Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte17d07
(661 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39676-5|AAN60531.1| 2329|Caenorhabditis elegans Hypothetical pr... 34 0.10
U39676-4|AAN60532.1| 2747|Caenorhabditis elegans Hypothetical pr... 34 0.10
U42830-4|AAC48277.1| 487|Caenorhabditis elegans Neuronal igcam ... 32 0.31
U53153-2|AAQ91899.1| 422|Caenorhabditis elegans Hypothetical pr... 31 0.72
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 31 0.72
Z72515-2|CAA96682.3| 329|Caenorhabditis elegans Hypothetical pr... 30 1.7
U38377-3|AAA79748.1| 652|Caenorhabditis elegans Cohesin family ... 29 2.2
AC084155-5|AAK84606.1| 433|Caenorhabditis elegans Hypothetical ... 29 2.2
AL032654-10|CAB63391.1| 819|Caenorhabditis elegans Hypothetical... 29 3.9
Z67734-1|CAA91527.2| 279|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z81491-4|CAB04017.1| 252|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 28 6.8
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 28 6.8
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 28 6.8
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 28 6.8
AF292048-1|AAG41144.1| 133|Caenorhabditis elegans 3A339 protein. 28 6.8
AF099913-14|AAC68745.1| 133|Caenorhabditis elegans Hypothetical... 28 6.8
Z50177-1|CAA90543.2| 607|Caenorhabditis elegans Hypothetical pr... 27 8.9
L12018-5|AAU87822.1| 557|Caenorhabditis elegans Twik family of ... 27 8.9
>U39676-5|AAN60531.1| 2329|Caenorhabditis elegans Hypothetical protein
C23F12.1a protein.
Length = 2329
Score = 33.9 bits (74), Expect = 0.10
Identities = 25/107 (23%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Frame = +2
Query: 212 QRPQEQPTQKEKTGFNRSSRAPESKCKEGISDKVPYNPKITNLESL--LADISVRYIQLK 385
Q +++ +KE+ + RA K K+ S + P ++ + SL + S +++
Sbjct: 1116 QEKEKKREEKERAKREKEERATLKKEKKSKSHRFPAKTTVSKIPSLSRVGQPSSLVVEVS 1175
Query: 386 ESDFELHYKVLDTIFQNLHKKMKEIDPYYNRYSSTVHHAGSHYDNVR 526
D +L +VLD+ + + EI+P + + + T G H +VR
Sbjct: 1176 GHD-QLEIRVLDSKKSEIGTDIVEIEPGHMQINFTPAQVGDHEIDVR 1221
>U39676-4|AAN60532.1| 2747|Caenorhabditis elegans Hypothetical protein
C23F12.1b protein.
Length = 2747
Score = 33.9 bits (74), Expect = 0.10
Identities = 25/107 (23%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Frame = +2
Query: 212 QRPQEQPTQKEKTGFNRSSRAPESKCKEGISDKVPYNPKITNLESL--LADISVRYIQLK 385
Q +++ +KE+ + RA K K+ S + P ++ + SL + S +++
Sbjct: 1116 QEKEKKREEKERAKREKEERATLKKEKKSKSHRFPAKTTVSKIPSLSRVGQPSSLVVEVS 1175
Query: 386 ESDFELHYKVLDTIFQNLHKKMKEIDPYYNRYSSTVHHAGSHYDNVR 526
D +L +VLD+ + + EI+P + + + T G H +VR
Sbjct: 1176 GHD-QLEIRVLDSKKSEIGTDIVEIEPGHMQINFTPAQVGDHEIDVR 1221
>U42830-4|AAC48277.1| 487|Caenorhabditis elegans Neuronal igcam
protein 3 protein.
Length = 487
Score = 32.3 bits (70), Expect = 0.31
Identities = 23/88 (26%), Positives = 39/88 (44%)
Frame = +2
Query: 356 DISVRYIQLKESDFELHYKVLDTIFQNLHKKMKEIDPYYNRYSSTVHHAGSHYDNVRINK 535
D+++ L E FE V T+ N H + I V H ++ + I
Sbjct: 238 DVNIEVYTLPE--FETEESVQYTVIDN-HVRDAIIYCNVTHSFPPVRHYTFYHGDEEIKM 294
Query: 536 PDEFDMVIEIGVPLCFHEKTNNRNESDI 619
D+F++ + +GV H K +N NE+D+
Sbjct: 295 SDKFNIFVNVGVSQGAHLKIHNVNENDL 322
>U53153-2|AAQ91899.1| 422|Caenorhabditis elegans Hypothetical
protein T19A5.3b protein.
Length = 422
Score = 31.1 bits (67), Expect = 0.72
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +2
Query: 398 ELHYKVLDTIFQNLHKKMKEID-PYYNRYSSTVHHAGSHYDNVRINKPDEFDMVIEIGVP 574
E K ++ ++ L K I+ P N SS H+G HY ++N P + + ++E+ P
Sbjct: 61 EARRKRIEARWKRLGINFKTINHPLLNTESSESSHSGHHYTIRQLNAPKKVEKLVEVERP 120
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical
protein T19A5.3a protein.
Length = 715
Score = 31.1 bits (67), Expect = 0.72
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +2
Query: 398 ELHYKVLDTIFQNLHKKMKEID-PYYNRYSSTVHHAGSHYDNVRINKPDEFDMVIEIGVP 574
E K ++ ++ L K I+ P N SS H+G HY ++N P + + ++E+ P
Sbjct: 129 EARRKRIEARWKRLGINFKTINHPLLNTESSESSHSGHHYTIRQLNAPKKVEKLVEVERP 188
>Z72515-2|CAA96682.3| 329|Caenorhabditis elegans Hypothetical
protein T11A5.2 protein.
Length = 329
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = -1
Query: 610 LVSIICFLVEAKRHTYFDNHVEFIGFVYTHIVVVTPGMMYRARISVVVWIYF 455
L++I+ FL+ A + + F G V + V TP Y A++ V I F
Sbjct: 146 LLAIVHFLIAALPLCFLYSQTRFDGAVMYYCVTATPSAPYSAQVGATVSICF 197
>U38377-3|AAA79748.1| 652|Caenorhabditis elegans Cohesin family
protein 1 protein.
Length = 652
Score = 29.5 bits (63), Expect = 2.2
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -2
Query: 261 LLKPVFSFCVGCSCGRCGC 205
++ P F C+ C RCGC
Sbjct: 34 IVSPSFPICIAAKCSRCGC 52
>AC084155-5|AAK84606.1| 433|Caenorhabditis elegans Hypothetical
protein Y45G5AM.7 protein.
Length = 433
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/88 (22%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = +2
Query: 362 SVRYIQLKESDFELHYKVLDTIFQNLHKK-MKEIDPYYNRYSSTVHHAGSHYDNVRINKP 538
S I+L + + E + K ++ +N ++ KE+D + ++S+TV+H + + +
Sbjct: 252 STEKIELIQKEAEDYRKRIEEDIRNRQQRHKKEVDAHQEKFSATVNHQNAVIEELTQTVK 311
Query: 539 DEFDMVIEIGVPLCFHEKTNNRNESDIK 622
+ + E+ L EK +R + D+K
Sbjct: 312 QKQSEIAELKDQL---EKQESRIKGDLK 336
>AL032654-10|CAB63391.1| 819|Caenorhabditis elegans Hypothetical
protein Y52B11A.10 protein.
Length = 819
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +2
Query: 299 ISDKVPYNPKITNLESLLADISVRYIQLKESDFELHYKVLDTIFQNLHKK 448
I DK+ N +TNL ++ I+ Y LK++ + L + +D I KK
Sbjct: 458 IIDKLAENLNLTNLFAIRTLIAYAYKSLKKTSWPLVTQKIDEIHSEFEKK 507
>Z67734-1|CAA91527.2| 279|Caenorhabditis elegans Hypothetical
protein B0198.1 protein.
Length = 279
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 506 SRHDVPCSNICCSMDLFLSFSCEDFGILYLAL 411
+R CS C LF+S+ GIL+LAL
Sbjct: 14 NRRSGSCSGCCSKCQLFISYLLVIVGILFLAL 45
>Z81491-4|CAB04017.1| 252|Caenorhabditis elegans Hypothetical
protein D1086.4 protein.
Length = 252
Score = 27.9 bits (59), Expect = 6.8
Identities = 26/141 (18%), Positives = 63/141 (44%)
Frame = +2
Query: 236 QKEKTGFNRSSRAPESKCKEGISDKVPYNPKITNLESLLADISVRYIQLKESDFELHYKV 415
++ KT + R+ + I+D + P+ ++ + R+ L + + + +V
Sbjct: 17 EQRKTVGRIAGRSQNRNTSKKIADGPYFLPRYRIRDNAERSVGARFKSLPQKEQD---EV 73
Query: 416 LDTIFQNLHKKMKEIDPYYNRYSSTVHHAGSHYDNVRINKPDEFDMVIEIGVPLCFHEKT 595
++ F NL + +K+ +P+Y + + A S Y +KP E + ++ +++
Sbjct: 74 VNEAFSNLREYLKKREPFY----AKLRKANSKYS----SKPKEREKSVD------SNDEA 119
Query: 596 NNRNESDIKFETQTCRLCSTE 658
+ RN+ + K + + C E
Sbjct: 120 DRRNKGNKKTQKNASKNCQIE 140
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 27.9 bits (59), Expect = 6.8
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -2
Query: 237 CVGCSCGRCGC 205
C GC CG CGC
Sbjct: 65 CCGCGCGCCGC 75
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 27.9 bits (59), Expect = 6.8
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -2
Query: 237 CVGCSCGRCGC 205
C GC CG CGC
Sbjct: 65 CCGCGCGCCGC 75
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 27.9 bits (59), Expect = 6.8
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -2
Query: 237 CVGCSCGRCGC 205
C GC CG CGC
Sbjct: 66 CCGCGCGCCGC 76
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 27.9 bits (59), Expect = 6.8
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -2
Query: 237 CVGCSCGRCGC 205
C GC CG CGC
Sbjct: 67 CCGCGCGCCGC 77
Score = 27.9 bits (59), Expect = 6.8
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -2
Query: 237 CVGCSCGRCGC 205
C GC CG CGC
Sbjct: 120 CCGCGCGCCGC 130
>AF292048-1|AAG41144.1| 133|Caenorhabditis elegans 3A339 protein.
Length = 133
Score = 27.9 bits (59), Expect = 6.8
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 8/84 (9%)
Frame = +2
Query: 233 TQKEKTGFNRSSRAPESKCKEGISDKVPYNPKITNLESLLADISVRYIQLKESDF----- 397
T E++ NR + PE + P+N +I+ + R + +KE +F
Sbjct: 19 TAIEESPRNRQNEEPEQTSQTENLQTDPFNARISEIFEKQTVAFERQMMIKEEEFMSQMK 78
Query: 398 ---ELHYKVLDTIFQNLHKKMKEI 460
E+ K L+T +N K KEI
Sbjct: 79 EREEVKLKDLETKLENFEKWRKEI 102
>AF099913-14|AAC68745.1| 133|Caenorhabditis elegans Hypothetical
protein C29F9.2 protein.
Length = 133
Score = 27.9 bits (59), Expect = 6.8
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 8/84 (9%)
Frame = +2
Query: 233 TQKEKTGFNRSSRAPESKCKEGISDKVPYNPKITNLESLLADISVRYIQLKESDF----- 397
T E++ NR + PE + P+N +I+ + R + +KE +F
Sbjct: 19 TAIEESPRNRQNEEPEQTSQTENLQTDPFNARISEIFEKQTVAFERQMMIKEEEFMSQMK 78
Query: 398 ---ELHYKVLDTIFQNLHKKMKEI 460
E+ K L+T +N K KEI
Sbjct: 79 EREEVKLKDLETKLENFEKWRKEI 102
>Z50177-1|CAA90543.2| 607|Caenorhabditis elegans Hypothetical
protein F46G10.2 protein.
Length = 607
Score = 27.5 bits (58), Expect = 8.9
Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +2
Query: 329 ITNLESLLADISVRYIQLKESDFELHYKVLDTIFQNLHKKMKEIDPYYNRYSSTVHHAGS 508
IT + L+ DI + + + E+ +H++ D+I + K D + SS H+G
Sbjct: 518 ITIADPLVIDIPIEDVAIPEN-VPIHHESCDSIDSRNNSKTHSTDSGVSSLSSNSSHSGG 576
Query: 509 HYDNVRINKPDEF-DMVIE 562
+ + P D+ IE
Sbjct: 577 DNETLTSGMPTHLRDLNIE 595
>L12018-5|AAU87822.1| 557|Caenorhabditis elegans Twik family of
potassium channelsprotein 7 protein.
Length = 557
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 479 YSSTVHHAGSHYDNV-RINKPDEFDMVIEIGVPLCFHEK 592
Y+ST HH G YD+ + + + D V EI P FH +
Sbjct: 41 YASTYHHVGVEYDSYEELERHEMDDRVTEI--PEGFHRR 77
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,417,000
Number of Sequences: 27780
Number of extensions: 276196
Number of successful extensions: 1147
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1143
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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