Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17c01
         (643 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003654-1|AAO39658.1| 1273|Drosophila melanogaster AT04875p pro...    33   0.33 
AE014296-2355|AAF49762.2| 1155|Drosophila melanogaster CG32138-P...    33   0.33 
AE014296-2354|AAF49761.2| 1165|Drosophila melanogaster CG32138-P...    33   0.33 
AY051607-1|AAK93031.1|  394|Drosophila melanogaster GH25014p pro...    29   4.1  
AE014135-147|AAS64612.1| 1579|Drosophila melanogaster CG11148-PC...    29   4.1  
AE014135-146|AAS64611.1| 1579|Drosophila melanogaster CG11148-PB...    29   4.1  
AE014135-145|AAF59406.2| 1572|Drosophila melanogaster CG11148-PA...    29   4.1  
M17730-1|AAA28856.1|  378|Drosophila melanogaster protein ( D.me...    29   7.1  
AY113582-1|AAM29587.1|  230|Drosophila melanogaster RH33063p pro...    29   7.1  
AE014296-2812|AAF49400.1|  378|Drosophila melanogaster CG9668-PA...    29   7.1  

>BT003654-1|AAO39658.1| 1273|Drosophila melanogaster AT04875p
           protein.
          Length = 1273

 Score = 33.1 bits (72), Expect = 0.33
 Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
 Frame = +3

Query: 348 KYRAKDRIDELLNESKEAIRQTNEFLEKW-RLRRVSAPLMTSRKYPLDSVSRLIPTDFSY 524
           K  A +R+ EL ++ +  I + +EFL K+  L   S  L T R+  L  + + +  + + 
Sbjct: 575 KTSALERVQELEDQLEREIDRNSEFLYKYAELESESLTLKTEREQ-LAMIRQKLEEELTV 633

Query: 525 LDEEPQEIKP-LKLEVPILHMAIIDTLGTTRSLPESGDAG 641
           +    Q  +  LK    +LH   ++    +RSLP S  +G
Sbjct: 634 MQRMLQHNEQELKKRDTLLHTKNMELQTLSRSLPRSASSG 673


>AE014296-2355|AAF49762.2| 1155|Drosophila melanogaster CG32138-PB,
           isoform B protein.
          Length = 1155

 Score = 33.1 bits (72), Expect = 0.33
 Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
 Frame = +3

Query: 348 KYRAKDRIDELLNESKEAIRQTNEFLEKW-RLRRVSAPLMTSRKYPLDSVSRLIPTDFSY 524
           K  A +R+ EL ++ +  I + +EFL K+  L   S  L T R+  L  + + +  + + 
Sbjct: 485 KTSALERVQELEDQLEREIDRNSEFLYKYAELESESLTLKTEREQ-LAMIRQKLEEELTV 543

Query: 525 LDEEPQEIKP-LKLEVPILHMAIIDTLGTTRSLPESGDAG 641
           +    Q  +  LK    +LH   ++    +RSLP S  +G
Sbjct: 544 MQRMLQHNEQELKKRDTLLHTKNMELQTLSRSLPRSASSG 583


>AE014296-2354|AAF49761.2| 1165|Drosophila melanogaster CG32138-PA,
           isoform A protein.
          Length = 1165

 Score = 33.1 bits (72), Expect = 0.33
 Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
 Frame = +3

Query: 348 KYRAKDRIDELLNESKEAIRQTNEFLEKW-RLRRVSAPLMTSRKYPLDSVSRLIPTDFSY 524
           K  A +R+ EL ++ +  I + +EFL K+  L   S  L T R+  L  + + +  + + 
Sbjct: 485 KTSALERVQELEDQLEREIDRNSEFLYKYAELESESLTLKTEREQ-LAMIRQKLEEELTV 543

Query: 525 LDEEPQEIKP-LKLEVPILHMAIIDTLGTTRSLPESGDAG 641
           +    Q  +  LK    +LH   ++    +RSLP S  +G
Sbjct: 544 MQRMLQHNEQELKKRDTLLHTKNMELQTLSRSLPRSASSG 583


>AY051607-1|AAK93031.1|  394|Drosophila melanogaster GH25014p
           protein.
          Length = 394

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = +3

Query: 354 RAKDRIDELLNESKEAIRQTNEFLEKWRLRRVSAPLMTSRKYPLDSVSRL 503
           R ++ +D+ L  +  A  + N+ L KW+    SAP+M+  +   +   RL
Sbjct: 24  RHQELLDKQLRANAAAAAEANDALLKWQSTPASAPVMSLAEIQAEEARRL 73


>AE014135-147|AAS64612.1| 1579|Drosophila melanogaster CG11148-PC,
            isoform C protein.
          Length = 1579

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = +3

Query: 354  RAKDRIDELLNESKEAIRQTNEFLEKWRLRRVSAPLMTSRKYPLDSVSRL 503
            R ++ +D+ L  +  A  + N+ L KW+    SAP+M+  +   +   RL
Sbjct: 1204 RHQELLDKQLRANAAAAAEANDALLKWQSTPASAPVMSLAEIQAEEARRL 1253


>AE014135-146|AAS64611.1| 1579|Drosophila melanogaster CG11148-PB,
            isoform B protein.
          Length = 1579

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = +3

Query: 354  RAKDRIDELLNESKEAIRQTNEFLEKWRLRRVSAPLMTSRKYPLDSVSRL 503
            R ++ +D+ L  +  A  + N+ L KW+    SAP+M+  +   +   RL
Sbjct: 1204 RHQELLDKQLRANAAAAAEANDALLKWQSTPASAPVMSLAEIQAEEARRL 1253


>AE014135-145|AAF59406.2| 1572|Drosophila melanogaster CG11148-PA,
            isoform A protein.
          Length = 1572

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = +3

Query: 354  RAKDRIDELLNESKEAIRQTNEFLEKWRLRRVSAPLMTSRKYPLDSVSRL 503
            R ++ +D+ L  +  A  + N+ L KW+    SAP+M+  +   +   RL
Sbjct: 1197 RHQELLDKQLRANAAAAAEANDALLKWQSTPASAPVMSLAEIQAEEARRL 1246


>M17730-1|AAA28856.1|  378|Drosophila melanogaster protein (
           D.melanogaster opsinRh4 gene, exon 2. ).
          Length = 378

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = -1

Query: 328 AIVNDKTSISMNMTGMLIGFSLPTNCVFFASSRNVFFTKQAILQNIVW 185
           A +   + I   MT   IG+    N +    +RN+ FTK  I+  I+W
Sbjct: 130 ASIGSYSGIGAGMTNAAIGYDR-YNVITKPMNRNMTFTKAVIMNIIIW 176


>AY113582-1|AAM29587.1|  230|Drosophila melanogaster RH33063p
           protein.
          Length = 230

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = -1

Query: 328 AIVNDKTSISMNMTGMLIGFSLPTNCVFFASSRNVFFTKQAILQNIVW 185
           A +   + I   MT   IG+    N +    +RN+ FTK  I+  I+W
Sbjct: 130 ASIGSYSGIGAGMTNAAIGYDR-YNVITKPMNRNMTFTKAVIMNIIIW 176


>AE014296-2812|AAF49400.1|  378|Drosophila melanogaster CG9668-PA
           protein.
          Length = 378

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = -1

Query: 328 AIVNDKTSISMNMTGMLIGFSLPTNCVFFASSRNVFFTKQAILQNIVW 185
           A +   + I   MT   IG+    N +    +RN+ FTK  I+  I+W
Sbjct: 130 ASIGSYSGIGAGMTNAAIGYDR-YNVITKPMNRNMTFTKAVIMNIIIW 176


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,572,537
Number of Sequences: 53049
Number of extensions: 588683
Number of successful extensions: 1579
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1579
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)