Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17d22
         (577 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    27   0.44 
AY062207-1|AAL58568.1|  504|Anopheles gambiae cytochrome P450 CY...    24   4.1  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    23   7.1  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    23   9.4  

>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1049

 Score = 27.1 bits (57), Expect = 0.44
 Identities = 18/79 (22%), Positives = 35/79 (44%)
 Frame = -2

Query: 246  KQRSRKLWESYWKLCSKHKGSWYAEIQKELPSKPWYDKYKGAKERKFIIIINRLRFGHCQ 67
            +Q S + W++ W   +   G W   +  ++ +  W D+  G  +      + ++  GH  
Sbjct: 904  RQASMRQWQNEWS--NSLNGRWTYLLIPDVGA--WLDRKHGDVD----YFVTQVLSGHGC 955

Query: 66   TPSHLFRFKIIDNNRCTYC 10
              S+L RF    ++RC  C
Sbjct: 956  FRSYLHRFNRASSSRCPAC 974


>AY062207-1|AAL58568.1|  504|Anopheles gambiae cytochrome P450
           CYP6S2 protein.
          Length = 504

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = +3

Query: 459 LKPLTHFLNLILLRTPCYHFVNFIQSRVYIFVKYKG-YTG 575
           L+P   F N+I +  P  HF + IQ ++Y  +K +G Y G
Sbjct: 35  LEPTFPFGNMIDIFNPNIHFAHLIQ-KLYRQLKDRGDYVG 73


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 10/38 (26%), Positives = 19/38 (50%)
 Frame = +3

Query: 108 IYVPWLLYIYHTMAYLEVLFGFLHTNCLYALSIISNSF 221
           ++  W L+    +  +E L  FLHT  L+ +  +S  +
Sbjct: 789 VFGAWSLFTLAILVMMEGLSAFLHTLRLHWVEFMSKFY 826


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 10/38 (26%), Positives = 19/38 (50%)
 Frame = +3

Query: 108 IYVPWLLYIYHTMAYLEVLFGFLHTNCLYALSIISNSF 221
           ++ PW +     +  +E L  FLHT  L+ +  +S  +
Sbjct: 749 VFWPWSVLTIGILVGMEGLSAFLHTLRLHWVEFMSKFY 786


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 577,736
Number of Sequences: 2352
Number of extensions: 10891
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54665910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)