Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17e09
         (151 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0384 - 2970369-2970726,2970812-2970882,2971428-2971509,297...    25   8.4  

>01_01_0384 -
           2970369-2970726,2970812-2970882,2971428-2971509,
           2971757-2971818,2972308-2972401,2972502-2972569,
           2972681-2972747,2972830-2972960,2973093-2973200,
           2973577-2973642,2973706-2973774,2973990-2974115,
           2974167-2974284,2974741-2974847,2975889-2976009,
           2976162-2976235,2976955-2977051,2977564-2977679,
           2978218-2978313,2978426-2978635,2979101-2979253
          Length = 797

 Score = 25.0 bits (52), Expect = 8.4
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = -1

Query: 130 SHFYSHYIISEYYTIIVVTDD*RILLFYSTIRI 32
           S  Y H ++SE Y+++  T    I+L  S +++
Sbjct: 335 SGIYQHLLVSELYSLLATTQK-HIMLVASVVKL 366


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,150,092
Number of Sequences: 37544
Number of extensions: 37277
Number of successful extensions: 66
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of database: 14,793,348
effective HSP length: 30
effective length of database: 13,667,028
effective search space used: 259673532
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)