BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte17c02
(632 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM294849-1|CAL26835.1| 192|Drosophila melanogaster CG9893 protein. 54 1e-07
AY061216-1|AAL28764.1| 192|Drosophila melanogaster LD16285p pro... 54 2e-07
AM294857-1|CAL26843.1| 192|Drosophila melanogaster CG9893 protein. 54 2e-07
AM294856-1|CAL26842.1| 192|Drosophila melanogaster CG9893 protein. 54 2e-07
AM294855-1|CAL26841.1| 192|Drosophila melanogaster CG9893 protein. 54 2e-07
AM294854-1|CAL26840.1| 192|Drosophila melanogaster CG9893 protein. 54 2e-07
AM294853-1|CAL26839.1| 192|Drosophila melanogaster CG9893 protein. 54 2e-07
AM294852-1|CAL26838.1| 192|Drosophila melanogaster CG9893 protein. 54 2e-07
AM294851-1|CAL26837.1| 192|Drosophila melanogaster CG9893 protein. 54 2e-07
AM294850-1|CAL26836.1| 192|Drosophila melanogaster CG9893 protein. 54 2e-07
AM294848-1|CAL26834.1| 192|Drosophila melanogaster CG9893 protein. 54 2e-07
AM294847-1|CAL26833.1| 192|Drosophila melanogaster CG9893 protein. 54 2e-07
AM294846-1|CAL26832.1| 192|Drosophila melanogaster CG9893 protein. 54 2e-07
AE013599-3529|AAF46944.1| 192|Drosophila melanogaster CG9893-PA... 54 2e-07
AY113578-1|AAM29583.1| 373|Drosophila melanogaster RH30783p pro... 32 0.56
AE014134-2987|AAF53717.1| 373|Drosophila melanogaster CG17321-P... 32 0.56
AE013599-824|AAF58967.2| 666|Drosophila melanogaster CG8027-PA ... 30 3.0
AY089618-1|AAL90356.1| 666|Drosophila melanogaster RE35033p pro... 29 4.0
AY118657-1|AAM50026.1| 884|Drosophila melanogaster SD08803p pro... 29 5.2
AJ002729-1|CAA05691.2| 884|Drosophila melanogaster importin bet... 29 5.2
AF222745-1|AAF34680.1| 884|Drosophila melanogaster importin bet... 29 5.2
AE014134-3276|AAF53918.1| 884|Drosophila melanogaster CG2637-PA... 29 5.2
>AM294849-1|CAL26835.1| 192|Drosophila melanogaster CG9893 protein.
Length = 192
Score = 54.4 bits (125), Expect = 1e-07
Identities = 33/114 (28%), Positives = 54/114 (47%)
Frame = +3
Query: 90 MDPIAVLQSRIEQLEAKLGLSPEISIDGQQGDSVTANLLSAAQAINNATAGHEKLHEAMQ 269
M+ + +L+ RI+ L LG D + G+ V L SA + AT G L + ++
Sbjct: 1 MEALDILEKRIDALTRVLGPVQ----DSEVGEGVVGALCSAHAILGEATTGSAALQQCVK 56
Query: 270 MASELNNYSDPNFVENLQKNDLHKQEVLAAEPVIRHHCRCMQQCKQATPVLESE 431
+ EL Y DPNF+E Q+ + + A P + +++ KQ P L +E
Sbjct: 57 RSDELEKYLDPNFLEEHQQVRSKEVYLQAVAPELHTQAEQLERIKQLEPALGAE 110
>AY061216-1|AAL28764.1| 192|Drosophila melanogaster LD16285p
protein.
Length = 192
Score = 53.6 bits (123), Expect = 2e-07
Identities = 33/114 (28%), Positives = 54/114 (47%)
Frame = +3
Query: 90 MDPIAVLQSRIEQLEAKLGLSPEISIDGQQGDSVTANLLSAAQAINNATAGHEKLHEAMQ 269
M+ + +L+ RI+ L LG D + G+ V L SA + AT G L + ++
Sbjct: 1 MEALDILEKRIDALTRVLGPVQ----DSEVGEGVVDALCSAHAILGEATTGSAALQQCVK 56
Query: 270 MASELNNYSDPNFVENLQKNDLHKQEVLAAEPVIRHHCRCMQQCKQATPVLESE 431
+ EL Y DPNF+E Q+ + + A P + +++ KQ P L +E
Sbjct: 57 RSDELEKYLDPNFLEEHQQVRSKEVYLQAVAPELHTQAEQLERIKQLEPALGAE 110
>AM294857-1|CAL26843.1| 192|Drosophila melanogaster CG9893 protein.
Length = 192
Score = 53.6 bits (123), Expect = 2e-07
Identities = 33/114 (28%), Positives = 54/114 (47%)
Frame = +3
Query: 90 MDPIAVLQSRIEQLEAKLGLSPEISIDGQQGDSVTANLLSAAQAINNATAGHEKLHEAMQ 269
M+ + +L+ RI+ L LG D + G+ V L SA + AT G L + ++
Sbjct: 1 MEALDILEKRIDALTRVLGPVQ----DSEVGEGVVDALCSAHAILGEATTGSAALQQCVK 56
Query: 270 MASELNNYSDPNFVENLQKNDLHKQEVLAAEPVIRHHCRCMQQCKQATPVLESE 431
+ EL Y DPNF+E Q+ + + A P + +++ KQ P L +E
Sbjct: 57 RSDELEKYLDPNFLEEHQQVRSKEVYLQAVAPELHTQAEQLERIKQLEPALGAE 110
>AM294856-1|CAL26842.1| 192|Drosophila melanogaster CG9893 protein.
Length = 192
Score = 53.6 bits (123), Expect = 2e-07
Identities = 33/114 (28%), Positives = 54/114 (47%)
Frame = +3
Query: 90 MDPIAVLQSRIEQLEAKLGLSPEISIDGQQGDSVTANLLSAAQAINNATAGHEKLHEAMQ 269
M+ + +L+ RI+ L LG D + G+ V L SA + AT G L + ++
Sbjct: 1 MEALDILEKRIDALTRVLGPVQ----DSEVGEGVVDALCSAHAILGEATTGSAALQQCVK 56
Query: 270 MASELNNYSDPNFVENLQKNDLHKQEVLAAEPVIRHHCRCMQQCKQATPVLESE 431
+ EL Y DPNF+E Q+ + + A P + +++ KQ P L +E
Sbjct: 57 RSDELEKYLDPNFLEEHQQVRSKEVYLQAVAPELHTQAEQLERIKQLEPALGAE 110
>AM294855-1|CAL26841.1| 192|Drosophila melanogaster CG9893 protein.
Length = 192
Score = 53.6 bits (123), Expect = 2e-07
Identities = 33/114 (28%), Positives = 54/114 (47%)
Frame = +3
Query: 90 MDPIAVLQSRIEQLEAKLGLSPEISIDGQQGDSVTANLLSAAQAINNATAGHEKLHEAMQ 269
M+ + +L+ RI+ L LG D + G+ V L SA + AT G L + ++
Sbjct: 1 MEALDILEKRIDALTRVLGPVQ----DSEVGEGVVDALCSAHAILGEATTGSAALQQCVK 56
Query: 270 MASELNNYSDPNFVENLQKNDLHKQEVLAAEPVIRHHCRCMQQCKQATPVLESE 431
+ EL Y DPNF+E Q+ + + A P + +++ KQ P L +E
Sbjct: 57 RSDELEKYLDPNFLEEHQQVRSKEVYLQAVAPELHTQAEQLERIKQLEPALGAE 110
>AM294854-1|CAL26840.1| 192|Drosophila melanogaster CG9893 protein.
Length = 192
Score = 53.6 bits (123), Expect = 2e-07
Identities = 33/114 (28%), Positives = 54/114 (47%)
Frame = +3
Query: 90 MDPIAVLQSRIEQLEAKLGLSPEISIDGQQGDSVTANLLSAAQAINNATAGHEKLHEAMQ 269
M+ + +L+ RI+ L LG D + G+ V L SA + AT G L + ++
Sbjct: 1 MEALDILEKRIDALTRVLGPVQ----DSEVGEGVVDALCSAHAILGEATTGSAALQQCVK 56
Query: 270 MASELNNYSDPNFVENLQKNDLHKQEVLAAEPVIRHHCRCMQQCKQATPVLESE 431
+ EL Y DPNF+E Q+ + + A P + +++ KQ P L +E
Sbjct: 57 RSDELEKYLDPNFLEEHQQVRSKEVYLQAVAPELHTQAEQLERIKQLEPALGAE 110
>AM294853-1|CAL26839.1| 192|Drosophila melanogaster CG9893 protein.
Length = 192
Score = 53.6 bits (123), Expect = 2e-07
Identities = 33/114 (28%), Positives = 54/114 (47%)
Frame = +3
Query: 90 MDPIAVLQSRIEQLEAKLGLSPEISIDGQQGDSVTANLLSAAQAINNATAGHEKLHEAMQ 269
M+ + +L+ RI+ L LG D + G+ V L SA + AT G L + ++
Sbjct: 1 MEALDILEKRIDALTRVLGPVQ----DSEVGEGVVDALCSAHAILGEATTGSAALQQCVK 56
Query: 270 MASELNNYSDPNFVENLQKNDLHKQEVLAAEPVIRHHCRCMQQCKQATPVLESE 431
+ EL Y DPNF+E Q+ + + A P + +++ KQ P L +E
Sbjct: 57 RSDELEKYLDPNFLEEHQQVRSKEVYLQAVAPELHTQAEQLERIKQLEPALGAE 110
>AM294852-1|CAL26838.1| 192|Drosophila melanogaster CG9893 protein.
Length = 192
Score = 53.6 bits (123), Expect = 2e-07
Identities = 33/114 (28%), Positives = 54/114 (47%)
Frame = +3
Query: 90 MDPIAVLQSRIEQLEAKLGLSPEISIDGQQGDSVTANLLSAAQAINNATAGHEKLHEAMQ 269
M+ + +L+ RI+ L LG D + G+ V L SA + AT G L + ++
Sbjct: 1 MEALDILEKRIDALTRVLGPVQ----DSEVGEGVVDALCSAHAILGEATTGSAALQQCVK 56
Query: 270 MASELNNYSDPNFVENLQKNDLHKQEVLAAEPVIRHHCRCMQQCKQATPVLESE 431
+ EL Y DPNF+E Q+ + + A P + +++ KQ P L +E
Sbjct: 57 RSDELEKYLDPNFLEEHQQVRSKEVYLQAVAPELHTQAEQLERIKQLEPALGAE 110
>AM294851-1|CAL26837.1| 192|Drosophila melanogaster CG9893 protein.
Length = 192
Score = 53.6 bits (123), Expect = 2e-07
Identities = 33/114 (28%), Positives = 54/114 (47%)
Frame = +3
Query: 90 MDPIAVLQSRIEQLEAKLGLSPEISIDGQQGDSVTANLLSAAQAINNATAGHEKLHEAMQ 269
M+ + +L+ RI+ L LG D + G+ V L SA + AT G L + ++
Sbjct: 1 MEALDILEKRIDALTRVLGPVQ----DSEVGEGVVDALCSAHAILGEATTGSAALQQCVK 56
Query: 270 MASELNNYSDPNFVENLQKNDLHKQEVLAAEPVIRHHCRCMQQCKQATPVLESE 431
+ EL Y DPNF+E Q+ + + A P + +++ KQ P L +E
Sbjct: 57 RSDELEKYLDPNFLEEHQQVRSKEVYLQAVAPELHTQAEQLERIKQLEPALGAE 110
>AM294850-1|CAL26836.1| 192|Drosophila melanogaster CG9893 protein.
Length = 192
Score = 53.6 bits (123), Expect = 2e-07
Identities = 33/114 (28%), Positives = 54/114 (47%)
Frame = +3
Query: 90 MDPIAVLQSRIEQLEAKLGLSPEISIDGQQGDSVTANLLSAAQAINNATAGHEKLHEAMQ 269
M+ + +L+ RI+ L LG D + G+ V L SA + AT G L + ++
Sbjct: 1 MEALDILEKRIDALTRVLGPVQ----DSEVGEGVVDALCSAHAILGEATTGSAALQQCVK 56
Query: 270 MASELNNYSDPNFVENLQKNDLHKQEVLAAEPVIRHHCRCMQQCKQATPVLESE 431
+ EL Y DPNF+E Q+ + + A P + +++ KQ P L +E
Sbjct: 57 RSDELEKYLDPNFLEEHQQVRSKEVYLQAVAPELHTQAEQLERIKQLEPALGAE 110
>AM294848-1|CAL26834.1| 192|Drosophila melanogaster CG9893 protein.
Length = 192
Score = 53.6 bits (123), Expect = 2e-07
Identities = 33/114 (28%), Positives = 54/114 (47%)
Frame = +3
Query: 90 MDPIAVLQSRIEQLEAKLGLSPEISIDGQQGDSVTANLLSAAQAINNATAGHEKLHEAMQ 269
M+ + +L+ RI+ L LG D + G+ V L SA + AT G L + ++
Sbjct: 1 MEALDILEKRIDALTRVLGPVQ----DSEVGEGVVDALCSAHAILGEATTGSAALQQCVK 56
Query: 270 MASELNNYSDPNFVENLQKNDLHKQEVLAAEPVIRHHCRCMQQCKQATPVLESE 431
+ EL Y DPNF+E Q+ + + A P + +++ KQ P L +E
Sbjct: 57 RSDELEKYLDPNFLEEHQQVRSKEVYLQAVAPELHTQAEQLERIKQLEPALGAE 110
>AM294847-1|CAL26833.1| 192|Drosophila melanogaster CG9893 protein.
Length = 192
Score = 53.6 bits (123), Expect = 2e-07
Identities = 33/114 (28%), Positives = 54/114 (47%)
Frame = +3
Query: 90 MDPIAVLQSRIEQLEAKLGLSPEISIDGQQGDSVTANLLSAAQAINNATAGHEKLHEAMQ 269
M+ + +L+ RI+ L LG D + G+ V L SA + AT G L + ++
Sbjct: 1 MEALDILEKRIDALTRVLGPVQ----DSEVGEGVVDALCSAHAILGEATTGSAALQQCVK 56
Query: 270 MASELNNYSDPNFVENLQKNDLHKQEVLAAEPVIRHHCRCMQQCKQATPVLESE 431
+ EL Y DPNF+E Q+ + + A P + +++ KQ P L +E
Sbjct: 57 RSDELEKYLDPNFLEEHQQVRSKEVYLQAVAPELHTQAEQLERIKQLEPALGAE 110
>AM294846-1|CAL26832.1| 192|Drosophila melanogaster CG9893 protein.
Length = 192
Score = 53.6 bits (123), Expect = 2e-07
Identities = 33/114 (28%), Positives = 54/114 (47%)
Frame = +3
Query: 90 MDPIAVLQSRIEQLEAKLGLSPEISIDGQQGDSVTANLLSAAQAINNATAGHEKLHEAMQ 269
M+ + +L+ RI+ L LG D + G+ V L SA + AT G L + ++
Sbjct: 1 MEALDILEKRIDALTRVLGPVQ----DSEVGEGVVDALCSAHAILGEATTGSAALQQCVK 56
Query: 270 MASELNNYSDPNFVENLQKNDLHKQEVLAAEPVIRHHCRCMQQCKQATPVLESE 431
+ EL Y DPNF+E Q+ + + A P + +++ KQ P L +E
Sbjct: 57 RSDELEKYLDPNFLEEHQQVRSKEVYLQAVAPELHTQAEQLERIKQLEPALGAE 110
>AE013599-3529|AAF46944.1| 192|Drosophila melanogaster CG9893-PA
protein.
Length = 192
Score = 53.6 bits (123), Expect = 2e-07
Identities = 33/114 (28%), Positives = 54/114 (47%)
Frame = +3
Query: 90 MDPIAVLQSRIEQLEAKLGLSPEISIDGQQGDSVTANLLSAAQAINNATAGHEKLHEAMQ 269
M+ + +L+ RI+ L LG D + G+ V L SA + AT G L + ++
Sbjct: 1 MEALDILEKRIDALTRVLGPVQ----DSEVGEGVVDALCSAHAILGEATTGSAALQQCVK 56
Query: 270 MASELNNYSDPNFVENLQKNDLHKQEVLAAEPVIRHHCRCMQQCKQATPVLESE 431
+ EL Y DPNF+E Q+ + + A P + +++ KQ P L +E
Sbjct: 57 RSDELEKYLDPNFLEEHQQVRSKEVYLQAVAPELHTQAEQLERIKQLEPALGAE 110
>AY113578-1|AAM29583.1| 373|Drosophila melanogaster RH30783p
protein.
Length = 373
Score = 32.3 bits (70), Expect = 0.56
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -1
Query: 491 CSCSVHLVYSGLHLSSFLYGLRLQNWCCLFTLLHTATVM 375
C CS V GL L + LRL +C LF+LL T ++
Sbjct: 124 CECSAGTVQVGLFLLPLIGRLRLMVFCALFSLLITCLML 162
>AE014134-2987|AAF53717.1| 373|Drosophila melanogaster CG17321-PA
protein.
Length = 373
Score = 32.3 bits (70), Expect = 0.56
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -1
Query: 491 CSCSVHLVYSGLHLSSFLYGLRLQNWCCLFTLLHTATVM 375
C CS V GL L + LRL +C LF+LL T ++
Sbjct: 124 CECSAGTVQVGLFLLPLIGRLRLMVFCALFSLLITCLML 162
>AE013599-824|AAF58967.2| 666|Drosophila melanogaster CG8027-PA
protein.
Length = 666
Score = 29.9 bits (64), Expect = 3.0
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +3
Query: 189 VTANLLSAAQAINNATAGHEKLHEAMQMASELNNYSDPNFVENLQKND 332
V AN LSA++ T G A+ N SDPNF+E++++ D
Sbjct: 41 VVANYLSASE--EGQTGGFSSACTAIDAVYTWVNGSDPNFIEDIRRFD 86
>AY089618-1|AAL90356.1| 666|Drosophila melanogaster RE35033p
protein.
Length = 666
Score = 29.5 bits (63), Expect = 4.0
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +3
Query: 189 VTANLLSAAQAINNATAGHEKLHEAMQMASELNNYSDPNFVENLQKND 332
V AN LSA++ T G A+ N SDPNF+E++++ D
Sbjct: 41 VIANYLSASE--EGQTGGFSSACTAIDAVYTWVNGSDPNFIEDIRRFD 86
>AY118657-1|AAM50026.1| 884|Drosophila melanogaster SD08803p
protein.
Length = 884
Score = 29.1 bits (62), Expect = 5.2
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +3
Query: 246 EKLHEAMQMASELNNYSDPNFVENLQ 323
E+L++ MQM +++NN+SD + +LQ
Sbjct: 561 ERLNQVMQMETQINNHSDRHQFNDLQ 586
>AJ002729-1|CAA05691.2| 884|Drosophila melanogaster importin beta
protein.
Length = 884
Score = 29.1 bits (62), Expect = 5.2
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +3
Query: 246 EKLHEAMQMASELNNYSDPNFVENLQ 323
E+L++ MQM +++NN+SD + +LQ
Sbjct: 561 ERLNQVMQMETQINNHSDRHQFNDLQ 586
>AF222745-1|AAF34680.1| 884|Drosophila melanogaster importin beta
protein.
Length = 884
Score = 29.1 bits (62), Expect = 5.2
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +3
Query: 246 EKLHEAMQMASELNNYSDPNFVENLQ 323
E+L++ MQM +++NN+SD + +LQ
Sbjct: 561 ERLNQVMQMETQINNHSDRHQFNDLQ 586
>AE014134-3276|AAF53918.1| 884|Drosophila melanogaster CG2637-PA
protein.
Length = 884
Score = 29.1 bits (62), Expect = 5.2
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +3
Query: 246 EKLHEAMQMASELNNYSDPNFVENLQ 323
E+L++ MQM +++NN+SD + +LQ
Sbjct: 561 ERLNQVMQMETQINNHSDRHQFNDLQ 586
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,967,618
Number of Sequences: 53049
Number of extensions: 440109
Number of successful extensions: 1262
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1262
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2641708800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -