Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17e16
         (604 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49126-3|CAA88941.2|  374|Caenorhabditis elegans Hypothetical pr...    32   0.27 
AL132898-11|CAB60945.4|  552|Caenorhabditis elegans Hypothetical...    29   2.6  
AL132898-6|CAC14409.1|  187|Caenorhabditis elegans Hypothetical ...    29   3.4  
AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical ...    29   3.4  
Z73906-12|CAE17767.1|  170|Caenorhabditis elegans Hypothetical p...    28   4.5  
U88308-3|AAB42329.2|  430|Caenorhabditis elegans Resistance to i...    28   4.5  

>Z49126-3|CAA88941.2|  374|Caenorhabditis elegans Hypothetical
           protein DH11.4 protein.
          Length = 374

 Score = 32.3 bits (70), Expect = 0.27
 Identities = 17/62 (27%), Positives = 34/62 (54%)
 Frame = +1

Query: 169 IKWLILNMKIYPALPMTNAMFMKLMIFRKPISRSLMRRRRTSVSNNCTYRSRILSINSKG 348
           ++++   +K   ALP  NA F ++M+F     R LM +++T+V+ +  ++S +       
Sbjct: 231 VQFVTTTVKKAKALPYNNAPFARIMLFE---GRRLMEQKQTTVNPSLVHKSSVDGSKPSS 287

Query: 349 SS 354
           SS
Sbjct: 288 SS 289


>AL132898-11|CAB60945.4|  552|Caenorhabditis elegans Hypothetical
           protein Y59A8B.22 protein.
          Length = 552

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = +3

Query: 366 VDFSDKLSRKSRIGYRVGEWELAAEGDPETPLQRYNRLRCEFSELLEDVTDQQNKAG 536
           VD SD LS + ++ Y V       E  PET + R +    EF  L   + D +N AG
Sbjct: 106 VDISDALSEREKVKYTVHTRTRLQEMKPETAVVREHE---EFLWLHGTLEDNENYAG 159


>AL132898-6|CAC14409.1|  187|Caenorhabditis elegans Hypothetical
           protein Y59A8B.9 protein.
          Length = 187

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
 Frame = +3

Query: 432 AAEGDPETPLQRYNRLRCEFSELLEDVTDQQNKAGDSEKEE---FSKL 566
           AA   P   +  +N+L+ E  E+   +T+  N     EKE    FSKL
Sbjct: 92  AAAAPPGVDMATFNKLKEELEEVTRQLTESDNVIASLEKERDFYFSKL 139


>AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical
           protein Y59A8B.7 protein.
          Length = 316

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
 Frame = +3

Query: 432 AAEGDPETPLQRYNRLRCEFSELLEDVTDQQNKAGDSEKEE---FSKL 566
           AA   P   +  +N+L+ E  E+   +T+  N     EKE    FSKL
Sbjct: 221 AAAAPPGVDMATFNKLKEELEEVTRQLTESDNVIASLEKERDFYFSKL 268


>Z73906-12|CAE17767.1|  170|Caenorhabditis elegans Hypothetical
           protein D2030.12 protein.
          Length = 170

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3

Query: 492 SELLEDVTDQQNKAGDSEKEEFSKLAVXINT 584
           + L + VTD+    GD  +EEF++L+  I T
Sbjct: 7   TRLFKSVTDKAGDLGDKFEEEFTRLSFNITT 37


>U88308-3|AAB42329.2|  430|Caenorhabditis elegans Resistance to
           inhibitors of cholinesteraseprotein 19 protein.
          Length = 430

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +3

Query: 450 ETPLQRYNRLRCEFSELLEDVTDQQNKAGD-SEKEEFSKLAVXINTTKKLLE 602
           E  +Q  +R +C+ S L+EDV D++ K GD  + E  + +A  I     L +
Sbjct: 320 EEEVQDESRSQCD-SPLIEDVDDERRKTGDLLDLESAASIAFPIGPLATLFD 370


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,544,021
Number of Sequences: 27780
Number of extensions: 239897
Number of successful extensions: 690
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 690
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)