Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte17c08
(533 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL590343-3|CAC35864.1| 95|Caenorhabditis elegans Hypothetical ... 31 0.52
AL032622-2|CAA21498.1| 95|Caenorhabditis elegans Y66A7A.3 prot... 31 0.52
Z92828-5|CAB07332.2| 586|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 29 1.6
X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein. 29 1.6
AF468834-1|AAL77082.1| 586|Caenorhabditis elegans PRY-1 protein. 29 1.6
AF043704-2|AAX88816.1| 407|Caenorhabditis elegans Prion-like-(q... 28 4.8
Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 27 6.4
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 27 6.4
AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical ... 27 6.4
AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protei... 27 6.4
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 27 8.5
U23484-9|AAC46771.1| 304|Caenorhabditis elegans Hypothetical pr... 27 8.5
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 27 8.5
>AL590343-3|CAC35864.1| 95|Caenorhabditis elegans Hypothetical
protein Y66A7A.3 protein.
Length = 95
Score = 31.1 bits (67), Expect = 0.52
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Frame = +2
Query: 68 RNQIWGFNPSESIRFSGHVPYGFQRFGESSKKLTNSALCDFSSNYRRRQSTEWAPVNVV- 244
+ Q G N SE +F HVP G ++KK +C F + + P + +
Sbjct: 20 KRQNSGINISEICKFFEHVPLSCAALGLATKKNFGGEICAFKERKIKNYCKIFEPKSALF 79
Query: 245 -KPDPPLSI 268
P PPL +
Sbjct: 80 QTPPPPLIV 88
>AL032622-2|CAA21498.1| 95|Caenorhabditis elegans Y66A7A.3
protein.
Length = 95
Score = 31.1 bits (67), Expect = 0.52
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Frame = +2
Query: 68 RNQIWGFNPSESIRFSGHVPYGFQRFGESSKKLTNSALCDFSSNYRRRQSTEWAPVNVV- 244
+ Q G N SE +F HVP G ++KK +C F + + P + +
Sbjct: 20 KRQNSGINISEICKFFEHVPLSCAALGLATKKNFGGEICAFKERKIKNYCKIFEPKSALF 79
Query: 245 -KPDPPLSI 268
P PPL +
Sbjct: 80 QTPPPPLIV 88
>Z92828-5|CAB07332.2| 586|Caenorhabditis elegans Hypothetical
protein C37A5.9 protein.
Length = 586
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 288 ISTSVCCPTTQVTCQAASSDSEKPTATTRETLSVGSEETS 407
+S S+C P+ + S DS P TTR + GS ++S
Sbjct: 420 MSQSMCAPSYSSASSSYSRDSFAPAPTTRVNFAPGSSKSS 459
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 29.5 bits (63), Expect = 1.6
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +3
Query: 282 STISTSVCCPTTQVTCQAASSDSEKPTATTRETLSVGSEETSHLRRKEFT 431
+T+ TS PTT A ++ + KPT T ET + S T+ +K T
Sbjct: 498 TTVQTSTTVPTTPSKTTATTTTTPKPTTT--ETATTSSSTTTVTTQKPTT 545
>Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical
protein C29E6.1b protein.
Length = 653
Score = 29.5 bits (63), Expect = 1.6
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +3
Query: 282 STISTSVCCPTTQVTCQAASSDSEKPTATTRETLSVGSEETSHLRRKEFT 431
+T+ TS PTT A ++ + KPT T ET + S T+ +K T
Sbjct: 339 TTVQTSTTVPTTPSKTTATTTTTPKPTTT--ETATTSSSTTTVTTQKPTT 386
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/51 (27%), Positives = 29/51 (56%)
Frame = +3
Query: 282 STISTSVCCPTTQVTCQAASSDSEKPTATTRETLSVGSEETSHLRRKEFTS 434
ST++TS P+T T ++SS + TA++ + + S ++S ++ T+
Sbjct: 487 STVTTSTTAPSTSTTGPSSSSSTPSSTASSSVSSTASSTQSSTSTQQSSTT 537
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/51 (27%), Positives = 29/51 (56%)
Frame = +3
Query: 282 STISTSVCCPTTQVTCQAASSDSEKPTATTRETLSVGSEETSHLRRKEFTS 434
ST++TS P+T T ++SS + TA++ + + S ++S ++ T+
Sbjct: 487 STVTTSTTAPSTSTTGPSSSSSTPSSTASSSVSSTASSTQSSTSTQQSSTT 537
>X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein.
Length = 693
Score = 29.5 bits (63), Expect = 1.6
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +3
Query: 282 STISTSVCCPTTQVTCQAASSDSEKPTATTRETLSVGSEETSHLRRKEFT 431
+T+ TS PTT A ++ + KPT T ET + S T+ +K T
Sbjct: 379 TTVQTSTTVPTTPSKTTATTTTTPKPTTT--ETATTSSSTTTVTTQKPTT 426
>AF468834-1|AAL77082.1| 586|Caenorhabditis elegans PRY-1 protein.
Length = 586
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 288 ISTSVCCPTTQVTCQAASSDSEKPTATTRETLSVGSEETS 407
+S S+C P+ + S DS P TTR + GS ++S
Sbjct: 420 MSQSMCAPSYSSASSSYSRDSFAPAPTTRVNFAPGSSKSS 459
>AF043704-2|AAX88816.1| 407|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 72
protein.
Length = 407
Score = 27.9 bits (59), Expect = 4.8
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +3
Query: 309 PTTQVTCQAASSDSEKPTATTRETLSVGSEETSHLRRKEF 428
P T T + ++ SE+PT T T + ++ T L +EF
Sbjct: 266 PITTTTAETTTTTSEEPTVTEETTTELVTDVTIALPDEEF 305
>Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 27.5 bits (58), Expect = 6.4
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +3
Query: 321 VTCQAASSDSEKPTATTRETL--SVGSEETSHLRRKEFTS*IYVRNRYNR 464
VT +A +DS+ P + EET H R E T I+ +++R
Sbjct: 1239 VTVKAIDTDSDGPQNEVHYRIVGEANGEETKHFRIDELTGEIFPNEKFDR 1288
>Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 27.5 bits (58), Expect = 6.4
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +3
Query: 321 VTCQAASSDSEKPTATTRETL--SVGSEETSHLRRKEFTS*IYVRNRYNR 464
VT +A +DS+ P + EET H R E T I+ +++R
Sbjct: 1239 VTVKAIDTDSDGPQNEVHYRIVGEANGEETKHFRIDELTGEIFPNEKFDR 1288
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical protein
F53B7.5b protein.
Length = 2892
Score = 27.5 bits (58), Expect = 6.4
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +3
Query: 285 TISTSVCCPTTQVTCQAASSDSEKPTATTRETLSVGSEETS 407
T+ TS+ C T AA++ + P ATT T + TS
Sbjct: 2775 TVITSLSCGTVAPATTAATTTTLAPAATTTSTAAASDCSTS 2815
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical protein
F53B7.5a protein.
Length = 3095
Score = 27.5 bits (58), Expect = 6.4
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +3
Query: 285 TISTSVCCPTTQVTCQAASSDSEKPTATTRETLSVGSEETS 407
T+ TS+ C T AA++ + P ATT T + TS
Sbjct: 2775 TVITSLSCGTVAPATTAATTTTLAPAATTTSTAAASDCSTS 2815
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 27.5 bits (58), Expect = 6.4
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +3
Query: 285 TISTSVCCPTTQVTCQAASSDSEKPTATTRETLSVGSEETS 407
T+ TS+ C T AA++ + P ATT T + TS
Sbjct: 2775 TVITSLSCGTVAPATTAATTTTLAPAATTTSTAAASDCSTS 2815
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 27.5 bits (58), Expect = 6.4
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +3
Query: 285 TISTSVCCPTTQVTCQAASSDSEKPTATTRETLSVGSEETS 407
T+ TS+ C T AA++ + P ATT T + TS
Sbjct: 2775 TVITSLSCGTVAPATTAATTTTLAPAATTTSTAAASDCSTS 2815
>AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical
protein W02B9.1b protein.
Length = 2920
Score = 27.5 bits (58), Expect = 6.4
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +3
Query: 321 VTCQAASSDSEKPTATTRETL--SVGSEETSHLRRKEFTS*IYVRNRYNR 464
VT +A +DS+ P + EET H R E T I+ +++R
Sbjct: 1239 VTVKAIDTDSDGPQNEVHYRIVGEANGEETKHFRIDELTGEIFPNEKFDR 1288
>AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protein
protein.
Length = 2920
Score = 27.5 bits (58), Expect = 6.4
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +3
Query: 321 VTCQAASSDSEKPTATTRETL--SVGSEETSHLRRKEFTS*IYVRNRYNR 464
VT +A +DS+ P + EET H R E T I+ +++R
Sbjct: 1239 VTVKAIDTDSDGPQNEVHYRIVGEANGEETKHFRIDELTGEIFPNEKFDR 1288
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 27.1 bits (57), Expect = 8.5
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 282 STISTSVCCPTTQVTCQAASSDSEKPTATTRET 380
+T T+ TTQ T ++ + KPT TT T
Sbjct: 328 TTFKTTTITTTTQTTTPTTTATTTKPTTTTPTT 360
>U23484-9|AAC46771.1| 304|Caenorhabditis elegans Hypothetical
protein EEED8.11 protein.
Length = 304
Score = 27.1 bits (57), Expect = 8.5
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 282 STISTSVCCPTTQVTCQAASSDSEKPTATTRETLSVGSEETS 407
ST STS PTT T ++ + PT TT T + E T+
Sbjct: 58 STPSTSTSTPTTTTT--TTTTTTTTPTTTTTTTTTTTPEPTT 97
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 27.1 bits (57), Expect = 8.5
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +3
Query: 282 STISTSVCCPTTQVTCQAASSDSEKPTATTRETLSVGSEETS 407
ST+ST P+T + +ASS + +T T S G+ E+S
Sbjct: 580 STVSTVSSQPSTYIPVSSASSIYSTLSGSTGSTASPGTTESS 621
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,722,864
Number of Sequences: 27780
Number of extensions: 243379
Number of successful extensions: 764
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 763
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1060113800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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