Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte17b06
(651 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U32989-1|AAB08514.1| 406|Homo sapiens tryptophan oxygenase prot... 57 5e-08
BC005355-1|AAH05355.1| 406|Homo sapiens tryptophan 2,3-dioxygen... 57 5e-08
X06389-1|CAA29686.1| 296|Homo sapiens synaptophysin protein. 32 1.5
U93305-3|AAB92358.1| 313|Homo sapiens synaptophysin protein. 32 1.5
AY882585-1|AAW78659.1| 3080|Homo sapiens G protein-coupled recep... 31 2.7
AY255581-1|AAO85093.1| 1271|Homo sapiens G protein-coupled recep... 31 2.7
AY140954-1|AAN46668.1| 2799|Homo sapiens G-protein coupled recep... 31 2.7
AL161778-2|CAI40998.2| 2875|Homo sapiens G protein-coupled recep... 31 2.7
AL161778-1|CAM21249.1| 3080|Homo sapiens G protein-coupled recep... 31 2.7
AL136167-2|CAM28220.1| 2875|Homo sapiens G protein-coupled recep... 31 2.7
AL136167-1|CAM28221.1| 3080|Homo sapiens G protein-coupled recep... 31 2.7
AL078638-16|CAM21579.1| 2875|Homo sapiens G protein-coupled rece... 31 2.7
AL078638-15|CAM21580.1| 3080|Homo sapiens G protein-coupled rece... 31 2.7
>U32989-1|AAB08514.1| 406|Homo sapiens tryptophan oxygenase
protein.
Length = 406
Score = 57.2 bits (132), Expect = 5e-08
Identities = 30/64 (46%), Positives = 39/64 (60%)
Frame = +2
Query: 326 NHVIMVQRMIXXXXXXXXXXXXXXXXRSTLSDRYKVFLDLFNLSTFLLPRALIPPLDEDM 505
NHV MV RM+ RST+SDRYKVF+DLFNLST+L+PR IP ++ +
Sbjct: 327 NHVCMVHRMLGSKAGTGGSSGYHYL-RSTVSDRYKVFVDLFNLSTYLIPRHWIPKMNPTI 385
Query: 506 KRSL 517
+ L
Sbjct: 386 HKFL 389
>BC005355-1|AAH05355.1| 406|Homo sapiens tryptophan 2,3-dioxygenase
protein.
Length = 406
Score = 57.2 bits (132), Expect = 5e-08
Identities = 30/64 (46%), Positives = 39/64 (60%)
Frame = +2
Query: 326 NHVIMVQRMIXXXXXXXXXXXXXXXXRSTLSDRYKVFLDLFNLSTFLLPRALIPPLDEDM 505
NHV MV RM+ RST+SDRYKVF+DLFNLST+L+PR IP ++ +
Sbjct: 327 NHVCMVHRMLGSKAGTGGSSGYHYL-RSTVSDRYKVFVDLFNLSTYLIPRHWIPKMNPTI 385
Query: 506 KRSL 517
+ L
Sbjct: 386 HKFL 389
>X06389-1|CAA29686.1| 296|Homo sapiens synaptophysin protein.
Length = 296
Score = 32.3 bits (70), Expect = 1.5
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = +1
Query: 124 ISNNYSRISTTEGPLVFVIVRAVAIFTW--RKSVWMQAFYTIYRASN*DIYVKKILKSPH 297
+ N Y +GP++ + AV F W S W + + A++ + +K++
Sbjct: 111 LQNKYRE--NNKGPMLDFLATAVFAFMWLVSSSAWAKGLSDVKMATDPENIIKEMPVCRQ 168
Query: 298 LGNTCFRKRQPRYNG 342
GNTC R P +G
Sbjct: 169 TGNTCKELRDPVTSG 183
>U93305-3|AAB92358.1| 313|Homo sapiens synaptophysin protein.
Length = 313
Score = 32.3 bits (70), Expect = 1.5
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = +1
Query: 124 ISNNYSRISTTEGPLVFVIVRAVAIFTW--RKSVWMQAFYTIYRASN*DIYVKKILKSPH 297
+ N Y +GP++ + AV F W S W + + A++ + +K++
Sbjct: 128 LQNKYRE--NNKGPMLDFLATAVFAFMWLVSSSAWAKGLSDVKMATDPENIIKEMPVCRQ 185
Query: 298 LGNTCFRKRQPRYNG 342
GNTC R P +G
Sbjct: 186 TGNTCKELRDPVTSG 200
>AY882585-1|AAW78659.1| 3080|Homo sapiens G protein-coupled receptor
112 protein.
Length = 3080
Score = 31.5 bits (68), Expect = 2.7
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +2
Query: 407 STLSDRYK--VFLDLFNLSTFLLPRALIPPLDEDMKRSLNL--TWGDNVRENGDET 562
STL+ + V D+ NLS+ + AL+PPLD+ ++ + T GD +R + T
Sbjct: 1037 STLARAFSTSVLSDVSNLSSTTMTTALVPPLDQTASTTIVIVPTHGDLIRTTSEAT 1092
>AY255581-1|AAO85093.1| 1271|Homo sapiens G protein-coupled receptor
GPR112 protein.
Length = 1271
Score = 31.5 bits (68), Expect = 2.7
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +2
Query: 407 STLSDRYK--VFLDLFNLSTFLLPRALIPPLDEDMKRSLNL--TWGDNVRENGDET 562
STL+ + V D+ NLS+ + AL+PPLD+ ++ + T GD +R + T
Sbjct: 695 STLARAFSTSVLSDVSNLSSTTMTTALVPPLDQTASTTIVIVPTHGDLIRTTSEAT 750
>AY140954-1|AAN46668.1| 2799|Homo sapiens G-protein coupled receptor
GPR112 protein.
Length = 2799
Score = 31.5 bits (68), Expect = 2.7
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +2
Query: 407 STLSDRYK--VFLDLFNLSTFLLPRALIPPLDEDMKRSLNL--TWGDNVRENGDET 562
STL+ + V D+ NLS+ + AL+PPLD+ ++ + T GD +R + T
Sbjct: 973 STLARAFSTSVLSDVSNLSSTTMTTALVPPLDQTASTTIVIVPTHGDLIRTTSEAT 1028
>AL161778-2|CAI40998.2| 2875|Homo sapiens G protein-coupled receptor
112 protein.
Length = 2875
Score = 31.5 bits (68), Expect = 2.7
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +2
Query: 407 STLSDRYK--VFLDLFNLSTFLLPRALIPPLDEDMKRSLNL--TWGDNVRENGDET 562
STL+ + V D+ NLS+ + AL+PPLD+ ++ + T GD +R + T
Sbjct: 832 STLARAFSTSVLSDVSNLSSTTMTTALVPPLDQTASTTIVIVPTHGDLIRTTSEAT 887
>AL161778-1|CAM21249.1| 3080|Homo sapiens G protein-coupled receptor
112 protein.
Length = 3080
Score = 31.5 bits (68), Expect = 2.7
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +2
Query: 407 STLSDRYK--VFLDLFNLSTFLLPRALIPPLDEDMKRSLNL--TWGDNVRENGDET 562
STL+ + V D+ NLS+ + AL+PPLD+ ++ + T GD +R + T
Sbjct: 1037 STLARAFSTSVLSDVSNLSSTTMTTALVPPLDQTASTTIVIVPTHGDLIRTTSEAT 1092
>AL136167-2|CAM28220.1| 2875|Homo sapiens G protein-coupled receptor
112 protein.
Length = 2875
Score = 31.5 bits (68), Expect = 2.7
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +2
Query: 407 STLSDRYK--VFLDLFNLSTFLLPRALIPPLDEDMKRSLNL--TWGDNVRENGDET 562
STL+ + V D+ NLS+ + AL+PPLD+ ++ + T GD +R + T
Sbjct: 832 STLARAFSTSVLSDVSNLSSTTMTTALVPPLDQTASTTIVIVPTHGDLIRTTSEAT 887
>AL136167-1|CAM28221.1| 3080|Homo sapiens G protein-coupled receptor
112 protein.
Length = 3080
Score = 31.5 bits (68), Expect = 2.7
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +2
Query: 407 STLSDRYK--VFLDLFNLSTFLLPRALIPPLDEDMKRSLNL--TWGDNVRENGDET 562
STL+ + V D+ NLS+ + AL+PPLD+ ++ + T GD +R + T
Sbjct: 1037 STLARAFSTSVLSDVSNLSSTTMTTALVPPLDQTASTTIVIVPTHGDLIRTTSEAT 1092
>AL078638-16|CAM21579.1| 2875|Homo sapiens G protein-coupled
receptor 112 protein.
Length = 2875
Score = 31.5 bits (68), Expect = 2.7
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +2
Query: 407 STLSDRYK--VFLDLFNLSTFLLPRALIPPLDEDMKRSLNL--TWGDNVRENGDET 562
STL+ + V D+ NLS+ + AL+PPLD+ ++ + T GD +R + T
Sbjct: 832 STLARAFSTSVLSDVSNLSSTTMTTALVPPLDQTASTTIVIVPTHGDLIRTTSEAT 887
>AL078638-15|CAM21580.1| 3080|Homo sapiens G protein-coupled receptor
112 protein.
Length = 3080
Score = 31.5 bits (68), Expect = 2.7
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +2
Query: 407 STLSDRYK--VFLDLFNLSTFLLPRALIPPLDEDMKRSLNL--TWGDNVRENGDET 562
STL+ + V D+ NLS+ + AL+PPLD+ ++ + T GD +R + T
Sbjct: 1037 STLARAFSTSVLSDVSNLSSTTMTTALVPPLDQTASTTIVIVPTHGDLIRTTSEAT 1092
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,191,084
Number of Sequences: 237096
Number of extensions: 1742658
Number of successful extensions: 3093
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3093
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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