Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17e04
         (253 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024215-1|ABC86277.1|  887|Drosophila melanogaster RE23733p pro...    26   8.0  
AY122192-1|AAM52704.1|  386|Drosophila melanogaster LD44515p pro...    26   8.0  
AE014296-1767|AAN11938.2|  887|Drosophila melanogaster CG6718-PD...    26   8.0  
AE014296-1766|AAN11937.2|  887|Drosophila melanogaster CG6718-PC...    26   8.0  
AE014296-1765|AAN11936.2|  887|Drosophila melanogaster CG6718-PB...    26   8.0  
AE014296-1764|AAF50194.3|  877|Drosophila melanogaster CG6718-PA...    26   8.0  

>BT024215-1|ABC86277.1|  887|Drosophila melanogaster RE23733p
           protein.
          Length = 887

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 119 GRMANQAKAWNKIFSIPLFSFSEE 190
           GR+ ++A+AW     IP F F+ +
Sbjct: 823 GRVVDRARAWCSTIGIPYFRFNPQ 846


>AY122192-1|AAM52704.1|  386|Drosophila melanogaster LD44515p
           protein.
          Length = 386

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 119 GRMANQAKAWNKIFSIPLFSFSEE 190
           GR+ ++A+AW     IP F F+ +
Sbjct: 322 GRVVDRARAWCSTIGIPYFRFNPQ 345


>AE014296-1767|AAN11938.2|  887|Drosophila melanogaster CG6718-PD,
           isoform D protein.
          Length = 887

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 119 GRMANQAKAWNKIFSIPLFSFSEE 190
           GR+ ++A+AW     IP F F+ +
Sbjct: 823 GRVVDRARAWCSTIGIPYFRFNPQ 846


>AE014296-1766|AAN11937.2|  887|Drosophila melanogaster CG6718-PC,
           isoform C protein.
          Length = 887

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 119 GRMANQAKAWNKIFSIPLFSFSEE 190
           GR+ ++A+AW     IP F F+ +
Sbjct: 823 GRVVDRARAWCSTIGIPYFRFNPQ 846


>AE014296-1765|AAN11936.2|  887|Drosophila melanogaster CG6718-PB,
           isoform B protein.
          Length = 887

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 119 GRMANQAKAWNKIFSIPLFSFSEE 190
           GR+ ++A+AW     IP F F+ +
Sbjct: 823 GRVVDRARAWCSTIGIPYFRFNPQ 846


>AE014296-1764|AAF50194.3|  877|Drosophila melanogaster CG6718-PA,
           isoform A protein.
          Length = 877

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 119 GRMANQAKAWNKIFSIPLFSFSEE 190
           GR+ ++A+AW     IP F F+ +
Sbjct: 813 GRVVDRARAWCSTIGIPYFRFNPQ 836


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,792,831
Number of Sequences: 53049
Number of extensions: 149239
Number of successful extensions: 238
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 238
length of database: 24,988,368
effective HSP length: 63
effective length of database: 21,646,281
effective search space used: 432925620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)