Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte17d22
(577 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 49 4e-06
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 42 8e-04
Y08160-1|CAA69352.1| 1745|Drosophila melanogaster dilute class u... 31 1.1
BT010003-1|AAQ22472.1| 1401|Drosophila melanogaster RE30195p pro... 31 1.1
AF003826-1|AAC99496.1| 1792|Drosophila melanogaster myosin V pro... 31 1.1
AE013599-435|AAM68903.1| 1196|Drosophila melanogaster CG2146-PB,... 31 1.1
AE013599-434|AAF59241.2| 1792|Drosophila melanogaster CG2146-PA,... 31 1.1
AE013599-433|AAM68902.1| 1800|Drosophila melanogaster CG2146-PC,... 31 1.1
AE013599-1248|AAF58685.2| 138|Drosophila melanogaster CG9067-PA... 30 2.0
AF032921-1|AAC47810.1| 333|Drosophila melanogaster ribonuclease... 29 3.4
BT016044-1|AAV36929.1| 669|Drosophila melanogaster LP20373p pro... 29 6.0
AY118341-1|AAM48370.1| 543|Drosophila melanogaster LD44641p pro... 29 6.0
AE014297-3459|AAF56236.1| 662|Drosophila melanogaster CG13605-P... 29 6.0
AY129451-1|AAM76193.1| 787|Drosophila melanogaster RE01517p pro... 28 7.9
AE014298-1891|AAF48260.1| 787|Drosophila melanogaster CG10617-P... 28 7.9
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 49.2 bits (112), Expect = 4e-06
Identities = 49/174 (28%), Positives = 65/174 (37%), Gaps = 2/174 (1%)
Frame = -2
Query: 519 QNDNMEFLIISDSKSVLMALDKCHIHYRNNYLLYKIREALTSLDTPVTFKWVPSHRGIKG 340
+N +F+I SDS L A+D N++ +IR +T + W+P H GIKG
Sbjct: 1000 KNRRGKFIICSDS---LSAVDSIQNTNNNSFYPSRIRSLITQHAPKIKIMWIPGHSGIKG 1056
Query: 339 NEIVDGIVNSNYDEDHTNSCRVPFTDFLFDLKQRSRKLWESYWKLCSKHKGSWYAEIQKE 160
NE+ D S + + TD LK + + CS WY I
Sbjct: 1057 NELADQAAKSASSMPLILTPNINTTDIKKHLKADLATKQKEHIINCS----PWYQSINTN 1112
Query: 159 LPSKPWYDKYKGAK-ERKFIIIINRLRFGHCQ-TPSHLFRFKIIDNNRCTYCGG 4
Y K R I I RLR GH T H I C +C G
Sbjct: 1113 TSHPCDYLKQSHPNWTRLDQIKIIRLRLGHTNITHQHYLNPNSIPT--CPFCQG 1164
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 41.5 bits (93), Expect = 8e-04
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = -2
Query: 498 LIISDSKSVLMALDKCHIHYRNNYLLYKIREALTSLDTPVTFKWVPSHRGIKGNEIVD 325
+I +DS S L A+ + N+ ++R L+S +T WVPSH+GI GNE+ D
Sbjct: 1022 VICTDSLSSLSAIRNWN---HNDPTTQEVRHILSSHPKKITLLWVPSHQGIHGNELAD 1076
>Y08160-1|CAA69352.1| 1745|Drosophila melanogaster dilute class
unconventional myosin protein.
Length = 1745
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = -2
Query: 321 IVNSNYDEDHTNSCRVPFTDFLFDLKQRSRKLWESYWKLCSKHK 190
+++ NY + + S V L + KQ+ + L E Y KL S+HK
Sbjct: 1089 LLSKNYSYNDSTSLVVKLRSILEEEKQKHKVLQEQYIKLSSRHK 1132
>BT010003-1|AAQ22472.1| 1401|Drosophila melanogaster RE30195p protein.
Length = 1401
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = -2
Query: 321 IVNSNYDEDHTNSCRVPFTDFLFDLKQRSRKLWESYWKLCSKHK 190
+++ NY + + S V L + KQ+ + L E Y KL S+HK
Sbjct: 1144 LLSKNYSYNDSTSLVVKLRSILEEEKQKHKVLQEQYIKLSSRHK 1187
>AF003826-1|AAC99496.1| 1792|Drosophila melanogaster myosin V protein.
Length = 1792
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = -2
Query: 321 IVNSNYDEDHTNSCRVPFTDFLFDLKQRSRKLWESYWKLCSKHK 190
+++ NY + + S V L + KQ+ + L E Y KL S+HK
Sbjct: 1136 LLSKNYSYNDSTSLVVKLRSILEEEKQKHKVLQEQYIKLSSRHK 1179
>AE013599-435|AAM68903.1| 1196|Drosophila melanogaster CG2146-PB,
isoform B protein.
Length = 1196
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = -2
Query: 321 IVNSNYDEDHTNSCRVPFTDFLFDLKQRSRKLWESYWKLCSKHK 190
+++ NY + + S V L + KQ+ + L E Y KL S+HK
Sbjct: 1136 LLSKNYSYNDSTSLVVKLRSILEEEKQKHKVLQEQYIKLSSRHK 1179
>AE013599-434|AAF59241.2| 1792|Drosophila melanogaster CG2146-PA,
isoform A protein.
Length = 1792
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = -2
Query: 321 IVNSNYDEDHTNSCRVPFTDFLFDLKQRSRKLWESYWKLCSKHK 190
+++ NY + + S V L + KQ+ + L E Y KL S+HK
Sbjct: 1136 LLSKNYSYNDSTSLVVKLRSILEEEKQKHKVLQEQYIKLSSRHK 1179
>AE013599-433|AAM68902.1| 1800|Drosophila melanogaster CG2146-PC,
isoform C protein.
Length = 1800
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = -2
Query: 321 IVNSNYDEDHTNSCRVPFTDFLFDLKQRSRKLWESYWKLCSKHK 190
+++ NY + + S V L + KQ+ + L E Y KL S+HK
Sbjct: 1144 LLSKNYSYNDSTSLVVKLRSILEEEKQKHKVLQEQYIKLSSRHK 1187
>AE013599-1248|AAF58685.2| 138|Drosophila melanogaster CG9067-PA
protein.
Length = 138
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = -2
Query: 576 ILYNLYTSQIYRHVTE*SLQNDNMEFLIISDSKSVLMALDKCHIHYRNNYLLY 418
+LY+ +IY VT N ++F+++ DS +V + ++ +RN +LLY
Sbjct: 59 LLYSTENHKIYGFVT-----NTRVKFIVVIDSSNVALRENEVRAIFRNLHLLY 106
>AF032921-1|AAC47810.1| 333|Drosophila melanogaster ribonuclease H1
protein.
Length = 333
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/24 (50%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
Frame = -2
Query: 390 DTPVTFKW--VPSHRGIKGNEIVD 325
D +T KW V +H+GI+GNE+ D
Sbjct: 295 DNNITVKWNYVEAHKGIEGNEMAD 318
>BT016044-1|AAV36929.1| 669|Drosophila melanogaster LP20373p
protein.
Length = 669
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +3
Query: 432 YFYSEYDICLKPLTHFLNLILLRTPCYHFVNF-IQSRVYIFVKY 560
Y+ + D+ +K LT + LI+ P +H + +++R+Y+ V+Y
Sbjct: 487 YYIAVSDLIIKLLTMLVKLIITMLP-HHLMRLKVRARLYVLVEY 529
>AY118341-1|AAM48370.1| 543|Drosophila melanogaster LD44641p
protein.
Length = 543
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +3
Query: 432 YFYSEYDICLKPLTHFLNLILLRTPCYHFVNF-IQSRVYIFVKY 560
Y+ + D+ +K LT + LI+ P +H + +++R+Y+ V+Y
Sbjct: 361 YYIAVSDLIIKLLTMLVKLIITMLP-HHLMRLKVRARLYVLVEY 403
>AE014297-3459|AAF56236.1| 662|Drosophila melanogaster CG13605-PA
protein.
Length = 662
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +3
Query: 432 YFYSEYDICLKPLTHFLNLILLRTPCYHFVNF-IQSRVYIFVKY 560
Y+ + D+ +K LT + LI+ P +H + +++R+Y+ V+Y
Sbjct: 487 YYIAVSDLIIKLLTMLVKLIITMLP-HHLMRLKVRARLYVLVEY 529
>AY129451-1|AAM76193.1| 787|Drosophila melanogaster RE01517p
protein.
Length = 787
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 405 ALTSLDTPVTFKWVPSHRGIKGNEIVDGIVNSNYDE 298
++ SLDT V VP H G ++V G + +Y+E
Sbjct: 518 SVESLDTFVRIYLVPDHPGAMQTKVVKGTLTPSYNE 553
>AE014298-1891|AAF48260.1| 787|Drosophila melanogaster CG10617-PA
protein.
Length = 787
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 405 ALTSLDTPVTFKWVPSHRGIKGNEIVDGIVNSNYDE 298
++ SLDT V VP H G ++V G + +Y+E
Sbjct: 518 SVESLDTFVRIYLVPDHPGAMQTKVVKGTLTPSYNE 553
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,098,409
Number of Sequences: 53049
Number of extensions: 476367
Number of successful extensions: 950
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 950
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2276053890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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