Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17d18
         (609 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    26   0.33 
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    23   3.1  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   7.1  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   9.4  

>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 25.8 bits (54), Expect = 0.33
 Identities = 12/54 (22%), Positives = 20/54 (37%)
 Frame = +1

Query: 340 EPLRFPNLVTGFDRSPEHAARAALYTRYTQYEWNQNTIKNYNESDAKRNFSERV 501
           E  R P +++       H         Y  Y +N N   NY +     N+ E++
Sbjct: 74  ERSREPKIISSLSNKTIHNNNNYNNNNYNNYNYNNNNYNNYKKLYYNINYIEQI 127


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -3

Query: 223 FLVNGNNSPLVAGHWDLLLSPLLDSI 146
           F +NG +  L +G + + LSPL  ++
Sbjct: 238 FTINGESFTLQSGIFGMALSPLTQNL 263


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +1

Query: 451 IKNYNESDAKRN 486
           I+N+NES+ +RN
Sbjct: 366 IRNFNESENRRN 377


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 340 EPLRFPNLVTGFDRSPEHAARA 405
           EP+ F ++V G   +P H  RA
Sbjct: 457 EPIYFHSIVLGSLLNPSHMYRA 478


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,737
Number of Sequences: 438
Number of extensions: 4402
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17971191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)