Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17e09
         (151 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   1.5  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    19   3.4  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    19   3.4  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    19   3.4  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     19   6.0  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    18   7.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    18   7.9  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    18   7.9  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 20.6 bits (41), Expect = 1.5
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = -1

Query: 124 FYSHYIISEYYTIIVVTDD 68
           FYS Y++++  T++   +D
Sbjct: 131 FYSAYLVADKVTVVSKNND 149


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 19.4 bits (38), Expect = 3.4
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -2

Query: 126 IFILIILFPNTIQLS*SLTTNGYYYS 49
           +FILI LF +  Q+  +L    +Y+S
Sbjct: 300 LFILIQLFNSLRQMKNNLERIYFYWS 325


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 19.4 bits (38), Expect = 3.4
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -2

Query: 126 IFILIILFPNTIQLS*SLTTNGYYYS 49
           +FILI LF +  Q+  +L    +Y+S
Sbjct: 300 LFILIQLFNSLRQMKNNLERIYFYWS 325


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 19.4 bits (38), Expect = 3.4
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -2

Query: 126 IFILIILFPNTIQLS*SLTTNGYYYS 49
           +FILI LF +  Q+  +L    +Y+S
Sbjct: 300 LFILIQLFNSLRQMKNNLERIYFYWS 325


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 18.6 bits (36), Expect = 6.0
 Identities = 5/13 (38%), Positives = 9/13 (69%)
 Frame = -1

Query: 49  YSTIRIGHPLYNK 11
           Y   ++ HP+Y+K
Sbjct: 432 YDFYKMNHPVYHK 444


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 18.2 bits (35), Expect = 7.9
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = -1

Query: 148  FFYGLISHFYSHYIISEYYTIIV 80
            FF GLIS  Y   +++ +  +++
Sbjct: 944  FFAGLISAIYGLIMMAVFVGVML 966


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 18.2 bits (35), Expect = 7.9
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = -1

Query: 148  FFYGLISHFYSHYIISEYYTIIV 80
            FF GLIS  Y   +++ +  +++
Sbjct: 944  FFAGLISAIYGLIMMAVFVGVML 966


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 18.2 bits (35), Expect = 7.9
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -2

Query: 126 IFILIILFPNTIQLS*SLTTNGYYYSIPL 40
           +FILI LF +  ++   L    +Y+S  L
Sbjct: 298 LFILIQLFNSLRRMRNDLERLYFYWSFAL 326


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,882
Number of Sequences: 336
Number of extensions: 583
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 30
effective length of database: 112,505
effective search space used:  2137595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)