Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte17d02
(692 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock prot... 86 2e-17
U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock prot... 86 2e-17
L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock pro... 81 1e-15
M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein ( C.ele... 76 2e-14
Z81125-8|CAB03380.1| 109|Caenorhabditis elegans Hypothetical pr... 75 5e-14
K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock prot... 75 6e-14
U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock prot... 74 8e-14
U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock prot... 73 1e-13
U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock prot... 73 1e-13
K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock prot... 73 1e-13
AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock pr... 73 1e-13
X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C. el... 73 3e-13
X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal frag... 73 3e-13
U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock prot... 73 3e-13
U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock prot... 73 3e-13
K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock prot... 73 3e-13
K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock prot... 72 3e-13
U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock prot... 70 2e-12
U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock prot... 70 2e-12
U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock prot... 70 2e-12
M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein ( C.ele... 70 2e-12
AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock pr... 70 2e-12
Z81125-9|CAL64006.1| 112|Caenorhabditis elegans Hypothetical pr... 69 3e-12
EF035034-1|ABK34454.1| 112|Caenorhabditis elegans heat-shock pr... 69 3e-12
Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical pr... 68 6e-12
AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical ... 68 6e-12
Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical pr... 68 7e-12
Z47357-12|CAA87429.2| 205|Caenorhabditis elegans Hypothetical p... 62 4e-10
Z30974-3|CAA83227.2| 205|Caenorhabditis elegans Hypothetical pr... 62 4e-10
Z68342-8|CAA92771.1| 110|Caenorhabditis elegans Hypothetical pr... 61 6e-10
U92044-1|AAC47521.1| 110|Caenorhabditis elegans heat shock prot... 61 6e-10
Z68342-1|CAA92770.1| 109|Caenorhabditis elegans Hypothetical pr... 61 8e-10
Z77657-2|CAB01146.1| 147|Caenorhabditis elegans Hypothetical pr... 54 1e-07
M31339-1|AAA28072.1| 22|Caenorhabditis elegans hsp16-48 protein. 30 1.8
AC084197-36|AAG23464.2| 381|Caenorhabditis elegans Hypothetical... 30 1.8
AY081955-1|AAL92523.1| 788|Caenorhabditis elegans MAT-1 protein. 29 3.2
AC006708-13|AAF60415.1| 788|Caenorhabditis elegans Metaphase-to... 29 3.2
Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical p... 29 4.2
Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z81524-4|CAB04250.1| 528|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p... 28 5.5
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z68752-7|CAA92982.2| 693|Caenorhabditis elegans Hypothetical pr... 28 5.5
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein. 28 5.5
U61946-10|AAC24388.1| 1827|Caenorhabditis elegans Hypothetical p... 28 7.3
AL117195-25|CAB55036.1| 1048|Caenorhabditis elegans Hypothetical... 28 7.3
Z81522-5|CAD98731.1| 663|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z81522-4|CAB04233.1| 771|Caenorhabditis elegans Hypothetical pr... 27 9.6
>U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock protein
protein 17,isoform a protein.
Length = 149
Score = 86.2 bits (204), Expect = 2e-17
Identities = 43/120 (35%), Positives = 68/120 (56%), Gaps = 4/120 (3%)
Frame = +3
Query: 201 RDYYRPW--KQMAMANRDVGSTI--TSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGK 368
R RP+ Q + VG I +N ++ V++DV F PEE+ V D +I+EGK
Sbjct: 26 RHMIRPYWADQTMLTGHRVGDAIDVVNNDQEYNVSVDVSQFEPEELKVNIVDNQLIIEGK 85
Query: 369 HEERQDEHGYISRQFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVPIT 548
H E+ D++G + R F R+Y LP P+ ++S LS++GVLTV + + +++PIT
Sbjct: 86 HNEKTDKYGQVERHFVRKYNLPTGVRPEQIKSELSNNGVLTVKYEKN--QEQQPKSIPIT 143
>U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock protein
protein 17,isoform b protein.
Length = 148
Score = 86.2 bits (204), Expect = 2e-17
Identities = 43/120 (35%), Positives = 68/120 (56%), Gaps = 4/120 (3%)
Frame = +3
Query: 201 RDYYRPW--KQMAMANRDVGSTI--TSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGK 368
R RP+ Q + VG I +N ++ V++DV F PEE+ V D +I+EGK
Sbjct: 25 RHMIRPYWADQTMLTGHRVGDAIDVVNNDQEYNVSVDVSQFEPEELKVNIVDNQLIIEGK 84
Query: 369 HEERQDEHGYISRQFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVPIT 548
H E+ D++G + R F R+Y LP P+ ++S LS++GVLTV + + +++PIT
Sbjct: 85 HNEKTDKYGQVERHFVRKYNLPTGVRPEQIKSELSNNGVLTVKYEKN--QEQQPKSIPIT 142
>L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock
protein protein 12.2 protein.
Length = 110
Score = 80.6 bits (190), Expect = 1e-15
Identities = 34/82 (41%), Positives = 56/82 (68%)
Frame = +3
Query: 261 ITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALPEN 440
+ + K+KF+V LDVQ F+P+EI VK + +++ +HE R D HG ++R+ R Y LP++
Sbjct: 27 VHNTKEKFEVGLDVQFFTPKEIEVKVSGQELLIHCRHETRSDNHGTVAREINRAYKLPDD 86
Query: 441 CNPDTVESRLSSDGVLTVIAPR 506
+ TV+S L++ GVLT+ A +
Sbjct: 87 VDVSTVKSHLATRGVLTITASK 108
>M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 144
Score = 76.2 bits (179), Expect = 2e-14
Identities = 36/100 (36%), Positives = 62/100 (62%)
Frame = +3
Query: 246 DVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRY 425
++G I +++ KF V LDV HF PE + +K + +EG +E + EHGY+ R F++
Sbjct: 43 NIGEQIVNDESKFSVQLDVSHFKPENLKIKLDGRELKIEGI-QETKSEHGYLKRSFSKMI 101
Query: 426 ALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVPI 545
LPE+ + +V+S +S++G L + AP+ T + R++PI
Sbjct: 102 LLPEDADLPSVKSAISNEGKLQIEAPK---KTNSSRSIPI 138
>Z81125-8|CAB03380.1| 109|Caenorhabditis elegans Hypothetical
protein T22A3.2a protein.
Length = 109
Score = 74.9 bits (176), Expect = 5e-14
Identities = 33/80 (41%), Positives = 50/80 (62%)
Frame = +3
Query: 261 ITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALPEN 440
+T+ +KF+V LD F P +I VK +I+ +H+ R E+G ++R+ R Y LPE+
Sbjct: 27 VTNTSEKFEVGLDAGFFGPNDIDVKVNGIEIIIHLRHDNRPTEYGIVNREVHRTYKLPED 86
Query: 441 CNPDTVESRLSSDGVLTVIA 500
+P TV S L+S GVLT+ A
Sbjct: 87 VDPSTVRSHLNSSGVLTITA 106
>K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock protein
16-48a protein.
Length = 144
Score = 74.5 bits (175), Expect = 6e-14
Identities = 35/100 (35%), Positives = 63/100 (63%)
Frame = +3
Query: 246 DVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRY 425
++G I +++ KF V LDV HF PE++ ++ + +EG +E++ EHGY R F++
Sbjct: 43 NIGEQIVNDESKFSVQLDVSHFKPEDLKIELDGRELKIEGI-QEKKSEHGYSKRSFSKMI 101
Query: 426 ALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVPI 545
LPE+ + +V+S +S++G L + AP+ T + R++PI
Sbjct: 102 LLPEDVDLTSVKSAISNEGKLQIEAPK---KTNSSRSIPI 138
>U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock protein
protein 43 protein.
Length = 368
Score = 74.1 bits (174), Expect = 8e-14
Identities = 36/106 (33%), Positives = 61/106 (57%), Gaps = 2/106 (1%)
Frame = +3
Query: 246 DVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRY 425
DV S + ++ +F V++D F PEEI VKT D +++EG+HE+ +D+ + F R+Y
Sbjct: 102 DVNSNVVNDDRRFAVDMDCYQFRPEEIQVKTLDDTLMIEGRHEDIRDKDNFTKMYFVRKY 161
Query: 426 ALPENCNPDTVESRLSSDGVLTVIAPR--TPAATKNERAVPITQTG 557
LP + + ++++S + + G L V A + A ER +PI G
Sbjct: 162 QLPRDVDFNSIQSSIDAKGRLQVEAGKFNNMALQGRERMIPIEGAG 207
>U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.11 protein.
Length = 145
Score = 73.3 bits (172), Expect = 1e-13
Identities = 40/109 (36%), Positives = 61/109 (55%)
Frame = +3
Query: 255 STITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALP 434
S I +N KF +NL+V F PE++ + DG+ + +E + EHGY + F+R LP
Sbjct: 41 SEIVNNDQKFAINLNVSQFKPEDLKINL-DGHTLSIQGEQELKTEHGYSKKSFSRVILLP 99
Query: 435 ENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVPITQTGPVRKEIKE 581
E+ + V S LS DG L++ AP+ A R++PI Q PV ++ E
Sbjct: 100 EDVDVGAVASNLSEDGKLSIEAPKKEAI--QGRSIPI-QQAPVEQKTSE 145
>U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.1 protein.
Length = 145
Score = 73.3 bits (172), Expect = 1e-13
Identities = 40/109 (36%), Positives = 61/109 (55%)
Frame = +3
Query: 255 STITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALP 434
S I +N KF +NL+V F PE++ + DG+ + +E + EHGY + F+R LP
Sbjct: 41 SEIVNNDQKFAINLNVSQFKPEDLKINL-DGHTLSIQGEQELKTEHGYSKKSFSRVILLP 99
Query: 435 ENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVPITQTGPVRKEIKE 581
E+ + V S LS DG L++ AP+ A R++PI Q PV ++ E
Sbjct: 100 EDVDVGAVASNLSEDGKLSIEAPKKEAI--QGRSIPI-QQAPVEQKTSE 145
>K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock protein
16-1a protein.
Length = 145
Score = 73.3 bits (172), Expect = 1e-13
Identities = 40/109 (36%), Positives = 61/109 (55%)
Frame = +3
Query: 255 STITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALP 434
S I +N KF +NL+V F PE++ + DG+ + +E + EHGY + F+R LP
Sbjct: 41 SEIVNNDQKFAINLNVSQFKPEDLKINL-DGHTLSIQGEQELKTEHGYSKKSFSRVILLP 99
Query: 435 ENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVPITQTGPVRKEIKE 581
E+ + V S LS DG L++ AP+ A R++PI Q PV ++ E
Sbjct: 100 EDVDVGAVASNLSEDGKLSIEAPKKEAI--QGRSIPI-QQAPVEQKTSE 145
>AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock
protein protein 16.41 protein.
Length = 143
Score = 73.3 bits (172), Expect = 1e-13
Identities = 39/121 (32%), Positives = 68/121 (56%)
Frame = +3
Query: 183 ITPTMSRDYYRPWKQMAMANRDVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVE 362
+T ++ Y+R + D I +++ KF V LDV HF PE + +K + +E
Sbjct: 21 LTGSVQFPYWRNADHNSFNFSDNIGEIVNDESKFSVQLDVSHFKPENLKIKLDGRELKIE 80
Query: 363 GKHEERQDEHGYISRQFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVP 542
G +E + EHGY+ R F++ LPE+ + +V+S +S++G L + AP+ T + R++P
Sbjct: 81 GI-QETKSEHGYLKRSFSKMILLPEDADLPSVKSAISNEGKLQIEAPK---KTNSSRSIP 136
Query: 543 I 545
I
Sbjct: 137 I 137
>X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C.
elegans mRNA 3'-regionfor heat shock protein hsp 16-41
(exon 2).somal genes.).
Length = 97
Score = 72.5 bits (170), Expect = 3e-13
Identities = 35/95 (36%), Positives = 59/95 (62%)
Frame = +3
Query: 261 ITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALPEN 440
I +++ KF V LDV HF PE + +K + +EG +E + EHGY+ R F++ LPE+
Sbjct: 1 IVNDESKFSVQLDVSHFKPENLKIKLDGRELKIEGI-QETKSEHGYLKRSFSKMILLPED 59
Query: 441 CNPDTVESRLSSDGVLTVIAPRTPAATKNERAVPI 545
+ +V+S +S++G L + AP+ T + R++PI
Sbjct: 60 ADLPSVKSAISNEGKLQIEAPK---KTNSSRSIPI 91
>X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal
fragment of hsp 16-48 protein.
Length = 135
Score = 72.5 bits (170), Expect = 3e-13
Identities = 39/121 (32%), Positives = 69/121 (57%)
Frame = +3
Query: 183 ITPTMSRDYYRPWKQMAMANRDVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVE 362
IT ++ Y+R + D I +++ KF V LDV HF PE++ ++ + +E
Sbjct: 13 ITGSVQFPYWRNADHNSFNFSDNIGEIVNDESKFSVQLDVSHFKPEDLKIELDGRELKIE 72
Query: 363 GKHEERQDEHGYISRQFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVP 542
G +E++ EHGY R F++ LPE+ + +V+S +S++G L + AP+ T + R++P
Sbjct: 73 GI-QEKKSEHGYSKRSFSKMILLPEDVDLTSVKSAISNEGKLQIEAPK---KTNSSRSIP 128
Query: 543 I 545
I
Sbjct: 129 I 129
>U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.49 protein.
Length = 143
Score = 72.5 bits (170), Expect = 3e-13
Identities = 39/121 (32%), Positives = 69/121 (57%)
Frame = +3
Query: 183 ITPTMSRDYYRPWKQMAMANRDVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVE 362
IT ++ Y+R + D I +++ KF V LDV HF PE++ ++ + +E
Sbjct: 21 ITGSVQFPYWRNADHNSFNFSDNIGEIVNDESKFSVQLDVSHFKPEDLKIELDGRELKIE 80
Query: 363 GKHEERQDEHGYISRQFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVP 542
G +E++ EHGY R F++ LPE+ + +V+S +S++G L + AP+ T + R++P
Sbjct: 81 GI-QEKKSEHGYSKRSFSKMILLPEDVDLTSVKSAISNEGKLQIEAPK---KTNSSRSIP 136
Query: 543 I 545
I
Sbjct: 137 I 137
>U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.48 protein.
Length = 143
Score = 72.5 bits (170), Expect = 3e-13
Identities = 39/121 (32%), Positives = 69/121 (57%)
Frame = +3
Query: 183 ITPTMSRDYYRPWKQMAMANRDVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVE 362
IT ++ Y+R + D I +++ KF V LDV HF PE++ ++ + +E
Sbjct: 21 ITGSVQFPYWRNADHNSFNFSDNIGEIVNDESKFSVQLDVSHFKPEDLKIELDGRELKIE 80
Query: 363 GKHEERQDEHGYISRQFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVP 542
G +E++ EHGY R F++ LPE+ + +V+S +S++G L + AP+ T + R++P
Sbjct: 81 GI-QEKKSEHGYSKRSFSKMILLPEDVDLTSVKSAISNEGKLQIEAPK---KTNSSRSIP 136
Query: 543 I 545
I
Sbjct: 137 I 137
>K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock protein
16-48 protein.
Length = 143
Score = 72.5 bits (170), Expect = 3e-13
Identities = 39/121 (32%), Positives = 69/121 (57%)
Frame = +3
Query: 183 ITPTMSRDYYRPWKQMAMANRDVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVE 362
IT ++ Y+R + D I +++ KF V LDV HF PE++ ++ + +E
Sbjct: 21 ITGSVQFPYWRNADHNSFNFSDNIGEIVNDESKFSVQLDVSHFKPEDLKIELDGRELKIE 80
Query: 363 GKHEERQDEHGYISRQFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVP 542
G +E++ EHGY R F++ LPE+ + +V+S +S++G L + AP+ T + R++P
Sbjct: 81 GI-QEKKSEHGYSKRSFSKMILLPEDVDLTSVKSAISNEGKLQIEAPK---KTNSSRSIP 136
Query: 543 I 545
I
Sbjct: 137 I 137
>K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock protein
16-1 protein.
Length = 146
Score = 72.1 bits (169), Expect = 3e-13
Identities = 39/107 (36%), Positives = 60/107 (56%)
Frame = +3
Query: 261 ITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALPEN 440
I +N KF +NL+V F PE++ + DG+ + +E + EHGY + F+R LPE+
Sbjct: 44 IVNNDQKFAINLNVSQFKPEDLKINL-DGHTLSIQGEQELKTEHGYSKKSFSRVILLPED 102
Query: 441 CNPDTVESRLSSDGVLTVIAPRTPAATKNERAVPITQTGPVRKEIKE 581
+ V S LS DG L++ AP+ A R++PI Q PV ++ E
Sbjct: 103 VDVGAVASNLSEDGKLSIEAPKKEAI--QGRSIPI-QQAPVEQKTSE 146
>U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock protein
protein 25,isoform c protein.
Length = 108
Score = 69.7 bits (163), Expect = 2e-12
Identities = 31/79 (39%), Positives = 50/79 (63%)
Frame = +3
Query: 267 SNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALPENCN 446
S+ ++ DV ++ PEE++VKT D ++V KHEE+ + + R++ + + LP N
Sbjct: 23 SDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQRT-VFREYNQEFLLPRGTN 81
Query: 447 PDTVESRLSSDGVLTVIAP 503
P+ + S LS+DGVLTV AP
Sbjct: 82 PEQISSTLSTDGVLTVEAP 100
>U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock protein
protein 25,isoform b protein.
Length = 205
Score = 69.7 bits (163), Expect = 2e-12
Identities = 31/79 (39%), Positives = 50/79 (63%)
Frame = +3
Query: 267 SNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALPENCN 446
S+ ++ DV ++ PEE++VKT D ++V KHEE+ + + R++ + + LP N
Sbjct: 120 SDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQRT-VFREYNQEFLLPRGTN 178
Query: 447 PDTVESRLSSDGVLTVIAP 503
P+ + S LS+DGVLTV AP
Sbjct: 179 PEQISSTLSTDGVLTVEAP 197
>U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock protein
protein 25,isoform a protein.
Length = 219
Score = 69.7 bits (163), Expect = 2e-12
Identities = 31/79 (39%), Positives = 50/79 (63%)
Frame = +3
Query: 267 SNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALPENCN 446
S+ ++ DV ++ PEE++VKT D ++V KHEE+ + + R++ + + LP N
Sbjct: 134 SDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQRT-VFREYNQEFLLPRGTN 192
Query: 447 PDTVESRLSSDGVLTVIAP 503
P+ + S LS+DGVLTV AP
Sbjct: 193 PEQISSTLSTDGVLTVEAP 211
>M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 145
Score = 69.7 bits (163), Expect = 2e-12
Identities = 36/99 (36%), Positives = 56/99 (56%)
Frame = +3
Query: 255 STITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALP 434
S I +N KF +NL+V F PE++ + + ++G+ E + D HGY + F+R LP
Sbjct: 41 SEIVNNDQKFAINLNVSQFKPEDLKINLDGRTLSIQGEQELKTD-HGYSKKSFSRVILLP 99
Query: 435 ENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVPITQ 551
E+ + V S LS DG L++ AP+ A R++PI Q
Sbjct: 100 EDVDVGAVASNLSEDGKLSIEAPKKEAV--QGRSIPIQQ 136
>AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock
protein protein 16.2 protein.
Length = 145
Score = 69.7 bits (163), Expect = 2e-12
Identities = 36/99 (36%), Positives = 56/99 (56%)
Frame = +3
Query: 255 STITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALP 434
S I +N KF +NL+V F PE++ + + ++G+ E + D HGY + F+R LP
Sbjct: 41 SEIVNNDQKFAINLNVSQFKPEDLKINLDGRTLSIQGEQELKTD-HGYSKKSFSRVILLP 99
Query: 435 ENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVPITQ 551
E+ + V S LS DG L++ AP+ A R++PI Q
Sbjct: 100 EDVDVGAVASNLSEDGKLSIEAPKKEAV--QGRSIPIQQ 136
>Z81125-9|CAL64006.1| 112|Caenorhabditis elegans Hypothetical
protein T22A3.2b protein.
Length = 112
Score = 68.9 bits (161), Expect = 3e-12
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Frame = +3
Query: 261 ITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHE---ERQDEHGYISRQFTRRYAL 431
+T+ +KF+V LD F P +I VK +I+ +H+ R E+G ++R+ R Y L
Sbjct: 27 VTNTSEKFEVGLDAGFFGPNDIDVKVNGIEIIIHLRHDLLQNRPTEYGIVNREVHRTYKL 86
Query: 432 PENCNPDTVESRLSSDGVLTVIA 500
PE+ +P TV S L+S GVLT+ A
Sbjct: 87 PEDVDPSTVRSHLNSSGVLTITA 109
>EF035034-1|ABK34454.1| 112|Caenorhabditis elegans heat-shock
protein 12.1 protein.
Length = 112
Score = 68.9 bits (161), Expect = 3e-12
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Frame = +3
Query: 261 ITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHE---ERQDEHGYISRQFTRRYAL 431
+T+ +KF+V LD F P +I VK +I+ +H+ R E+G ++R+ R Y L
Sbjct: 27 VTNTSEKFEVGLDAGFFGPNDIDVKVNGIEIIIHLRHDLLQNRPTEYGIVNREVHRTYKL 86
Query: 432 PENCNPDTVESRLSSDGVLTVIA 500
PE+ +P TV S L+S GVLT+ A
Sbjct: 87 PEDVDPSTVRSHLNSSGVLTITA 109
>Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.4 protein.
Length = 147
Score = 68.1 bits (159), Expect = 6e-12
Identities = 35/99 (35%), Positives = 59/99 (59%)
Frame = +3
Query: 255 STITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALP 434
S I ++ DKF VNL+V +F PEE+ V + ++G+H+ ++EHG + F+R LP
Sbjct: 43 SEIMNSNDKFAVNLNVSNFKPEELKVNLEGRQLSIQGEHDV-ENEHGASRKSFSRMILLP 101
Query: 435 ENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVPITQ 551
E+ + +V + LS+DG L + AP+ R+VP+ +
Sbjct: 102 EDVDITSVATNLSNDGKLCIEAPKLEGVC--GRSVPVKE 138
>AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical
protein Y55F3BR.6 protein.
Length = 180
Score = 68.1 bits (159), Expect = 6e-12
Identities = 36/97 (37%), Positives = 55/97 (56%)
Frame = +3
Query: 255 STITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALP 434
++I F LDV + + + V D +IVEG H E++D +G I F RR+ LP
Sbjct: 72 TSIRVTNTSFHAILDVSKYDADSLKVTVVDNNIIVEGSHGEKEDTYGTIESTFKRRFPLP 131
Query: 435 ENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVPI 545
+ P++V+S+L++DG LT+ A + P K E A PI
Sbjct: 132 KAVAPESVQSQLTADGHLTIDA-KAP-EPKQEGARPI 166
>Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical
protein F43D9.4 protein.
Length = 159
Score = 67.7 bits (158), Expect = 7e-12
Identities = 34/95 (35%), Positives = 56/95 (58%)
Frame = +3
Query: 261 ITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALPEN 440
+ + KF V LDV F PEE+ V + +EG HE + EHG+ R FTR++ LP++
Sbjct: 46 VENTAQKFCVKLDVAAFKPEELKVNLEGHVLTIEGHHEVKT-EHGFSKRSFTRQFTLPKD 104
Query: 441 CNPDTVESRLSSDGVLTVIAPRTPAATKNERAVPI 545
+ + + ++ +G +T+ AP+T + T RA+PI
Sbjct: 105 VDLAHIHTVINKEGQMTIDAPKTGSNT-TVRALPI 138
>Z47357-12|CAA87429.2| 205|Caenorhabditis elegans Hypothetical
protein ZK1128.7 protein.
Length = 205
Score = 62.1 bits (144), Expect = 4e-10
Identities = 28/82 (34%), Positives = 47/82 (57%)
Frame = +3
Query: 261 ITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALPEN 440
IT+ F + +DV HF PEEI V D + + G+ E + + R F+R+Y++P++
Sbjct: 97 ITNTSHGFTIEIDVFHFMPEEIKVVLTDDTLSISGERFESTGDGHTLRRSFSRKYSIPDD 156
Query: 441 CNPDTVESRLSSDGVLTVIAPR 506
+ DT+ S L++ GVL + R
Sbjct: 157 VHLDTIRSHLTNSGVLIINGSR 178
>Z30974-3|CAA83227.2| 205|Caenorhabditis elegans Hypothetical
protein ZK1128.7 protein.
Length = 205
Score = 62.1 bits (144), Expect = 4e-10
Identities = 28/82 (34%), Positives = 47/82 (57%)
Frame = +3
Query: 261 ITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALPEN 440
IT+ F + +DV HF PEEI V D + + G+ E + + R F+R+Y++P++
Sbjct: 97 ITNTSHGFTIEIDVFHFMPEEIKVVLTDDTLSISGERFESTGDGHTLRRSFSRKYSIPDD 156
Query: 441 CNPDTVESRLSSDGVLTVIAPR 506
+ DT+ S L++ GVL + R
Sbjct: 157 VHLDTIRSHLTNSGVLIINGSR 178
>Z68342-8|CAA92771.1| 110|Caenorhabditis elegans Hypothetical
protein F38E11.2 protein.
Length = 110
Score = 61.3 bits (142), Expect = 6e-10
Identities = 28/80 (35%), Positives = 46/80 (57%)
Frame = +3
Query: 261 ITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALPEN 440
+ + D F+V L+ +F P+EI VK + + +H ++D G +SR TR Y LP+N
Sbjct: 27 VLDDDDHFEVGLEAHNFLPKEIEVKNIGELLEIHMEHNVKKDSFGDVSRNITRCYKLPKN 86
Query: 441 CNPDTVESRLSSDGVLTVIA 500
+ T++S L S G+L + A
Sbjct: 87 VDMKTIKSNLDSHGILHIEA 106
>U92044-1|AAC47521.1| 110|Caenorhabditis elegans heat shock protein
12.6 protein.
Length = 110
Score = 61.3 bits (142), Expect = 6e-10
Identities = 28/80 (35%), Positives = 46/80 (57%)
Frame = +3
Query: 261 ITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALPEN 440
+ + D F+V L+ +F P+EI VK + + +H ++D G +SR TR Y LP+N
Sbjct: 27 VLDDDDHFEVGLEAHNFLPKEIEVKNIGELLEIHMEHNVKKDSFGDVSRNITRCYKLPKN 86
Query: 441 CNPDTVESRLSSDGVLTVIA 500
+ T++S L S G+L + A
Sbjct: 87 VDMKTIKSNLDSHGILHIEA 106
>Z68342-1|CAA92770.1| 109|Caenorhabditis elegans Hypothetical
protein F38E11.1 protein.
Length = 109
Score = 60.9 bits (141), Expect = 8e-10
Identities = 26/74 (35%), Positives = 43/74 (58%)
Frame = +3
Query: 273 KDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALPENCNPD 452
+D F+V L+ +F P EI VK ++ + H + D+ G I+R TR Y LP+ +P
Sbjct: 30 EDHFEVGLEAHNFLPNEIDVKNIGEFLEIHMAHTTKDDKFGSITRSITRCYRLPKGTDPA 89
Query: 453 TVESRLSSDGVLTV 494
T++S+L G+L +
Sbjct: 90 TIKSKLDGSGILHI 103
>Z77657-2|CAB01146.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.3 protein.
Length = 147
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/94 (26%), Positives = 49/94 (52%)
Frame = +3
Query: 246 DVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRY 425
D + I +KF VNL+V PEE+ + + ++ +H+E ++++ ++ +++
Sbjct: 39 DCRNEIVDTHEKFSVNLNVPDVKPEELKINLEGRKLSIKAEHQEIENDNISTTQTYSKSI 98
Query: 426 ALPENCNPDTVESRLSSDGVLTVIAPRTPAATKN 527
LPE+ + + S LS DG L + P+ A N
Sbjct: 99 VLPEDVDVTHLSSNLSEDGKLLIEVPKVEAKKTN 132
>M31339-1|AAA28072.1| 22|Caenorhabditis elegans hsp16-48 protein.
Length = 22
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 261 ITSNKDKFQVNLDVQHFSPEE 323
I +++ KF V LDV HF PE+
Sbjct: 2 IVNDESKFSVQLDVSHFKPED 22
>AC084197-36|AAG23464.2| 381|Caenorhabditis elegans Hypothetical
protein Y73B6BL.24 protein.
Length = 381
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = -1
Query: 620 SLFCFVALNFRSGLLNLLPDRAGLSDGNSSLVLRGSRSPGSDHGQHAVRGQPR 462
+L F AL + +LLP ++ D NS LVL G+R G+ H + ++ PR
Sbjct: 2 NLLLFSALILATSAAHLLPKKSVAIDKNSVLVLFGTRH-GNRHPEVFLQENPR 53
>AY081955-1|AAL92523.1| 788|Caenorhabditis elegans MAT-1 protein.
Length = 788
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = +3
Query: 444 NPDTVESRLSSDGVLTVIAPRTPAATKNERAVPITQTGPVRKEIKEPTAEVESNETKQ*L 623
N DT S S+ + IA T ++ ++R T PVR I+ A +N+T + L
Sbjct: 326 NSDTENSNASNTRTRSGIASVTRGSSSSQR------TNPVRTSIRIADAAAAANKTAKTL 379
Query: 624 SERCESKK 647
S+R ++K
Sbjct: 380 SQRRRNEK 387
>AC006708-13|AAF60415.1| 788|Caenorhabditis elegans
Metaphase-to-anaphase transitiondefect protein 1,
isoform a protein.
Length = 788
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = +3
Query: 444 NPDTVESRLSSDGVLTVIAPRTPAATKNERAVPITQTGPVRKEIKEPTAEVESNETKQ*L 623
N DT S S+ + IA T ++ ++R T PVR I+ A +N+T + L
Sbjct: 326 NSDTENSNASNTRTRSGIASVTRGSSSSQR------TNPVRTSIRIADAAAAANKTAKTL 379
Query: 624 SERCESKK 647
S+R ++K
Sbjct: 380 SQRRRNEK 387
>Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical protein
C34E11.3 protein.
Length = 1577
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = -1
Query: 176 RQEIVRSKRQSEVLIAKAVRLVSQDEWQQRHFYFTLGCEISSDITVRSNSQHS-FRELA 3
R+E+ R + S L+AKA + + +R F+ G S + N +HS F E A
Sbjct: 1425 REELARGGQPSVKLMAKAFEAIDEPRTDKRGFF---GIRKSRSVETTQNGKHSKFEEAA 1480
>Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = -1
Query: 176 RQEIVRSKRQSEVLIAKAVRLVSQDEWQQRHFYFTLGCEISSDITVRSNSQHS-FRELA 3
R+E+ R + S L+AKA + + +R F+ G S + N +HS F E A
Sbjct: 1425 REELARGGQPSVKLMAKAFEAIDEPRTDKRGFF---GIRKSRSVETTQNGKHSKFEEAA 1480
>Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical protein
C34E11.3 protein.
Length = 1577
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = -1
Query: 176 RQEIVRSKRQSEVLIAKAVRLVSQDEWQQRHFYFTLGCEISSDITVRSNSQHS-FRELA 3
R+E+ R + S L+AKA + + +R F+ G S + N +HS F E A
Sbjct: 1425 REELARGGQPSVKLMAKAFEAIDEPRTDKRGFF---GIRKSRSVETTQNGKHSKFEEAA 1480
>Z81524-4|CAB04250.1| 528|Caenorhabditis elegans Hypothetical
protein F32H5.4 protein.
Length = 528
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 258 TITSNKDKFQVNLDVQHFSPEEISVKTA 341
TITS D + +N+D HF E VKT+
Sbjct: 95 TITSKYDFYSINVDYGHFCGEGAWVKTS 122
>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
protein C47D12.1c protein.
Length = 4053
Score = 28.3 bits (60), Expect = 5.5
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +1
Query: 49 SLDISHPKVK*KCLCCHSSWDTNRTAFAIRTSDWRLLRTIS*RPS--SRQRCPEITTGRG 222
++DI+H + K + + W + AF ++ + W +LRTI+ RP+ + +R I
Sbjct: 2575 TVDIAH---RMKYIMQNQDWSKFKHAFWLKFALWGMLRTIAKRPTDPNNKRKKVILLNCA 2631
Query: 223 SRWR 234
+ WR
Sbjct: 2632 TPWR 2635
>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
C47D12.1b protein.
Length = 4061
Score = 28.3 bits (60), Expect = 5.5
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +1
Query: 49 SLDISHPKVK*KCLCCHSSWDTNRTAFAIRTSDWRLLRTIS*RPS--SRQRCPEITTGRG 222
++DI+H + K + + W + AF ++ + W +LRTI+ RP+ + +R I
Sbjct: 2586 TVDIAH---RMKYIMQNQDWSKFKHAFWLKFALWGMLRTIAKRPTDPNNKRKKVILLNCA 2642
Query: 223 SRWR 234
+ WR
Sbjct: 2643 TPWR 2646
>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
C47D12.1a protein.
Length = 4064
Score = 28.3 bits (60), Expect = 5.5
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +1
Query: 49 SLDISHPKVK*KCLCCHSSWDTNRTAFAIRTSDWRLLRTIS*RPS--SRQRCPEITTGRG 222
++DI+H + K + + W + AF ++ + W +LRTI+ RP+ + +R I
Sbjct: 2586 TVDIAH---RMKYIMQNQDWSKFKHAFWLKFALWGMLRTIAKRPTDPNNKRKKVILLNCA 2642
Query: 223 SRWR 234
+ WR
Sbjct: 2643 TPWR 2646
>Z68752-7|CAA92982.2| 693|Caenorhabditis elegans Hypothetical
protein T12G3.1 protein.
Length = 693
Score = 28.3 bits (60), Expect = 5.5
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = +3
Query: 444 NPDTVESRLSSDGVLTVIAPRTPAATKNERAVPITQTGP-VRKEIKEPTAEVESN 605
+P T + + L TPA T VP+T T P V I P VESN
Sbjct: 516 DPPTTPNTEPATTELASTTSATPAVTAPASIVPVTPTAPIVETLIVPPLPPVESN 570
>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
Length = 4064
Score = 28.3 bits (60), Expect = 5.5
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +1
Query: 49 SLDISHPKVK*KCLCCHSSWDTNRTAFAIRTSDWRLLRTIS*RPS--SRQRCPEITTGRG 222
++DI+H + K + + W + AF ++ + W +LRTI+ RP+ + +R I
Sbjct: 2586 TVDIAH---RMKYIMQNQDWSKFKHAFWLKFALWGMLRTIAKRPTDPNNKRKKVILLNCA 2642
Query: 223 SRWR 234
+ WR
Sbjct: 2643 TPWR 2646
>U61946-10|AAC24388.1| 1827|Caenorhabditis elegans Hypothetical
protein F47C12.1 protein.
Length = 1827
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +3
Query: 435 ENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVPITQTGPV 563
ENC + +++ +G L + PAA+ N + TQ P+
Sbjct: 1119 ENCPESEIFAKVDENGQLKAVEFEEPAASDNSGKIAYTQIEPL 1161
>AL117195-25|CAB55036.1| 1048|Caenorhabditis elegans Hypothetical
protein Y57A10A.31 protein.
Length = 1048
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 130 AIRTSDWRLLRTIS*RPSSRQRCPEITTGRGSRW 231
AI+ ++L +S + S + CPE+T G G +W
Sbjct: 637 AIQLFATQILEIMSPKEFSTENCPEMTFGIGEQW 670
>Z81522-5|CAD98731.1| 663|Caenorhabditis elegans Hypothetical
protein F32B4.4b protein.
Length = 663
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +1
Query: 553 PARSGRRLRSPLR-KLRATKQNNDSRNA 633
PAR+ R RSPLR LRA + + SR++
Sbjct: 184 PARTSRMARSPLRAPLRAARGSESSRSS 211
>Z81522-4|CAB04233.1| 771|Caenorhabditis elegans Hypothetical
protein F32B4.4a protein.
Length = 771
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +1
Query: 553 PARSGRRLRSPLR-KLRATKQNNDSRNA 633
PAR+ R RSPLR LRA + + SR++
Sbjct: 292 PARTSRMARSPLRAPLRAARGSESSRSS 319
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,942,651
Number of Sequences: 27780
Number of extensions: 300107
Number of successful extensions: 1074
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1053
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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