Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17c10
         (668 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            26   0.93 
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    25   2.2  
AF457558-1|AAL68788.1|   56|Anopheles gambiae hypothetical prote...    25   2.2  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   5.0  
CR954257-5|CAJ14156.1|  227|Anopheles gambiae predicted protein ...    23   6.6  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    23   8.7  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 26.2 bits (55), Expect = 0.93
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
 Frame = +3

Query: 582  RKRFP--GAVKEKYNNQTILFRYTAHKEHNK 668
            RKR P  G  +  Y+ Q IL R++ HKEHN+
Sbjct: 1928 RKRTPDGGIWQYLYDKQGIL-RFSLHKEHNE 1957


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
            protein.
          Length = 1253

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = +3

Query: 462  ELSDEQIKKIENWTWDLDLEKEKFLTLEGQDEM--IILAERTRKRFPGAVKEK 614
            E  ++QI  + +W +D+DL+     T+   +E   I L E+  K    + K+K
Sbjct: 858  EEPEKQINYLPDWLYDVDLKNGDTETISASEEQFWIELIEKYLKPLDLSEKQK 910


>AF457558-1|AAL68788.1|   56|Anopheles gambiae hypothetical protein
           11 protein.
          Length = 56

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 11/19 (57%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
 Frame = +1

Query: 196 VCSF*YHLHC-TAHLNLAI 249
           +C F YH HC TA+L LA+
Sbjct: 16  ICLFFYHTHCTTAYLWLAM 34


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 111  PAYLITICYHNESQILSVL 55
            P   I  CYH+E ++++VL
Sbjct: 2358 PLKAIDFCYHDEDEMVTVL 2376


>CR954257-5|CAJ14156.1|  227|Anopheles gambiae predicted protein
           protein.
          Length = 227

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = +3

Query: 240 SSNIQNHLGSRTPYRLKGNKNDSQIKYPNCKDSKIWMVIRHGTRYPNAKD 389
           S N++N   +RTP  + G  + ++I YP   D+      R G  Y   +D
Sbjct: 47  SPNLEN-ARNRTPVYIPGKCSTNEILYPGDHDNDWVCDCRPGYVYSPPQD 95


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
            anion exchanger protein.
          Length = 1102

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -3

Query: 564  LSFHLVPLMLGIFLFPNPSPMSNFRFF 484
            LS   +P++ G+FL+   S +   +FF
Sbjct: 930  LSHIPMPVLYGVFLYMGVSALKGLQFF 956


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 638,492
Number of Sequences: 2352
Number of extensions: 11773
Number of successful extensions: 26
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)