Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte17c01
(643 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U10414-9|AAA19072.1| 712|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z99280-1|CAB16499.1| 225|Caenorhabditis elegans Hypothetical pr... 31 0.53
AF036702-8|AAR85905.1| 377|Caenorhabditis elegans Hypothetical ... 30 1.2
Z93378-7|CAB07587.1| 605|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z93375-5|CAB07566.1| 605|Caenorhabditis elegans Hypothetical pr... 29 3.7
U64608-2|AAB04591.1| 537|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z92838-3|CAB07409.2| 440|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z74040-1|CAA98514.2| 340|Caenorhabditis elegans Hypothetical pr... 27 8.6
AF098997-2|AAC68722.2| 796|Caenorhabditis elegans Hypothetical ... 27 8.6
AF038618-1|AAB92068.2| 386|Caenorhabditis elegans Hypothetical ... 27 8.6
>U10414-9|AAA19072.1| 712|Caenorhabditis elegans Hypothetical
protein F42A10.1 protein.
Length = 712
Score = 32.7 bits (71), Expect = 0.23
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +3
Query: 387 ESKEAIRQ-TNEFLEKWRLRRVSAPLMTSRKYPLDSVSRLIPTD 515
ES++ +RQ T EF++K+R AP++ SR L+ + L+P +
Sbjct: 433 ESQQQLRQHTQEFIDKFRYNAKRAPMVQSRIKMLEKLPVLLPVE 476
>Z99280-1|CAB16499.1| 225|Caenorhabditis elegans Hypothetical
protein Y57G11B.5 protein.
Length = 225
Score = 31.5 bits (68), Expect = 0.53
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Frame = +3
Query: 117 YTFVFLSLFLVDYLLGNGFVDMFQTIFCKIACFVKKTLREEAKKTQLV-GKENPISIPVI 293
YT LS +D L G F + Q +CF K EE++K + G + + I
Sbjct: 133 YTACVLSEVPMDQLQGFTFKTVLQYAKPVTSCFAKHQECEESEKAEFYKGMMASVELVDI 192
Query: 294 FIEIL--VLSLTIAFLNKY-KKYRAKDRIDEL 380
F+ IL V S + F++ + KK+ KD +D L
Sbjct: 193 FVPILEAVHSGNLEFIHTFDKKFNPKD-LDNL 223
>AF036702-8|AAR85905.1| 377|Caenorhabditis elegans Hypothetical
protein F33D4.5 protein.
Length = 377
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +3
Query: 387 ESKEAIRQTNEFLEKWRLRRVSAPLMTSRKYPLDSVSRLIPTDFSYLDEEP 539
E KEA R+ F+EK +RR+ L S+++P RL D + L E+P
Sbjct: 51 EEKEAARKQYSFMEKINIRRMKNLLSPSQQFP----GRLNIDDEANLPEKP 97
>Z93378-7|CAB07587.1| 605|Caenorhabditis elegans Hypothetical
protein C38C6.6 protein.
Length = 605
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/61 (24%), Positives = 29/61 (47%)
Frame = +3
Query: 447 VSAPLMTSRKYPLDSVSRLIPTDFSYLDEEPQEIKPLKLEVPILHMAIIDTLGTTRSLPE 626
VSA + L+ + I D S+LD++ +E++ + L+ ++D L T +
Sbjct: 16 VSAQSLVPNHVSLNEKRKHIEVDSSWLDKKQKEVQRVSLDASNKEKVVLDLLNTQQKFSA 75
Query: 627 S 629
S
Sbjct: 76 S 76
>Z93375-5|CAB07566.1| 605|Caenorhabditis elegans Hypothetical
protein C38C6.6 protein.
Length = 605
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/61 (24%), Positives = 29/61 (47%)
Frame = +3
Query: 447 VSAPLMTSRKYPLDSVSRLIPTDFSYLDEEPQEIKPLKLEVPILHMAIIDTLGTTRSLPE 626
VSA + L+ + I D S+LD++ +E++ + L+ ++D L T +
Sbjct: 16 VSAQSLVPNHVSLNEKRKHIEVDSSWLDKKQKEVQRVSLDASNKEKVVLDLLNTQQKFSA 75
Query: 627 S 629
S
Sbjct: 76 S 76
>U64608-2|AAB04591.1| 537|Caenorhabditis elegans Hypothetical
protein T22B7.4 protein.
Length = 537
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +3
Query: 333 LNKYKKYRAKDRIDELLNESKEAIRQTNEFLEKWRLRRVSAPLMTSRKYPLDSV 494
+NK +K AK + LN+ +E + Q E + +L R +A + K L+++
Sbjct: 64 MNKREKNEAKTLYKKHLNQGQEGMNQLEELINNMKLWRANAINESREKGDLNAI 117
>Z92838-3|CAB07409.2| 440|Caenorhabditis elegans Hypothetical
protein T03D8.4 protein.
Length = 440
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +2
Query: 461 NDLTKISPRFSITLNTYRFFLLGRRTPRNQAFEARSTNTTHGHNR 595
ND+ +++ F ++ R +L R P Q+ R N T+G ++
Sbjct: 165 NDVVEMNDGFPTIMDKNRQIILSRTEPNWQSLNTRKPNQTYGRDQ 209
>Z74040-1|CAA98514.2| 340|Caenorhabditis elegans Hypothetical
protein K10D6.2a protein.
Length = 340
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 225 FSSRNKLSCRISFGTYQRNHCLTNN 151
F S + S ++SF T +R+HC T N
Sbjct: 295 FESTHPSSIKMSFHTEERSHCSTTN 319
>AF098997-2|AAC68722.2| 796|Caenorhabditis elegans Hypothetical
protein T10D4.6 protein.
Length = 796
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 455 AFNDLTKISPRFSITLNTYRFFLLGRRTPRNQAFE 559
A +L KI LN Y +++GRRT NQ E
Sbjct: 335 AEEELDKIPFEVKKNLNIYFHYIIGRRTTDNQKIE 369
>AF038618-1|AAB92068.2| 386|Caenorhabditis elegans Hypothetical
protein F42G8.9 protein.
Length = 386
Score = 27.5 bits (58), Expect = 8.6
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +2
Query: 440 AEGIGAFNDLTKISPRFSITLN 505
++ +G FN + KI PR S++L+
Sbjct: 269 SDSVGTFNSMEKIEPRVSVSLD 290
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,013,971
Number of Sequences: 27780
Number of extensions: 317736
Number of successful extensions: 984
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 984
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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