Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17e05
         (502 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   1.8  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   1.8  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   3.1  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   5.5  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   7.2  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 143 IQSHRVWIMFLLCFGCI 93
           I SH+VW++ LL F  +
Sbjct: 3   IPSHQVWLVGLLAFSLV 19


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 143 IQSHRVWIMFLLCFGCI 93
           I SH+VW++ LL F  +
Sbjct: 3   IPSHQVWLVGLLAFSLV 19


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 15/51 (29%), Positives = 21/51 (41%)
 Frame = -3

Query: 305 PYLQSTNNLSRYLTKSLHILCSDRSRVMD*FRMNFLIDGESSTNSVQLLTR 153
           P + + N LS      L +LC  +   +   R    I+G S    VQL  R
Sbjct: 214 PSMDNINGLSTESKADLPLLCPAQGFPVPVHRWYKFIEGSSRRQPVQLNER 264


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 90  NNTTETQQKHYPNTMRL 140
           +  +E+  KHY N MRL
Sbjct: 363 HTASESFMKHYENEMRL 379


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +1

Query: 178  VELSPSIRKFIRN*SMTRLRSEQRMWRDLVRY 273
            VEL   +R ++R  +     +E+R W  L RY
Sbjct: 1172 VELDRELRPYLRTAAAILTWNEKRFWERL-RY 1202


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,475
Number of Sequences: 438
Number of extensions: 1889
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13741392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)