Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17c11
         (617 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF043439-1|AAC05664.1|  239|Anopheles gambiae putative pupal-spe...    27   0.64 
AF043433-2|AAC05657.1|  239|Anopheles gambiae putative pupal-spe...    27   0.64 
AF043441-1|AAC05666.1|  231|Anopheles gambiae putative pupal-spe...    26   1.1  
AF043437-1|AAC05662.1|  239|Anopheles gambiae putative pupal-spe...    26   1.1  

>AF043439-1|AAC05664.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 239

 Score = 26.6 bits (56), Expect = 0.64
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +3

Query: 522 HHQ*TGSSATSHKSLQDRALPTV*RSGGL 608
           HH   GS ATSH ++Q  A PT+   G +
Sbjct: 24  HH---GSIATSHSTIQHHAAPTIQHVGSV 49


>AF043433-2|AAC05657.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 239

 Score = 26.6 bits (56), Expect = 0.64
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +3

Query: 522 HHQ*TGSSATSHKSLQDRALPTV*RSGGL 608
           HH   GS ATSH ++Q  A PT+   G +
Sbjct: 24  HH---GSIATSHSTIQHHAAPTIQHVGSV 49


>AF043441-1|AAC05666.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 231

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +3

Query: 537 GSSATSHKSLQDRALPTV*RSGGL 608
           GS ATSH S+Q  A P +   G +
Sbjct: 26  GSIATSHSSIQHHAAPAIHHVGSI 49


>AF043437-1|AAC05662.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 239

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +3

Query: 522 HHQ*TGSSATSHKSLQDRALPTV*RSGGL 608
           HH   GS ATSH S+Q  A P +   G +
Sbjct: 24  HH---GSIATSHSSIQHHAAPAIHHVGSV 49


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 609,829
Number of Sequences: 2352
Number of extensions: 11327
Number of successful extensions: 21
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)