Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte17b10
(728 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB065531-1|BAC05778.1| 235|Homo sapiens seven transmembrane hel... 33 1.4
BC009374-1|AAH09374.1| 455|Homo sapiens zinc finger protein 556... 31 3.2
AK021699-1|BAB13878.1| 456|Homo sapiens protein ( Homo sapiens ... 31 3.2
AB065889-1|BAC06106.1| 330|Homo sapiens seven transmembrane hel... 31 5.6
BX005133-2|CAM25847.1| 321|Homo sapiens olfactory receptor fami... 30 7.4
BC069149-1|AAH69149.1| 321|Homo sapiens OR5V1 protein protein. 30 7.4
AL732432-1|CAI17829.1| 321|Homo sapiens olfactory receptor, fam... 30 7.4
AL662781-4|CAI18131.1| 321|Homo sapiens olfactory receptor, fam... 30 7.4
AL096770-3|CAB65797.1| 321|Homo sapiens olfactory receptor, fam... 30 7.4
AJ459859-1|CAD31042.1| 321|Homo sapiens olfactory receptor prot... 30 7.4
>AB065531-1|BAC05778.1| 235|Homo sapiens seven transmembrane helix
receptor protein.
Length = 235
Score = 32.7 bits (71), Expect = 1.4
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +1
Query: 106 YLKICGSIYYHS*SSGKYTGP-RYRMICGCVLGFVTATILFVCLPLCNSKLNKLSCTCNP 282
Y+ IC ++Y S + + G +IC C+L + + L LP C+S L S +
Sbjct: 125 YVAICCPLHYASILTNEVIGRIGLAIICRCILAVLPSLFLLKRLPFCHSHLLSHSYCLHQ 184
Query: 283 NPICSECGEI 312
+ I C +I
Sbjct: 185 DMIRLVCADI 194
>BC009374-1|AAH09374.1| 455|Homo sapiens zinc finger protein 556
protein.
Length = 455
Score = 31.5 bits (68), Expect = 3.2
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +1
Query: 241 CNSKLNKLSCTCNPNPICSECGEIF*GASQFCKPKLSSSVALIMSC 378
CN L K CT CS+CG++F +S + K + S + C
Sbjct: 131 CNRHLRKNCCTSVRRYECSQCGKLFTHSSSLIRHKRAHSGQKLYKC 176
>AK021699-1|BAB13878.1| 456|Homo sapiens protein ( Homo sapiens
cDNA FLJ11637 fis, clone HEMBA1004321, weakly similar to
ZINC FINGER PROTEIN 184. ).
Length = 456
Score = 31.5 bits (68), Expect = 3.2
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +1
Query: 241 CNSKLNKLSCTCNPNPICSECGEIF*GASQFCKPKLSSSVALIMSC 378
CN L K CT CS+CG++F +S + K + S + C
Sbjct: 132 CNRHLRKNCCTSVRRYECSQCGKLFTHSSSLIRHKRAHSGQKLYKC 177
>AB065889-1|BAC06106.1| 330|Homo sapiens seven transmembrane helix
receptor protein.
Length = 330
Score = 30.7 bits (66), Expect = 5.6
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = +1
Query: 103 RYLKICGSIYYHS*SSGKYTGPRYRMICGCVLG----FVTATILFVCLPLCNSKLNKLSC 270
RYL IC ++Y S +GK+ ++C C +G + +L LP C +
Sbjct: 140 RYLAICRPLHYPSIMTGKFC---IILVCVCWVGGFLCYPVPIVLISQLPFCGPNIID-HL 195
Query: 271 TCNPNPI 291
C+P P+
Sbjct: 196 VCDPGPL 202
>BX005133-2|CAM25847.1| 321|Homo sapiens olfactory receptor family
5 subfamily V member 1 protein.
Length = 321
Score = 30.3 bits (65), Expect = 7.4
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = +1
Query: 103 RYLKICGSIYYHS*SSGKYTGPRYRMICGCV--LGFVTATILFVCLPLC-NSKLNKLSCT 273
RY+ IC + Y S K + C L V T+L CLP C N+++N C
Sbjct: 122 RYIAICNPLRY-SVILSKVLCNQLAASCWAAGFLNSVVHTVLTFCLPFCGNNQINYFFCD 180
Query: 274 CNPNPICSECG 306
P I S CG
Sbjct: 181 IPPLLILS-CG 190
>BC069149-1|AAH69149.1| 321|Homo sapiens OR5V1 protein protein.
Length = 321
Score = 30.3 bits (65), Expect = 7.4
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = +1
Query: 103 RYLKICGSIYYHS*SSGKYTGPRYRMICGCV--LGFVTATILFVCLPLC-NSKLNKLSCT 273
RY+ IC + Y S K + C L V T+L CLP C N+++N C
Sbjct: 122 RYIAICNPLRY-SVILSKVLCNQLAASCWAAGFLNSVVHTVLTFCLPFCGNNQINYFFCD 180
Query: 274 CNPNPICSECG 306
P I S CG
Sbjct: 181 IPPLLILS-CG 190
>AL732432-1|CAI17829.1| 321|Homo sapiens olfactory receptor, family
5, subfamily V, member protein.
Length = 321
Score = 30.3 bits (65), Expect = 7.4
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = +1
Query: 103 RYLKICGSIYYHS*SSGKYTGPRYRMICGCV--LGFVTATILFVCLPLC-NSKLNKLSCT 273
RY+ IC + Y S K + C L V T+L CLP C N+++N C
Sbjct: 122 RYIAICNPLRY-SVILSKVLCNQLAASCWAAGFLNSVVHTVLTFCLPFCGNNQINYFFCD 180
Query: 274 CNPNPICSECG 306
P I S CG
Sbjct: 181 IPPLLILS-CG 190
>AL662781-4|CAI18131.1| 321|Homo sapiens olfactory receptor, family
5, subfamily V, memberta protein.
Length = 321
Score = 30.3 bits (65), Expect = 7.4
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = +1
Query: 103 RYLKICGSIYYHS*SSGKYTGPRYRMICGCV--LGFVTATILFVCLPLC-NSKLNKLSCT 273
RY+ IC + Y S K + C L V T+L CLP C N+++N C
Sbjct: 122 RYIAICNPLRY-SVILSKVLCNQLAASCWAAGFLNSVVHTVLTFCLPFCGNNQINYFFCD 180
Query: 274 CNPNPICSECG 306
P I S CG
Sbjct: 181 IPPLLILS-CG 190
>AL096770-3|CAB65797.1| 321|Homo sapiens olfactory receptor, family
5, subfamily V, memberrevisiae) protein.
Length = 321
Score = 30.3 bits (65), Expect = 7.4
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = +1
Query: 103 RYLKICGSIYYHS*SSGKYTGPRYRMICGCV--LGFVTATILFVCLPLC-NSKLNKLSCT 273
RY+ IC + Y S K + C L V T+L CLP C N+++N C
Sbjct: 122 RYIAICNPLRY-SVILSKVLCNQLAASCWAAGFLNSVVHTVLTFCLPFCGNNQINYFFCD 180
Query: 274 CNPNPICSECG 306
P I S CG
Sbjct: 181 IPPLLILS-CG 190
>AJ459859-1|CAD31042.1| 321|Homo sapiens olfactory receptor
protein.
Length = 321
Score = 30.3 bits (65), Expect = 7.4
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = +1
Query: 103 RYLKICGSIYYHS*SSGKYTGPRYRMICGCV--LGFVTATILFVCLPLC-NSKLNKLSCT 273
RY+ IC + Y S K + C L V T+L CLP C N+++N C
Sbjct: 122 RYIAICNPLRY-SVILSKVLCNQLAASCWAAGFLNSVVHTVLTFCLPFCGNNQINYFFCD 180
Query: 274 CNPNPICSECG 306
P I S CG
Sbjct: 181 IPPLLILS-CG 190
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,257,627
Number of Sequences: 237096
Number of extensions: 2129935
Number of successful extensions: 4885
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4883
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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