: 201 SKRNILPNITTTYLKSCIYDAKTDP 225
>U87270-1|AAD00556.1| 388|Homo sapiens P2X4 purinoreceptor protein.
Length = 388
Score = 29.5 bits (63), Expect = 9.4
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 377 NKNNIDPEVTLQFLKSAIYYFLTDP 451
+K NI P +T +LKS IY TDP
Sbjct: 201 SKRNILPNITTTYLKSCIYDAKTDP 225
>U83993-1|AAD00553.1| 388|Homo sapiens P2X4 purinoreceptor protein.
Length = 388
Score = 29.5 bits (63), Expect = 9.4
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 377 NKNNIDPEVTLQFLKSAIYYFLTDP 451
+K NI P +T +LKS IY TDP
Sbjct: 201 SKRNILPNITTTYLKSCIYDAKTDP 225
>DQ851491-1|ABI31772.1| 123|Homo sapiens purinergic receptor P2X
ligand-gated ion channel 4 protein.
Length = 123
Score = 29.5 bits (63), Expect = 9.4
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 377 NKNNIDPEVTLQFLKSAIYYFLTDP 451
+K NI P +T +LKS IY TDP
Sbjct: 40 SKRNILPNITTTYLKSCIYDAKTDP 64
>BT019739-1|AAV38544.1| 361|Homo sapiens purinergic receptor P2X,
ligand-gated ion channel, 4 protein.
Length = 361
Score = 29.5 bits (63), Expect = 9.4
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 377 NKNNIDPEVTLQFLKSAIYYFLTDP 451
+K NI P +T +LKS IY TDP
Sbjct: 174 SKRNILPNITTTYLKSCIYDAKTDP 198
>BT019738-1|AAV38543.1| 388|Homo sapiens purinergic receptor P2X,
ligand-gated ion channel, 4 protein.
Length = 388
Score = 29.5 bits (63), Expect = 9.4
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 377 NKNNIDPEVTLQFLKSAIYYFLTDP 451
+K NI P +T +LKS IY TDP
Sbjct: 201 SKRNILPNITTTYLKSCIYDAKTDP 225
>BC033826-1|AAH33826.1| 388|Homo sapiens purinergic receptor P2X,
ligand-gated ion channel, 4 protein.
Length = 388
Score = 29.5 bits (63), Expect = 9.4
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 377 NKNNIDPEVTLQFLKSAIYYFLTDP 451
+K NI P +T +LKS IY TDP
Sbjct: 201 SKRNILPNITTTYLKSCIYDAKTDP 225
>AL391415-3|CAI21588.1| 4695|Homo sapiens dynein, axonemal, heavy
chain 8 protein.
Length = 4695
Score = 29.5 bits (63), Expect = 9.4
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +1
Query: 418 EICHLLLLDRS*KPSRTSKRYRKYTGIY*SRKEKYSQ 528
+ CH LLL RS P RT + RKY I S +EKY++
Sbjct: 4062 DTCHKLLLIRSWCPDRTVFQARKY--IADSLEEKYTE 4096
>AL391415-2|CAI21587.1| 4176|Homo sapiens dynein, axonemal, heavy
chain 8 protein.
Length = 4176
Score = 29.5 bits (63), Expect = 9.4
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +1
Query: 418 EICHLLLLDRS*KPSRTSKRYRKYTGIY*SRKEKYSQ 528
+ CH LLL RS P RT + RKY I S +EKY++
Sbjct: 4062 DTCHKLLLIRSWCPDRTVFQARKY--IADSLEEKYTE 4096
>AL353700-3|CAI20294.1| 4695|Homo sapiens dynein, axonemal, heavy
chain 8 protein.
Length = 4695
Score = 29.5 bits (63), Expect = 9.4
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +1
Query: 418 EICHLLLLDRS*KPSRTSKRYRKYTGIY*SRKEKYSQ 528
+ CH LLL RS P RT + RKY I S +EKY++
Sbjct: 4062 DTCHKLLLIRSWCPDRTVFQARKY--IADSLEEKYTE 4096
>AL353700-2|CAI20293.1| 4176|Homo sapiens dynein, axonemal, heavy
chain 8 protein.
Length = 4176
Score = 29.5 bits (63), Expect = 9.4
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +1
Query: 418 EICHLLLLDRS*KPSRTSKRYRKYTGIY*SRKEKYSQ 528
+ CH LLL RS P RT + RKY I S +EKY++
Sbjct: 4062 DTCHKLLLIRSWCPDRTVFQARKY--IADSLEEKYTE 4096
>AL353700-1|CAI20292.1| 4490|Homo sapiens dynein, axonemal, heavy
chain 8 protein.
Length = 4490
Score = 29.5 bits (63), Expect = 9.4
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +1
Query: 418 EICHLLLLDRS*KPSRTSKRYRKYTGIY*SRKEKYSQ 528
+ CH LLL RS P RT + RKY I S +EKY++
Sbjct: 3857 DTCHKLLLIRSWCPDRTVFQARKY--IADSLEEKYTE 3891
>AL035690-5|CAI19770.1| 4695|Homo sapiens dynein, axonemal, heavy
chain 8 protein.
Length = 4695
Score = 29.5 bits (63), Expect = 9.4
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +1
Query: 418 EICHLLLLDRS*KPSRTSKRYRKYTGIY*SRKEKYSQ 528
+ CH LLL RS P RT + RKY I S +EKY++
Sbjct: 4062 DTCHKLLLIRSWCPDRTVFQARKY--IADSLEEKYTE 4096
>AL035690-1|CAI19769.1| 4490|Homo sapiens dynein, axonemal, heavy
chain 8 protein.
Length = 4490
Score = 29.5 bits (63), Expect = 9.4
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +1
Query: 418 EICHLLLLDRS*KPSRTSKRYRKYTGIY*SRKEKYSQ 528
+ CH LLL RS P RT + RKY I S +EKY++
Sbjct: 3857 DTCHKLLLIRSWCPDRTVFQARKY--IADSLEEKYTE 3891
>AL035555-4|CAI19822.1| 4695|Homo sapiens dynein, axonemal, heavy
chain 8 protein.
Length = 4695
Score = 29.5 bits (63), Expect = 9.4
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +1
Query: 418 EICHLLLLDRS*KPSRTSKRYRKYTGIY*SRKEKYSQ 528
+ CH LLL RS P RT + RKY I S +EKY++
Sbjct: 4062 DTCHKLLLIRSWCPDRTVFQARKY--IADSLEEKYTE 4096
>AL035555-3|CAI19821.1| 4176|Homo sapiens dynein, axonemal, heavy
chain 8 protein.
Length = 4176
Score = 29.5 bits (63), Expect = 9.4
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +1
Query: 418 EICHLLLLDRS*KPSRTSKRYRKYTGIY*SRKEKYSQ 528
+ CH LLL RS P RT + RKY I S +EKY++
Sbjct: 4062 DTCHKLLLIRSWCPDRTVFQARKY--IADSLEEKYTE 4096
>AL035555-1|CAI19819.1| 4490|Homo sapiens dynein, axonemal, heavy
chain 8 protein.
Length = 4490
Score = 29.5 bits (63), Expect = 9.4
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +1
Query: 418 EICHLLLLDRS*KPSRTSKRYRKYTGIY*SRKEKYSQ 528
+ CH LLL RS P RT + RKY I S +EKY++
Sbjct: 3857 DTCHKLLLIRSWCPDRTVFQARKY--IADSLEEKYTE 3891
>AL034345-4|CAI42436.1| 4695|Homo sapiens dynein, axonemal, heavy
chain 8 protein.
Length = 4695
Score = 29.5 bits (63), Expect = 9.4
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +1
Query: 418 EICHLLLLDRS*KPSRTSKRYRKYTGIY*SRKEKYSQ 528
+ CH LLL RS P RT + RKY I S +EKY++
Sbjct: 4062 DTCHKLLLIRSWCPDRTVFQARKY--IADSLEEKYTE 4096
>AL034345-3|CAI42435.1| 4176|Homo sapiens dynein, axonemal, heavy
chain 8 protein.
Length = 4176
Score = 29.5 bits (63), Expect = 9.4
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +1
Query: 418 EICHLLLLDRS*KPSRTSKRYRKYTGIY*SRKEKYSQ 528
+ CH LLL RS P RT + RKY I S +EKY++
Sbjct: 4062 DTCHKLLLIRSWCPDRTVFQARKY--IADSLEEKYTE 4096
>AL034345-1|CAI42433.1| 4490|Homo sapiens dynein, axonemal, heavy
chain 8 protein.
Length = 4490
Score = 29.5 bits (63), Expect = 9.4
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +1
Query: 418 EICHLLLLDRS*KPSRTSKRYRKYTGIY*SRKEKYSQ 528
+ CH LLL RS P RT + RKY I S +EKY++
Sbjct: 3857 DTCHKLLLIRSWCPDRTVFQARKY--IADSLEEKYTE 3891
>AF356519-1|AAK60620.1| 4490|Homo sapiens axonemal dynein heavy chain
8 protein.
Length = 4490
Score = 29.5 bits (63), Expect = 9.4
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +1
Query: 418 EICHLLLLDRS*KPSRTSKRYRKYTGIY*SRKEKYSQ 528
+ CH LLL RS P RT + RKY I S +EKY++
Sbjct: 3857 DTCHKLLLIRSWCPDRTVFQARKY--IADSLEEKYTE 3891
>AF191093-1|AAF06661.1| 388|Homo sapiens P2X4 purinoceptor protein.
Length = 388
Score = 29.5 bits (63), Expect = 9.4
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 377 NKNNIDPEVTLQFLKSAIYYFLTDP 451
+K NI P +T +LKS IY TDP
Sbjct: 201 SKRNILPNITTTYLKSCIYDAKTDP 225
>AF012903-1|AAB66834.1| 254|Homo sapiens P2X4 ATP-gated cation
channel protein protein.
Length = 254
Score = 29.5 bits (63), Expect = 9.4
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 377 NKNNIDPEVTLQFLKSAIYYFLTDP 451
+K NI P +T +LKS IY TDP
Sbjct: 129 SKRNILPNITTTYLKSCIYDAKTDP 153
>AF000234-1|AAB58405.1| 354|Homo sapiens P2x purinoceptor protein.
Length = 354
Score = 29.5 bits (63), Expect = 9.4
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 377 NKNNIDPEVTLQFLKSAIYYFLTDP 451
+K NI P +T +LKS IY TDP
Sbjct: 167 SKRNILPNITTTYLKSCIYDAKTDP 191
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,451,496
Number of Sequences: 237096
Number of extensions: 1592613
Number of successful extensions: 2952
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 2901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2952
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -