Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17b10
         (728 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022830-1|AAY55246.1|  669|Drosophila melanogaster IP13337p pro...    30   3.7  
AE014134-2446|AAF53366.2|  648|Drosophila melanogaster CG18146-P...    30   3.7  
AE014134-2445|AAO41187.1|  701|Drosophila melanogaster CG18146-P...    30   3.7  
AY047570-1|AAK77302.1|  941|Drosophila melanogaster GH08340p pro...    29   6.5  
AE014134-2945|AAF53679.1|  941|Drosophila melanogaster CG10413-P...    29   6.5  

>BT022830-1|AAY55246.1|  669|Drosophila melanogaster IP13337p
           protein.
          Length = 669

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
 Frame = +1

Query: 181 ICGCVLGFVTA--TILFVCLPLCNSKLNKLSCTCNPNPICSECGEIF-*GASQFCKPKLS 351
           +C C +G+     T+   C P+CN      +C    +  CSE G +F  G+   C P   
Sbjct: 201 VCACKMGYAHKDNTLASGCEPVCNPPCTNGTCISPGHCACSE-GHVFAEGSRHECVPSCR 259

Query: 352 S 354
           S
Sbjct: 260 S 260



 Score = 29.5 bits (63), Expect = 4.9
 Identities = 16/55 (29%), Positives = 23/55 (41%)
 Frame = +1

Query: 181 ICGCVLGFVTATILFVCLPLCNSKLNKLSCTCNPNPICSECGEIF*GASQFCKPK 345
           IC C LGF+       C P C  K     C  +    C E  ++  G++  C P+
Sbjct: 410 ICQCDLGFIKRWATGTCEPHCPQKCVNSHCLGSGVCRCYEGYKLRPGSTSICDPE 464


>AE014134-2446|AAF53366.2|  648|Drosophila melanogaster CG18146-PA,
           isoform A protein.
          Length = 648

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
 Frame = +1

Query: 181 ICGCVLGFVTA--TILFVCLPLCNSKLNKLSCTCNPNPICSECGEIF-*GASQFCKPKLS 351
           +C C +G+     T+   C P+CN      +C    +  CSE G +F  G+   C P   
Sbjct: 180 VCACKMGYAHKDNTLASGCEPVCNPPCTNGTCISPGHCACSE-GHVFAEGSRHECVPSCR 238

Query: 352 S 354
           S
Sbjct: 239 S 239



 Score = 29.5 bits (63), Expect = 4.9
 Identities = 16/55 (29%), Positives = 23/55 (41%)
 Frame = +1

Query: 181 ICGCVLGFVTATILFVCLPLCNSKLNKLSCTCNPNPICSECGEIF*GASQFCKPK 345
           IC C LGF+       C P C  K     C  +    C E  ++  G++  C P+
Sbjct: 389 ICQCDLGFIKRWATGTCEPHCPQKCVNSHCLGSGVCRCYEGYKLRPGSTSICDPE 443


>AE014134-2445|AAO41187.1|  701|Drosophila melanogaster CG18146-PB,
           isoform B protein.
          Length = 701

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
 Frame = +1

Query: 181 ICGCVLGFVTA--TILFVCLPLCNSKLNKLSCTCNPNPICSECGEIF-*GASQFCKPKLS 351
           +C C +G+     T+   C P+CN      +C    +  CSE G +F  G+   C P   
Sbjct: 233 VCACKMGYAHKDNTLASGCEPVCNPPCTNGTCISPGHCACSE-GHVFAEGSRHECVPSCR 291

Query: 352 S 354
           S
Sbjct: 292 S 292



 Score = 29.5 bits (63), Expect = 4.9
 Identities = 16/55 (29%), Positives = 23/55 (41%)
 Frame = +1

Query: 181 ICGCVLGFVTATILFVCLPLCNSKLNKLSCTCNPNPICSECGEIF*GASQFCKPK 345
           IC C LGF+       C P C  K     C  +    C E  ++  G++  C P+
Sbjct: 442 ICQCDLGFIKRWATGTCEPHCPQKCVNSHCLGSGVCRCYEGYKLRPGSTSICDPE 496


>AY047570-1|AAK77302.1|  941|Drosophila melanogaster GH08340p
           protein.
          Length = 941

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +3

Query: 456 LKKSNNPCVVYN*KRLTSRKIKREKPLKYTDLIPIDIRGKT 578
           L+   N C+  N +RL    I   K +KY D+ PI+I   T
Sbjct: 713 LRMKKNLCLCRNFQRLDKNFISMSKHVKYIDVWPINIFNPT 753


>AE014134-2945|AAF53679.1|  941|Drosophila melanogaster CG10413-PA
           protein.
          Length = 941

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +3

Query: 456 LKKSNNPCVVYN*KRLTSRKIKREKPLKYTDLIPIDIRGKT 578
           L+   N C+  N +RL    I   K +KY D+ PI+I   T
Sbjct: 713 LRMKKNLCLCRNFQRLDKNFISMSKHVKYIDVWPINIFNPT 753


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,608,123
Number of Sequences: 53049
Number of extensions: 705444
Number of successful extensions: 1506
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1506
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)