Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17b24
         (710 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ004402-1|AAY21241.1|  144|Anopheles gambiae lysozyme c-8 protein.    27   0.58 
AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    25   3.1  
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    25   3.1  
AY659930-1|AAT51798.2|  144|Anopheles gambiae lysozyme c-3 protein.    24   5.4  

>DQ004402-1|AAY21241.1|  144|Anopheles gambiae lysozyme c-8 protein.
          Length = 144

 Score = 27.1 bits (57), Expect = 0.58
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 294 CTSLDTNNIVDTTSCGLFLY 235
           C+SL  +NI D   C LF+Y
Sbjct: 94  CSSLRDDNIADDMRCALFIY 113


>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -1

Query: 638 FDNNIFLLVTFVSILIVIEHSLSGML 561
           F NN++  VT VSI+  +   L+G++
Sbjct: 348 FHNNVYRDVTIVSIMDTLTSMLAGLI 373


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -1

Query: 638 FDNNIFLLVTFVSILIVIEHSLSGML 561
           F NN++  VT VSI+  +   L+G++
Sbjct: 348 FHNNVYRDVTIVSIMDTLTSMLAGLI 373


>AY659930-1|AAT51798.2|  144|Anopheles gambiae lysozyme c-3 protein.
          Length = 144

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 294 CTSLDTNNIVDTTSCGLFLY 235
           C+SL  ++I D   C LF+Y
Sbjct: 94  CSSLRDDDIGDDMRCALFIY 113


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 678,981
Number of Sequences: 2352
Number of extensions: 13242
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)