Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17c16
         (332 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX537949-1|CAD97917.1|  633|Homo sapiens hypothetical protein pr...    33   0.21 
BC131713-1|AAI31714.1|  633|Homo sapiens guanylate binding prote...    33   0.21 
AL691464-1|CAI22141.1|  633|Homo sapiens guanylate binding prote...    33   0.21 
AK131356-1|BAD18509.1|  633|Homo sapiens protein ( Homo sapiens ...    33   0.21 
BC012352-1|AAH12352.1|  366|Homo sapiens WDR31 protein protein.        32   0.49 

>BX537949-1|CAD97917.1|  633|Homo sapiens hypothetical protein
           protein.
          Length = 633

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = +1

Query: 142 VEVNREQLLTKHSVLKYGISKINEHEIYILCKTVYRTAKHYVVSVVANFFHNF 300
           VE N EQLL     ++  + KI++  + +    +YRT K Y+++ +A   H F
Sbjct: 14  VENNNEQLLVNQQAIQI-LEKISQPVVVVAIVGLYRTGKSYLMNHLAGQNHGF 65


>BC131713-1|AAI31714.1|  633|Homo sapiens guanylate binding protein
           family, member 6 protein.
          Length = 633

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = +1

Query: 142 VEVNREQLLTKHSVLKYGISKINEHEIYILCKTVYRTAKHYVVSVVANFFHNF 300
           VE N EQLL     ++  + KI++  + +    +YRT K Y+++ +A   H F
Sbjct: 14  VENNNEQLLVNQQAIQI-LEKISQPVVVVAIVGLYRTGKSYLMNHLAGQNHGF 65


>AL691464-1|CAI22141.1|  633|Homo sapiens guanylate binding protein
           family, member 6 protein.
          Length = 633

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = +1

Query: 142 VEVNREQLLTKHSVLKYGISKINEHEIYILCKTVYRTAKHYVVSVVANFFHNF 300
           VE N EQLL     ++  + KI++  + +    +YRT K Y+++ +A   H F
Sbjct: 14  VENNNEQLLVNQQAIQI-LEKISQPVVVVAIVGLYRTGKSYLMNHLAGQNHGF 65


>AK131356-1|BAD18509.1|  633|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16386 fis, clone TRACH2000862, moderately
           similar to Mus musculus putative purine nucleotide
           binding protein ).
          Length = 633

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = +1

Query: 142 VEVNREQLLTKHSVLKYGISKINEHEIYILCKTVYRTAKHYVVSVVANFFHNF 300
           VE N EQLL     ++  + KI++  + +    +YRT K Y+++ +A   H F
Sbjct: 14  VENNNEQLLVNQQAIQI-LEKISQPVVVVAIVGLYRTGKSYLMNHLAGQNHGF 65


>BC012352-1|AAH12352.1|  366|Homo sapiens WDR31 protein protein.
          Length = 366

 Score = 31.9 bits (69), Expect = 0.49
 Identities = 19/51 (37%), Positives = 24/51 (47%)
 Frame = +1

Query: 130 YSFTVEVNREQLLTKHSVLKYGISKINEHEIYILCKTVYRTAKHYVVSVVA 282
           + F V + ++Q   KHS  KYG  +I E  I       Y  A    VSVVA
Sbjct: 18  FRFCVVMGKQQSKLKHSTYKYGPDEIIEERIQTKAFQEYSPAHMDTVSVVA 68


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,731,919
Number of Sequences: 237096
Number of extensions: 753027
Number of successful extensions: 1256
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1256
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1736741460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)