Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17d14
         (475 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41263-8|AAC24430.1|  455|Caenorhabditis elegans Hypothetical pr...    28   3.0  
U23484-9|AAC46771.1|  304|Caenorhabditis elegans Hypothetical pr...    27   9.1  

>U41263-8|AAC24430.1|  455|Caenorhabditis elegans Hypothetical
           protein T19D12.10 protein.
          Length = 455

 Score = 28.3 bits (60), Expect = 3.0
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = -2

Query: 240 RSVL*F*AAFSSISTLQKPCAVCNIFFPHIESNVIR 133
           R+VL F +  SSI+TL  P AV   +FP I + VI+
Sbjct: 94  RNVLAFYSCSSSIATLLMPLAVSFGYFPVIIARVIQ 129


>U23484-9|AAC46771.1|  304|Caenorhabditis elegans Hypothetical
           protein EEED8.11 protein.
          Length = 304

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 14/36 (38%), Positives = 15/36 (41%)
 Frame = -2

Query: 354 DDATGAMPAKA*TVQTSASCPTVENTQNNSTTPPRT 247
           DD T   P    T  TS S PT   T   +TT   T
Sbjct: 47  DDCTTKPPKSTSTPSTSTSTPTTTTTTTTTTTTTPT 82


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,187,810
Number of Sequences: 27780
Number of extensions: 155830
Number of successful extensions: 457
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 457
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 860942358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)