Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte17e15
(545 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen prot... 33 0.18
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 31 0.41
U53337-2|AAA96184.1| 639|Caenorhabditis elegans Hypothetical pr... 31 0.41
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 31 0.54
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 31 0.54
Z92831-4|CAJ58497.1| 447|Caenorhabditis elegans Hypothetical pr... 31 0.72
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 25 1.3
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 25 1.3
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 25 1.3
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 25 1.3
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 25 1.3
Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical pr... 29 2.2
U14635-3|AAN63441.1| 491|Caenorhabditis elegans Hypothetical pr... 29 2.2
U14635-2|AAC46656.2| 522|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z83122-1|CAB05597.1| 293|Caenorhabditis elegans Hypothetical pr... 29 2.9
AL117202-20|CAB57898.4| 1205|Caenorhabditis elegans Hypothetical... 29 2.9
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 29 2.9
Z83237-5|CAB54283.1| 91|Caenorhabditis elegans Hypothetical pr... 28 3.8
U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical pr... 28 3.8
U53154-5|AAC25853.1| 347|Caenorhabditis elegans Hypothetical pr... 28 3.8
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z81473-6|CAB03895.2| 657|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical p... 28 5.0
Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical pr... 28 5.0
U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myos... 28 5.0
L16560-4|AAA27997.1| 111|Caenorhabditis elegans Hypothetical pr... 28 5.0
AL032629-1|CAA21557.1| 399|Caenorhabditis elegans Hypothetical ... 28 5.0
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 27 6.7
U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical p... 27 6.7
U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily ass... 27 6.7
AC024857-2|AAK31567.2| 463|Caenorhabditis elegans Hypothetical ... 27 6.7
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 27 6.7
Z82265-7|CAB05171.2| 425|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical p... 27 8.8
Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z48241-8|CAD44101.1| 589|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z48241-7|CAA88287.1| 1026|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z48241-2|CAB54194.1| 624|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z36237-4|CAD44107.1| 589|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z36237-3|CAA85272.1| 1026|Caenorhabditis elegans Hypothetical pr... 27 8.8
U41624-5|AAF99941.1| 314|Caenorhabditis elegans Collagen protei... 27 8.8
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 27 8.8
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 27 8.8
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 27 8.8
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 27 8.8
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 27 8.8
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 27 8.8
>AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen protein
48 protein.
Length = 285
Score = 32.7 bits (71), Expect = 0.18
Identities = 26/74 (35%), Positives = 30/74 (40%)
Frame = -2
Query: 250 PARVASRGSSWTAAVPFQACCETCPGTLAARRPLSGGTAPPCRALAPNLVFSPGDRDTPG 71
P R + G A P Q G +A G PP +A P SPGD +PG
Sbjct: 216 PGRPGAPGQPGKAGSPGQDGSNGDAG-VAGEPGQRGPPGPPGQAGTPG---SPGDAGSPG 271
Query: 70 QCEEAPRCRRWLAP 29
CE P R LAP
Sbjct: 272 SCEHCPPAR--LAP 283
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 31.5 bits (68), Expect = 0.41
Identities = 20/74 (27%), Positives = 27/74 (36%), Gaps = 2/74 (2%)
Frame = -2
Query: 286 SRAHTPCCACRSPARVASRGSSWTAAVPFQACCETCPGTLAA--RRPLSGGTAPPCRALA 113
++ H C C P S G++ P + PG + P T PPC A
Sbjct: 91 AQEHNSCDGCCLPGAAGSVGAAGRPGTPGRPGAPGAPGHPGKPPQSPCEPLTPPPCPACP 150
Query: 112 PNLVFSPGDRDTPG 71
P +PG PG
Sbjct: 151 PGPPGAPGAPGKPG 164
>U53337-2|AAA96184.1| 639|Caenorhabditis elegans Hypothetical
protein R02E12.4 protein.
Length = 639
Score = 31.5 bits (68), Expect = 0.41
Identities = 18/80 (22%), Positives = 38/80 (47%)
Frame = +1
Query: 55 GPLHIVQECLYHREKRQGLEQVHDTVEQSLLKEVALLRECQDKFRSMLEKVRQQSKNCRA 234
GPL + R R G+E +D + +L +E+ +L+ + L+K ++ K
Sbjct: 532 GPLQVALSRQNQRGLRPGIELCNDKAQHALHQELMMLKGTFLSLENQLDKAKESRKKLDN 591
Query: 235 TQHELETDMRNKEYALGIDS 294
+ +L+ + ++ L ID+
Sbjct: 592 DRDKLQRKLDICDHNLTIDN 611
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein
14 protein.
Length = 345
Score = 31.1 bits (67), Expect = 0.54
Identities = 17/41 (41%), Positives = 19/41 (46%)
Frame = -2
Query: 151 LSGGTAPPCRALAPNLVFSPGDRDTPGQCEEAPRCRRWLAP 29
L G P + AP V PGD PG C+ P R LAP
Sbjct: 305 LPGPPGQPGQNGAPGEVGQPGDNGAPGSCDHCPPAR--LAP 343
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 31.1 bits (67), Expect = 0.54
Identities = 17/41 (41%), Positives = 19/41 (46%)
Frame = -2
Query: 151 LSGGTAPPCRALAPNLVFSPGDRDTPGQCEEAPRCRRWLAP 29
L G P + AP V PGD PG C+ P R LAP
Sbjct: 286 LPGPPGQPGQNGAPGEVGQPGDNGAPGSCDHCPPAR--LAP 324
>Z92831-4|CAJ58497.1| 447|Caenorhabditis elegans Hypothetical
protein F22G12.7 protein.
Length = 447
Score = 30.7 bits (66), Expect = 0.72
Identities = 23/125 (18%), Positives = 51/125 (40%), Gaps = 5/125 (4%)
Frame = +1
Query: 10 SDTRRQLERAIAGIEGPLHIVQECLYHREKRQGLEQVHDTVEQS----LLKEVALLRECQ 177
S T + A++G++ + + E K QG+ + D + ++ + E+A R C
Sbjct: 174 SKTIANRQIALSGVKNEFYKLAEASEDISKLQGINCIEDKINKNVAVEIFSEIADARNCM 233
Query: 178 DKFRSMLEKVRQQSKNCRATQHELETDMRNKEYALGIDSMCHQLNNFSKGLQY-YAGIER 354
+ F E + K + + +E + ++ + I+ H N + + + I R
Sbjct: 234 NTFVDSFENEKISFKTLQVFRRRIEVLIALLDFLVEIERKNHAANVINDSEHFAFNNIRR 293
Query: 355 YDPTV 369
P +
Sbjct: 294 RVPVI 298
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 25.4 bits (53), Expect(2) = 1.3
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -1
Query: 167 RSKATSFRRDCSTVSCTCSKPC 102
R T R C T CTC +PC
Sbjct: 98 RRCCTCCRTCCCTRCCTCCRPC 119
Score = 23.0 bits (47), Expect(2) = 1.3
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -1
Query: 242 CCVARQFLDCCRT 204
CC R+ CCRT
Sbjct: 94 CCCCRRCCTCCRT 106
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 25.4 bits (53), Expect(2) = 1.3
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -1
Query: 167 RSKATSFRRDCSTVSCTCSKPC 102
R T R C T CTC +PC
Sbjct: 98 RRCCTCCRTCCCTRCCTCCRPC 119
Score = 23.0 bits (47), Expect(2) = 1.3
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -1
Query: 242 CCVARQFLDCCRT 204
CC R+ CCRT
Sbjct: 94 CCCCRRCCTCCRT 106
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 25.4 bits (53), Expect(2) = 1.3
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -1
Query: 167 RSKATSFRRDCSTVSCTCSKPC 102
R T R C T CTC +PC
Sbjct: 97 RRCCTCCRTCCCTRCCTCCRPC 118
Score = 23.0 bits (47), Expect(2) = 1.3
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -1
Query: 242 CCVARQFLDCCRT 204
CC R+ CCRT
Sbjct: 93 CCCCRRCCTCCRT 105
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 25.4 bits (53), Expect(2) = 1.3
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -1
Query: 167 RSKATSFRRDCSTVSCTCSKPC 102
R T R C T CTC +PC
Sbjct: 96 RRCCTCCRTCCCTRCCTCCRPC 117
Score = 23.0 bits (47), Expect(2) = 1.3
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -1
Query: 242 CCVARQFLDCCRT 204
CC R+ CCRT
Sbjct: 92 CCCCRRCCTCCRT 104
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 25.4 bits (53), Expect(2) = 1.3
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -1
Query: 167 RSKATSFRRDCSTVSCTCSKPC 102
R T R C T CTC +PC
Sbjct: 97 RRCCTCCRTCCCTRCCTCCRPC 118
Score = 23.0 bits (47), Expect(2) = 1.3
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -1
Query: 242 CCVARQFLDCCRT 204
CC R+ CCRT
Sbjct: 93 CCCCRRCCTCCRT 105
>Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical protein
W05B2.2 protein.
Length = 1278
Score = 29.1 bits (62), Expect = 2.2
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
Frame = -2
Query: 259 CRSPARVASRGSSWTAAVPFQACCE-TCPGTLAARRPLSGG--TAPPCRALAPNLVFSPG 89
C S +R ASR + + + CC+ P T RPLS G P CR+ A + + S
Sbjct: 1163 CSSSSRCASRICRQSPVLRYSICCQRRTPKTRLLIRPLSEGQIRKPICRSEAESNMGSCL 1222
Query: 88 DRDTPGQ--CEEAPRC 47
+ G+ CE +C
Sbjct: 1223 PKLFAGETGCEADEQC 1238
>U14635-3|AAN63441.1| 491|Caenorhabditis elegans Hypothetical
protein C27H5.2c protein.
Length = 491
Score = 29.1 bits (62), Expect = 2.2
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +1
Query: 4 KLSDTRRQLERAIAGIEGPLHIVQECLYHREKRQGLEQVHDTVEQSLLKEVALLRECQDK 183
KL + LER A ++ L V E K + +Q D V+ + EV LRE
Sbjct: 378 KLRNRNEDLERRFAHVDDELACVNENWAKELKEK--QQDWDKVKYAAESEVLSLREQLVH 435
Query: 184 FRSMLEK-VRQQSKNCRATQHELE 252
+S+LE R+ ++N R ELE
Sbjct: 436 LQSILESATREAAENARRVS-ELE 458
>U14635-2|AAC46656.2| 522|Caenorhabditis elegans Hypothetical
protein C27H5.2a protein.
Length = 522
Score = 29.1 bits (62), Expect = 2.2
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +1
Query: 4 KLSDTRRQLERAIAGIEGPLHIVQECLYHREKRQGLEQVHDTVEQSLLKEVALLRECQDK 183
KL + LER A ++ L V E K + +Q D V+ + EV LRE
Sbjct: 378 KLRNRNEDLERRFAHVDDELACVNENWAKELKEK--QQDWDKVKYAAESEVLSLREQLVH 435
Query: 184 FRSMLEK-VRQQSKNCRATQHELE 252
+S+LE R+ ++N R ELE
Sbjct: 436 LQSILESATREAAENARRVS-ELE 458
>Z83122-1|CAB05597.1| 293|Caenorhabditis elegans Hypothetical
protein R11A5.2 protein.
Length = 293
Score = 28.7 bits (61), Expect = 2.9
Identities = 23/91 (25%), Positives = 44/91 (48%)
Frame = +1
Query: 4 KLSDTRRQLERAIAGIEGPLHIVQECLYHREKRQGLEQVHDTVEQSLLKEVALLRECQDK 183
+L D + QL++A ++ + E + +++++ VE+ L +E + L E +
Sbjct: 44 ELDDLKTQLKKAETRVQ---QMTTEQIRNKDRQDDSRVQFAQVEEQLRRENSHLHEQCES 100
Query: 184 FRSMLEKVRQQSKNCRATQHELETDMRNKEY 276
R + K+ Q++ LET RNKEY
Sbjct: 101 QRERIRKLEQRND-------VLETSERNKEY 124
Score = 28.3 bits (60), Expect = 3.8
Identities = 19/73 (26%), Positives = 31/73 (42%)
Frame = +1
Query: 64 HIVQECLYHREKRQGLEQVHDTVEQSLLKEVALLRECQDKFRSMLEKVRQQSKNCRATQH 243
H+ ++C RE+ + LEQ +D +E S + L + K +EK+ Q
Sbjct: 93 HLHEQCESQRERIRKLEQRNDVLETSERNKEYLASDLGSKLDHAIEKIAMLESELYERQV 152
Query: 244 ELETDMRNKEYAL 282
E R +E L
Sbjct: 153 AAEEMHRLREEQL 165
>AL117202-20|CAB57898.4| 1205|Caenorhabditis elegans Hypothetical
protein Y47D3A.26 protein.
Length = 1205
Score = 28.7 bits (61), Expect = 2.9
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 5/91 (5%)
Frame = +1
Query: 1 EKLSDTRRQLERAIA-----GIEGPLHIVQECLYHREKRQGLEQVHDTVEQSLLKEVALL 165
+ +S QL R +A GI G +++E + + R G HD V V L
Sbjct: 489 QDISAANDQLRRIVARPVYNGITGVRKVIEE--FKHDNRNGQ---HDDVINGYYGTVIEL 543
Query: 166 RECQDKFRSMLEKVRQQSKNCRATQHELETD 258
E D FR+ +E + Q R H +ETD
Sbjct: 544 AEVPDMFRTAVEVIAQN----RLFYHVVETD 570
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 28.7 bits (61), Expect = 2.9
Identities = 25/89 (28%), Positives = 32/89 (35%), Gaps = 2/89 (2%)
Frame = +3
Query: 12 RHPPTAGASHRRH-RGASSHCPGVSLSPGEKTRFGASARHGGAVPPERGRLAARVPGQVS 188
RH +G+ RH G S SPG + G S H G GR +R
Sbjct: 290 RHGSCSGSPRGRHGHGGHGGHGSRSGSPGGRHGHGGSGHHRGGRHGGHGRHGSRSGSPGG 349
Query: 189 QHA*KGTAAVQELPRDATRAGDR-HAQQG 272
+H G P R G R H+ +G
Sbjct: 350 RHGHGGRHGPPHCPGRHGRHGSRSHSPRG 378
>Z83237-5|CAB54283.1| 91|Caenorhabditis elegans Hypothetical
protein R06B9.5 protein.
Length = 91
Score = 28.3 bits (60), Expect = 3.8
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = +3
Query: 24 TAGASHRRHRGASSHCPGVSLSPGEKTRFGASARHGGAVPPER 152
T H + +SL PGE + G ++ H G PP R
Sbjct: 9 TQDLPHETSEPSPKSASTLSLPPGESDQNGNTSSHEGVTPPRR 51
>U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical
protein F41H10.4 protein.
Length = 575
Score = 28.3 bits (60), Expect = 3.8
Identities = 13/53 (24%), Positives = 29/53 (54%)
Frame = +1
Query: 94 EKRQGLEQVHDTVEQSLLKEVALLRECQDKFRSMLEKVRQQSKNCRATQHELE 252
E+RQ +EQ+ + ++ ++V L +E + + + ++ +NC+ ELE
Sbjct: 125 EERQTVEQLKEAIKNLTDEKVLLCQETIPAISNKVTSLSEELENCQTLNVELE 177
>U53154-5|AAC25853.1| 347|Caenorhabditis elegans Hypothetical
protein C33G8.10 protein.
Length = 347
Score = 28.3 bits (60), Expect = 3.8
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -1
Query: 206 TFSSMLRNLSWHSRSKATSFRRDCSTVSCTCSK 108
T SS+ ++S S A RDCS +SCT SK
Sbjct: 80 TTSSLPGHISSISLLSARIVPRDCSNISCTVSK 112
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 27.9 bits (59), Expect = 5.0
Identities = 19/76 (25%), Positives = 27/76 (35%), Gaps = 2/76 (2%)
Frame = -2
Query: 292 SRSRAHTPCCACRSPARVASRGSSWTAAVPFQACCETCPGTLAA--RRPLSGGTAPPCRA 119
+RS + C C P +G+ P + PGT ++P T PPC+
Sbjct: 78 ARSTYNEQCAGCCLPGPQGPQGTPGKPGKPGKPGAPGQPGTPGRPPQQPCEPTTPPPCQP 137
Query: 118 LAPNLVFSPGDRDTPG 71
PG PG
Sbjct: 138 CPQGPPGPPGQPGIPG 153
>Z81473-6|CAB03895.2| 657|Caenorhabditis elegans Hypothetical
protein C17D12.7 protein.
Length = 657
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +1
Query: 133 EQSLLKEVALLRECQDKFRSMLEKVRQQSKNCRATQHELETDMRN 267
++SL KE+ L ++ + EK ++SKNC + +N
Sbjct: 143 QKSLFKEINLAKKLSASYSKKPEKTGEKSKNCTFSDSTFRLSSQN 187
>Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical
protein F20G4.3 protein.
Length = 2003
Score = 27.9 bits (59), Expect = 5.0
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +1
Query: 124 DTVEQS--LLKEVALLRECQDKFRSMLEKVRQQSKNCRATQHELETDMRNKE 273
D VE+S L+K A L + LEK +QQ N + ET +R ++
Sbjct: 1027 DEVERSKQLVKAKARLEATVAEINDELEKEKQQRHNAETARRAAETQLREEQ 1078
>Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical protein
F20G4.3 protein.
Length = 2003
Score = 27.9 bits (59), Expect = 5.0
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +1
Query: 124 DTVEQS--LLKEVALLRECQDKFRSMLEKVRQQSKNCRATQHELETDMRNKE 273
D VE+S L+K A L + LEK +QQ N + ET +R ++
Sbjct: 1027 DEVERSKQLVKAKARLEATVAEINDELEKEKQQRHNAETARRAAETQLREEQ 1078
>Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical
protein ZC373.7 protein.
Length = 297
Score = 27.9 bits (59), Expect = 5.0
Identities = 24/66 (36%), Positives = 29/66 (43%)
Frame = +3
Query: 54 GASSHCPGVSLSPGEKTRFGASARHGGAVPPERGRLAARVPGQVSQHA*KGTAAVQELPR 233
G++ H PG PG K GA GG P + GR PG+ Q KG+A P
Sbjct: 176 GSAGH-PGAPGQPGSKGNNGAPGAAGG--PGQPGR-----PGKDGQRG-KGSAGAPGAPG 226
Query: 234 DATRAG 251
A AG
Sbjct: 227 KAGPAG 232
>U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myosin
heavy chain II protein.
Length = 2003
Score = 27.9 bits (59), Expect = 5.0
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +1
Query: 124 DTVEQS--LLKEVALLRECQDKFRSMLEKVRQQSKNCRATQHELETDMRNKE 273
D VE+S L+K A L + LEK +QQ N + ET +R ++
Sbjct: 1027 DEVERSKQLVKAKARLEATVAEINDELEKEKQQRHNAETARRAAETQLREEQ 1078
>L16560-4|AAA27997.1| 111|Caenorhabditis elegans Hypothetical
protein D2007.1 protein.
Length = 111
Score = 27.9 bits (59), Expect = 5.0
Identities = 17/57 (29%), Positives = 22/57 (38%)
Frame = -1
Query: 272 SLLRMSVSSSCCVARQFLDCCRTFSSMLRNLSWHSRSKATSFRRDCSTVSCTCSKPC 102
S R V +S C A +CC + LRN + S R C C S+ C
Sbjct: 51 STSRCGVQASQCSA---YECCNFDQTCLRNRCFPRLSNCPVTRDQCGNACCKTSEQC 104
>AL032629-1|CAA21557.1| 399|Caenorhabditis elegans Hypothetical
protein Y102F5A.1 protein.
Length = 399
Score = 27.9 bits (59), Expect = 5.0
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +1
Query: 106 GLEQVHDTVEQSLLKEVALLRECQDKFRSMLEKVRQQSKNCRATQHELET 255
GL++ H TV+ +LKE ++ K R E++ + S+ CR T + T
Sbjct: 262 GLQRKHGTVDTPILKESEAQKKSIAK-RKRHERLLKASEWCRVTDEDKAT 310
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 27.5 bits (58), Expect = 6.7
Identities = 18/69 (26%), Positives = 22/69 (31%), Gaps = 2/69 (2%)
Frame = -2
Query: 268 CCACRSPARVASRGSSWTAAVPFQACCETCPGTLA--ARRPLSGGTAPPCRALAPNLVFS 95
C C +P G P + PG A P T PPC+
Sbjct: 113 CTGCCNPGPPGPGGRPGKPGTPGKPGAPGNPGASGKGAAAPCEPSTPPPCQPCPAGPPGP 172
Query: 94 PGDRDTPGQ 68
PG TPG+
Sbjct: 173 PGPDGTPGE 181
>U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical
protein C37C3.1 protein.
Length = 470
Score = 27.5 bits (58), Expect = 6.7
Identities = 25/90 (27%), Positives = 40/90 (44%)
Frame = +2
Query: 26 SWSEPSPASRGLFTLSRSVSITGRKDKVWSKCTTRWSSPS*KRSPCCESARTSFAACLKR 205
S S + S+ + SRS S++ K ++ +R S S R+P +R S + +R
Sbjct: 287 STSHSTSLSKRRYLRSRSRSLS----KSPARRRSRHLSRSGSRTPAQRHSRRSESTSRRR 342
Query: 206 YGSSPRTAARRNTSWRPTCATRSMRSGSTP 295
G R+ +R RP +RS TP
Sbjct: 343 SGRHSRSRSRSPPRKRPVRRSRSRSRSRTP 372
>U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily
assigned gene nameprotein 278 protein.
Length = 1130
Score = 27.5 bits (58), Expect = 6.7
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 8/99 (8%)
Frame = +1
Query: 1 EKLSDT-RRQLERAIAGIEGPLHIVQECLYHREKRQGLEQVHDTVEQSLLKEVALLRECQ 177
E+L +T +L RA + E L + LY +E LE + D + LKE L R Q
Sbjct: 259 ERLGETFEMKLRRAQSLYETEL-TAAKMLYTKE----LEALRD--HEEALKEELLAR--Q 309
Query: 178 DKFRSMLEKVRQQSK-------NCRATQHELETDMRNKE 273
D+F L++++ QSK +C+ LE + NKE
Sbjct: 310 DEFHDRLQELQLQSKRSREDLVSCKNDVTALEKKLHNKE 348
>AC024857-2|AAK31567.2| 463|Caenorhabditis elegans Hypothetical
protein Y71G12A.4 protein.
Length = 463
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/70 (22%), Positives = 30/70 (42%)
Frame = +1
Query: 19 RRQLERAIAGIEGPLHIVQECLYHREKRQGLEQVHDTVEQSLLKEVALLRECQDKFRSML 198
R +R A + + I + + H + + V D S + +++ RE + FR+
Sbjct: 395 REMWDRVEAFLGSRVGITRNWIEHLQSETSISVVPDFCSSSQV--ISMSRETAEHFRAKT 452
Query: 199 EKVRQQSKNC 228
+ QQ NC
Sbjct: 453 RDLEQQQSNC 462
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +1
Query: 112 EQVHDTVEQSLLKEVALLRECQDKFRSMLEKVRQQSKNCRATQHELETDMRNKEYA 279
EQ +DT ++ L+ + L + VR+Q CR +H+++ D K+YA
Sbjct: 1750 EQDYDTSMKAALENLKLEAPEMSSESDFEDFVREQEV-CRKCKHQVKRDKMEKQYA 1804
>Z82265-7|CAB05171.2| 425|Caenorhabditis elegans Hypothetical
protein F02H6.4 protein.
Length = 425
Score = 27.1 bits (57), Expect = 8.8
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 6/36 (16%)
Frame = +1
Query: 142 LLKEVALLRECQDKFRSML------EKVRQQSKNCR 231
L++ V LLREC+ KF + L EKVR++++ +
Sbjct: 376 LVESVVLLRECEKKFEAKLYLFRWNEKVRKKNRKLK 411
>Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 27.1 bits (57), Expect = 8.8
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +1
Query: 178 DKFRSMLEKVRQQSKNCRATQHELETDMRNKEYA 279
++FR + ++ +KNCR Q +L R+++ A
Sbjct: 155 EEFRELQRELELNAKNCRVLQFKLRKTERSRDQA 188
>Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 27.1 bits (57), Expect = 8.8
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +1
Query: 178 DKFRSMLEKVRQQSKNCRATQHELETDMRNKEYA 279
++FR + ++ +KNCR Q +L R+++ A
Sbjct: 155 EEFRELQRELELNAKNCRVLQFKLRKTERSRDQA 188
>Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 27.1 bits (57), Expect = 8.8
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +1
Query: 178 DKFRSMLEKVRQQSKNCRATQHELETDMRNKEYA 279
++FR + ++ +KNCR Q +L R+++ A
Sbjct: 155 EEFRELQRELELNAKNCRVLQFKLRKTERSRDQA 188
>Z48241-8|CAD44101.1| 589|Caenorhabditis elegans Hypothetical
protein C48D5.2c protein.
Length = 589
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Frame = -2
Query: 223 SWTAAVPFQACCETCPG---TLAARRPLSGGTAP 131
SWT P AC T PG + A+ RP+S G+ P
Sbjct: 39 SWT---PSMACTSTSPGIHASTASVRPVSSGSTP 69
>Z48241-7|CAA88287.1| 1026|Caenorhabditis elegans Hypothetical
protein C48D5.2a protein.
Length = 1026
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Frame = -2
Query: 223 SWTAAVPFQACCETCPG---TLAARRPLSGGTAP 131
SWT P AC T PG + A+ RP+S G+ P
Sbjct: 476 SWT---PSMACTSTSPGIHASTASVRPVSSGSTP 506
>Z48241-2|CAB54194.1| 624|Caenorhabditis elegans Hypothetical
protein C48D5.2b protein.
Length = 624
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Frame = -2
Query: 223 SWTAAVPFQACCETCPG---TLAARRPLSGGTAP 131
SWT P AC T PG + A+ RP+S G+ P
Sbjct: 74 SWT---PSMACTSTSPGIHASTASVRPVSSGSTP 104
>Z36237-4|CAD44107.1| 589|Caenorhabditis elegans Hypothetical
protein C48D5.2c protein.
Length = 589
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Frame = -2
Query: 223 SWTAAVPFQACCETCPG---TLAARRPLSGGTAP 131
SWT P AC T PG + A+ RP+S G+ P
Sbjct: 39 SWT---PSMACTSTSPGIHASTASVRPVSSGSTP 69
>Z36237-3|CAA85272.1| 1026|Caenorhabditis elegans Hypothetical
protein C48D5.2a protein.
Length = 1026
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Frame = -2
Query: 223 SWTAAVPFQACCETCPG---TLAARRPLSGGTAP 131
SWT P AC T PG + A+ RP+S G+ P
Sbjct: 476 SWT---PSMACTSTSPGIHASTASVRPVSSGSTP 506
>U41624-5|AAF99941.1| 314|Caenorhabditis elegans Collagen protein
174 protein.
Length = 314
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -2
Query: 145 GGTAPPCRALAPNLVFSPGDRDTPG 71
GG PP A AP +PG+ TPG
Sbjct: 203 GGQGPPGNAGAPGANGNPGNAGTPG 227
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 27.1 bits (57), Expect = 8.8
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +3
Query: 156 RLAARVPGQVSQHA*KGTAAVQELPRD--ATRAGDR 257
R+ A P +Q KGTA V++LPRD A R+ DR
Sbjct: 5773 RVIATNPSGTAQD--KGTATVKKLPRDSGARRSADR 5806
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 27.1 bits (57), Expect = 8.8
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +3
Query: 156 RLAARVPGQVSQHA*KGTAAVQELPRD--ATRAGDR 257
R+ A P +Q KGTA V++LPRD A R+ DR
Sbjct: 5133 RVIATNPSGTAQD--KGTATVKKLPRDSGARRSADR 5166
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 27.1 bits (57), Expect = 8.8
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +3
Query: 156 RLAARVPGQVSQHA*KGTAAVQELPRD--ATRAGDR 257
R+ A P +Q KGTA V++LPRD A R+ DR
Sbjct: 5773 RVIATNPSGTAQD--KGTATVKKLPRDSGARRSADR 5806
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 27.1 bits (57), Expect = 8.8
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +3
Query: 156 RLAARVPGQVSQHA*KGTAAVQELPRD--ATRAGDR 257
R+ A P +Q KGTA V++LPRD A R+ DR
Sbjct: 5773 RVIATNPSGTAQD--KGTATVKKLPRDSGARRSADR 5806
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 27.1 bits (57), Expect = 8.8
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +3
Query: 156 RLAARVPGQVSQHA*KGTAAVQELPRD--ATRAGDR 257
R+ A P +Q KGTA V++LPRD A R+ DR
Sbjct: 5133 RVIATNPSGTAQD--KGTATVKKLPRDSGARRSADR 5166
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 27.1 bits (57), Expect = 8.8
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +3
Query: 156 RLAARVPGQVSQHA*KGTAAVQELPRD--ATRAGDR 257
R+ A P +Q KGTA V++LPRD A R+ DR
Sbjct: 5773 RVIATNPSGTAQD--KGTATVKKLPRDSGARRSADR 5806
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.130 0.376
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,344,482
Number of Sequences: 27780
Number of extensions: 251652
Number of successful extensions: 1231
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 1090
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1231
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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