Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte17c20
(438 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D84296-1|BAA12303.1| 1715|Homo sapiens TPRDIII protein. 29 9.3
D84295-1|BAA12302.1| 1792|Homo sapiens possible protein TPRDII p... 29 9.3
D84294-1|BAA12301.1| 2025|Homo sapiens TPRDI protein. 29 9.3
D83327-1|BAA23666.1| 1941|Homo sapiens DCRR1 protein. 29 9.3
D83077-1|BAA11769.1| 2025|Homo sapiens TPRD protein. 29 9.3
BC150274-1|AAI50275.1| 1981|Homo sapiens CASP8AP2 protein protein. 29 9.3
BC132830-1|AAI32831.1| 1982|Homo sapiens CASP8 associated protei... 29 9.3
BC132828-1|AAI32829.1| 1982|Homo sapiens CASP8 associated protei... 29 9.3
AL353692-6|CAI16239.1| 1964|Homo sapiens CASP8 associated protei... 29 9.3
AF165161-1|AAD45157.1| 1269|Homo sapiens FLASH protein. 29 9.3
AF164678-1|AAD45537.2| 1982|Homo sapiens FLASH homolog RIP25 pro... 29 9.3
AF154415-1|AAF03367.1| 1982|Homo sapiens FLASH protein. 29 9.3
AB037736-1|BAA92553.2| 1981|Homo sapiens KIAA1315 protein protein. 29 9.3
>D84296-1|BAA12303.1| 1715|Homo sapiens TPRDIII protein.
Length = 1715
Score = 28.7 bits (61), Expect = 9.3
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +2
Query: 44 FVIQHLINI*NVIASHLNLHKMSNMKEQEQNTAKLV--MNAF 163
+VI+HLI N + + + LH +S +KE E A + +N+F
Sbjct: 562 YVIRHLIQENNRVKTRIFLHVLSELKEVEPKLAAWIQKLNSF 603
>D84295-1|BAA12302.1| 1792|Homo sapiens possible protein TPRDII
protein.
Length = 1792
Score = 28.7 bits (61), Expect = 9.3
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +2
Query: 44 FVIQHLINI*NVIASHLNLHKMSNMKEQEQNTAKLV--MNAF 163
+VI+HLI N + + + LH +S +KE E A + +N+F
Sbjct: 639 YVIRHLIQENNRVKTRIFLHVLSELKEVEPKLAAWIQKLNSF 680
>D84294-1|BAA12301.1| 2025|Homo sapiens TPRDI protein.
Length = 2025
Score = 28.7 bits (61), Expect = 9.3
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +2
Query: 44 FVIQHLINI*NVIASHLNLHKMSNMKEQEQNTAKLV--MNAF 163
+VI+HLI N + + + LH +S +KE E A + +N+F
Sbjct: 872 YVIRHLIQENNRVKTRIFLHVLSELKEVEPKLAAWIQKLNSF 913
>D83327-1|BAA23666.1| 1941|Homo sapiens DCRR1 protein.
Length = 1941
Score = 28.7 bits (61), Expect = 9.3
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +2
Query: 44 FVIQHLINI*NVIASHLNLHKMSNMKEQEQNTAKLV--MNAF 163
+VI+HLI N + + + LH +S +KE E A + +N+F
Sbjct: 788 YVIRHLIQENNRVKTRIFLHVLSELKEVEPKLAAWIQKLNSF 829
>D83077-1|BAA11769.1| 2025|Homo sapiens TPRD protein.
Length = 2025
Score = 28.7 bits (61), Expect = 9.3
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +2
Query: 44 FVIQHLINI*NVIASHLNLHKMSNMKEQEQNTAKLV--MNAF 163
+VI+HLI N + + + LH +S +KE E A + +N+F
Sbjct: 872 YVIRHLIQENNRVKTRIFLHVLSELKEVEPKLAAWIQKLNSF 913
>BC150274-1|AAI50275.1| 1981|Homo sapiens CASP8AP2 protein protein.
Length = 1981
Score = 28.7 bits (61), Expect = 9.3
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 17 SLIGFHVFFFVIQHLINI*NVIASHLNLHKMS-NMKEQEQNTAKLVMNAFYSVDGKNGVT 193
SLI FH +I+ I + HLNLHK+S ++ ++N ++ + V KNG+
Sbjct: 1061 SLIQFHR---IIESAILSFTSLIKHLNLHKISKSVTTLQKNLCDIIESKLKQVK-KNGIV 1116
Query: 194 AADITKYLQEKFGDVWK 244
+ L + +WK
Sbjct: 1117 DRLFEQQLPDMKKKLWK 1133
>BC132830-1|AAI32831.1| 1982|Homo sapiens CASP8 associated protein 2
protein.
Length = 1982
Score = 28.7 bits (61), Expect = 9.3
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 17 SLIGFHVFFFVIQHLINI*NVIASHLNLHKMS-NMKEQEQNTAKLVMNAFYSVDGKNGVT 193
SLI FH +I+ I + HLNLHK+S ++ ++N ++ + V KNG+
Sbjct: 1061 SLIQFHR---IIESAILSFTSLIKHLNLHKISKSVTTLQKNLCDIIESKLKQVK-KNGIV 1116
Query: 194 AADITKYLQEKFGDVWK 244
+ L + +WK
Sbjct: 1117 DRLFEQQLPDMKKKLWK 1133
>BC132828-1|AAI32829.1| 1982|Homo sapiens CASP8 associated protein 2
protein.
Length = 1982
Score = 28.7 bits (61), Expect = 9.3
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 17 SLIGFHVFFFVIQHLINI*NVIASHLNLHKMS-NMKEQEQNTAKLVMNAFYSVDGKNGVT 193
SLI FH +I+ I + HLNLHK+S ++ ++N ++ + V KNG+
Sbjct: 1061 SLIQFHR---IIESAILSFTSLIKHLNLHKISKSVTTLQKNLCDIIESKLKQVK-KNGIV 1116
Query: 194 AADITKYLQEKFGDVWK 244
+ L + +WK
Sbjct: 1117 DRLFEQQLPDMKKKLWK 1133
>AL353692-6|CAI16239.1| 1964|Homo sapiens CASP8 associated protein 2
protein.
Length = 1964
Score = 28.7 bits (61), Expect = 9.3
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 17 SLIGFHVFFFVIQHLINI*NVIASHLNLHKMS-NMKEQEQNTAKLVMNAFYSVDGKNGVT 193
SLI FH +I+ I + HLNLHK+S ++ ++N ++ + V KNG+
Sbjct: 1061 SLIQFHR---IIESAILSFTSLIKHLNLHKISKSVTTLQKNLCDIIESKLKQVK-KNGIV 1116
Query: 194 AADITKYLQEKFGDVWK 244
+ L + +WK
Sbjct: 1117 DRLFEQQLPDMKKKLWK 1133
>AF165161-1|AAD45157.1| 1269|Homo sapiens FLASH protein.
Length = 1269
Score = 28.7 bits (61), Expect = 9.3
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 17 SLIGFHVFFFVIQHLINI*NVIASHLNLHKMS-NMKEQEQNTAKLVMNAFYSVDGKNGVT 193
SLI FH +I+ I + HLNLHK+S ++ ++N ++ + V KNG+
Sbjct: 348 SLIQFHR---IIESAILSFTSLIKHLNLHKISKSVTTLQKNLCDIIESKLKQVK-KNGIV 403
Query: 194 AADITKYLQEKFGDVWK 244
+ L + +WK
Sbjct: 404 DRLFEQQLPDMKKKLWK 420
>AF164678-1|AAD45537.2| 1982|Homo sapiens FLASH homolog RIP25 protein.
Length = 1982
Score = 28.7 bits (61), Expect = 9.3
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 17 SLIGFHVFFFVIQHLINI*NVIASHLNLHKMS-NMKEQEQNTAKLVMNAFYSVDGKNGVT 193
SLI FH +I+ I + HLNLHK+S ++ ++N ++ + V KNG+
Sbjct: 1061 SLIQFHR---IIESAILSFTSLIKHLNLHKISKSVTTLQKNLCDIIESKLKQVK-KNGIV 1116
Query: 194 AADITKYLQEKFGDVWK 244
+ L + +WK
Sbjct: 1117 DRLFEQQLPDMKKKLWK 1133
>AF154415-1|AAF03367.1| 1982|Homo sapiens FLASH protein.
Length = 1982
Score = 28.7 bits (61), Expect = 9.3
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 17 SLIGFHVFFFVIQHLINI*NVIASHLNLHKMS-NMKEQEQNTAKLVMNAFYSVDGKNGVT 193
SLI FH +I+ I + HLNLHK+S ++ ++N ++ + V KNG+
Sbjct: 1061 SLIQFHR---IIESAILSFTSLIKHLNLHKISKSVTTLQKNLCDIIESKLKQVK-KNGIV 1116
Query: 194 AADITKYLQEKFGDVWK 244
+ L + +WK
Sbjct: 1117 DRLFEQQLPDMKKKLWK 1133
>AB037736-1|BAA92553.2| 1981|Homo sapiens KIAA1315 protein protein.
Length = 1981
Score = 28.7 bits (61), Expect = 9.3
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 17 SLIGFHVFFFVIQHLINI*NVIASHLNLHKMS-NMKEQEQNTAKLVMNAFYSVDGKNGVT 193
SLI FH +I+ I + HLNLHK+S ++ ++N ++ + V KNG+
Sbjct: 1061 SLIQFHR---IIESAILSFTSLIKHLNLHKISKSVTTLQKNLCDIIESKLKQVK-KNGIV 1116
Query: 194 AADITKYLQEKFGDVWK 244
+ L + +WK
Sbjct: 1117 DRLFEQQLPDMKKKLWK 1133
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,256,660
Number of Sequences: 237096
Number of extensions: 1155747
Number of successful extensions: 2855
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2855
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3545165828
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -