Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17e04
         (253 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    28   0.046
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            25   0.32 
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    23   1.3  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    22   3.0  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            21   6.9  
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    21   9.1  

>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 28.3 bits (60), Expect = 0.046
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -2

Query: 87  LQLVLNRLSDSTPGCDGIPYSFLINSKPI 1
           +Q++       TPG DGIP S LIN K +
Sbjct: 476 VQVLFGLKRSFTPGPDGIPASVLINCKDV 504


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 25.4 bits (53), Expect = 0.32
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -2

Query: 84   QLVLNRLSDSTPGCDGIPYSFLI 16
            QL+  ++++  P C+G PY+  I
Sbjct: 1758 QLLTGKVAELNPSCEGYPYTHTI 1780


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -2

Query: 87  LQLVLNRLSDSTPGCDGIPYSFLINS 10
           L  + N  S  +PG DGIP  F + +
Sbjct: 450 LYAIKNSQSRKSPGPDGIPKEFYLRA 475


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 5   GFELIKKE*GIPSHPGVESD 64
           G   +K + G+P  PGV+ D
Sbjct: 370 GLNGVKGDMGVPGFPGVKGD 389


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 51   PGCDGIPYS 25
            P C+G PYS
Sbjct: 1778 PSCEGFPYS 1786


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
           protein I protein.
          Length = 1340

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 63  SDSTPGCDGIPYSFLINSKPI 1
           S S P   G+P SFLI ++ +
Sbjct: 745 SVSVPPKVGVPISFLIKARKL 765


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 230,364
Number of Sequences: 2352
Number of extensions: 3720
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 53
effective length of database: 439,323
effective search space used: 13179690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)