Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17e09
         (151 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71185-7|CAA94907.2|  520|Caenorhabditis elegans Hypothetical pr...    28   1.0  
Z79600-6|CAB01879.2|  529|Caenorhabditis elegans Hypothetical pr...    26   3.2  
Z95559-16|CAB63365.3| 1440|Caenorhabditis elegans Hypothetical p...    25   7.3  

>Z71185-7|CAA94907.2|  520|Caenorhabditis elegans Hypothetical
           protein C35A5.5 protein.
          Length = 520

 Score = 27.9 bits (59), Expect = 1.0
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = -2

Query: 123 FILIILFPNTIQLS*SLTTNGYYYSIPLYGSDILYT 16
           FI+ I FPN  +++  L++  YY + P+Y   +  T
Sbjct: 38  FIIPIYFPNNDKMNLWLSSIKYYLTYPIYNESLTKT 73


>Z79600-6|CAB01879.2|  529|Caenorhabditis elegans Hypothetical
           protein F59C6.8 protein.
          Length = 529

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = -1

Query: 142 YGLISHFYSHYIISEYYTIIVVTDD*RILLFYSTIRIG 29
           YG   HFY   II++ + +I    + RI   +S IRIG
Sbjct: 205 YGAFMHFYVRSIITDLFKLIKDNKNTRISP-WSAIRIG 241


>Z95559-16|CAB63365.3| 1440|Caenorhabditis elegans Hypothetical
           protein Y41E3.9 protein.
          Length = 1440

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 71  VSDYDNCIVFGNNI 112
           +  Y+ C+VFGNN+
Sbjct: 98  MGSYEKCVVFGNNL 111


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,228,204
Number of Sequences: 27780
Number of extensions: 44774
Number of successful extensions: 136
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 136
length of database: 12,740,198
effective HSP length: 30
effective length of database: 11,906,798
effective search space used: 226229162
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)