Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17c16
         (332 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113337-1|AAM29342.1| 1190|Drosophila melanogaster AT31843p pro...    27   7.8  
AE014297-610|AAF54020.1|  693|Drosophila melanogaster CG10101-PA...    27   7.8  
AE014296-3639|AAF51795.2| 1536|Drosophila melanogaster CG14562-P...    27   7.8  

>AY113337-1|AAM29342.1| 1190|Drosophila melanogaster AT31843p
           protein.
          Length = 1190

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 6/56 (10%)
 Frame = +1

Query: 154 REQLLTK------HSVLKYGISKINEHEIYILCKTVYRTAKHYVVSVVANFFHNFM 303
           REQLL K        +  + I + ++ E+Y+     YR  + ++V +  N+  NFM
Sbjct: 405 REQLLRKMFMANCRKLADFSI-RSSKKEVYLQATGFYRMCQFHLVDIFNNYVQNFM 459


>AE014297-610|AAF54020.1|  693|Drosophila melanogaster CG10101-PA
           protein.
          Length = 693

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -3

Query: 267 YIMFCGAVHSFTQNVNFMFIYLRYSIFKNRMF 172
           Y+ +   +H  TQN++F+F + R S  KN  F
Sbjct: 369 YVQYSAVLH--TQNIHFLFRHPRRSHIKNIFF 398


>AE014296-3639|AAF51795.2| 1536|Drosophila melanogaster CG14562-PA
           protein.
          Length = 1536

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 6/56 (10%)
 Frame = +1

Query: 154 REQLLTK------HSVLKYGISKINEHEIYILCKTVYRTAKHYVVSVVANFFHNFM 303
           REQLL K        +  + I + ++ E+Y+     YR  + ++V +  N+  NFM
Sbjct: 751 REQLLRKMFMANCRKLADFSI-RSSKKEVYLQATGFYRMCQFHLVDIFNNYVQNFM 805


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,764,890
Number of Sequences: 53049
Number of extensions: 240724
Number of successful extensions: 436
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 436
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 735339255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)