Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17b24
         (710 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3480|AAF56247.3|  306|Drosophila melanogaster CG6182-PA...    30   2.7  
AY058364-1|AAL13593.1|  293|Drosophila melanogaster GH13672p pro...    30   3.6  
AE013599-2150|AAF58085.1|  293|Drosophila melanogaster CG8314-PA...    30   3.6  
AY061578-1|AAL29126.1|  889|Drosophila melanogaster SD02883p pro...    29   4.7  
AE014296-2904|AAF49347.2|  889|Drosophila melanogaster CG3885-PA...    29   4.7  

>AE014297-3480|AAF56247.3|  306|Drosophila melanogaster CG6182-PA
           protein.
          Length = 306

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 9/53 (16%)
 Frame = +2

Query: 533 QRNNLKIRFEACQITSVLSQSILKQML---------LIKICYYQTIPTSNRNF 664
           +RN   I +E CQI SV  Q  L ++L         L + C   T+P +NR++
Sbjct: 5   ERNFRSIYYEKCQINSVEEQKSLNKLLQDDIRNLSKLKQFCMNYTVPNNNRSY 57


>AY058364-1|AAL13593.1|  293|Drosophila melanogaster GH13672p
           protein.
          Length = 293

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 3/39 (7%)
 Frame = -3

Query: 519 IICVHITFLLINFSKFVFYLILRL---CTIMSTI*SVVF 412
           I+CV +T+LLI F++FV   ++ L    T+ STI  ++F
Sbjct: 39  IVCVIMTWLLILFAEFVVMRLILLPSNYTVFSTINMIIF 77


>AE013599-2150|AAF58085.1|  293|Drosophila melanogaster CG8314-PA
           protein.
          Length = 293

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 3/39 (7%)
 Frame = -3

Query: 519 IICVHITFLLINFSKFVFYLILRL---CTIMSTI*SVVF 412
           I+CV +T+LLI F++FV   ++ L    T+ STI  ++F
Sbjct: 39  IVCVIMTWLLILFAEFVVMRLILLPSNYTVFSTINMIIF 77


>AY061578-1|AAL29126.1|  889|Drosophila melanogaster SD02883p
           protein.
          Length = 889

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -1

Query: 635 DNNIFLLVTFVSILIVIEHSLSGMLQNEFLSCCVVK*NK 519
           D + FL +TF S L+ ++ S    +QN+ LS    K +K
Sbjct: 623 DTHSFLSMTFASALVQVKRSFDRFMQNQLLSIREAKLHK 661


>AE014296-2904|AAF49347.2|  889|Drosophila melanogaster CG3885-PA
           protein.
          Length = 889

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -1

Query: 635 DNNIFLLVTFVSILIVIEHSLSGMLQNEFLSCCVVK*NK 519
           D + FL +TF S L+ ++ S    +QN+ LS    K +K
Sbjct: 623 DTHSFLSMTFASALVQVKRSFDRFMQNQLLSIREAKLHK 661


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,468,707
Number of Sequences: 53049
Number of extensions: 518310
Number of successful extensions: 1416
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1415
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)