Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17b06
         (651 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M34147-1|AAA29014.1|  379|Drosophila melanogaster protein ( D.me...    81   1e-15
AY051478-1|AAK92902.1|  379|Drosophila melanogaster GH14143p pro...    81   1e-15
AE014298-1526|AAF47978.1|  379|Drosophila melanogaster CG2155-PA...    81   1e-15

>M34147-1|AAA29014.1|  379|Drosophila melanogaster protein (
           D.melanogaster vermilionprotein gene, complete cds. ).
          Length = 379

 Score = 81.0 bits (191), Expect = 1e-15
 Identities = 40/64 (62%), Positives = 44/64 (68%)
 Frame = +2

Query: 326 NHVIMVQRMIXXXXXXXXXXXXXXXXRSTLSDRYKVFLDLFNLSTFLLPRALIPPLDEDM 505
           NHVIMVQRMI                RSTLSDRYKVFLDLFNLSTFL+PR  IPPLDE +
Sbjct: 311 NHVIMVQRMIGSQQLGTGGSSGYQYLRSTLSDRYKVFLDLFNLSTFLIPREAIPPLDETI 370

Query: 506 KRSL 517
           ++ L
Sbjct: 371 RKKL 374


>AY051478-1|AAK92902.1|  379|Drosophila melanogaster GH14143p
           protein.
          Length = 379

 Score = 81.0 bits (191), Expect = 1e-15
 Identities = 40/64 (62%), Positives = 44/64 (68%)
 Frame = +2

Query: 326 NHVIMVQRMIXXXXXXXXXXXXXXXXRSTLSDRYKVFLDLFNLSTFLLPRALIPPLDEDM 505
           NHVIMVQRMI                RSTLSDRYKVFLDLFNLSTFL+PR  IPPLDE +
Sbjct: 311 NHVIMVQRMIGSQQLGTGGSSGYQYLRSTLSDRYKVFLDLFNLSTFLIPREAIPPLDETI 370

Query: 506 KRSL 517
           ++ L
Sbjct: 371 RKKL 374


>AE014298-1526|AAF47978.1|  379|Drosophila melanogaster CG2155-PA
           protein.
          Length = 379

 Score = 81.0 bits (191), Expect = 1e-15
 Identities = 40/64 (62%), Positives = 44/64 (68%)
 Frame = +2

Query: 326 NHVIMVQRMIXXXXXXXXXXXXXXXXRSTLSDRYKVFLDLFNLSTFLLPRALIPPLDEDM 505
           NHVIMVQRMI                RSTLSDRYKVFLDLFNLSTFL+PR  IPPLDE +
Sbjct: 311 NHVIMVQRMIGSQQLGTGGSSGYQYLRSTLSDRYKVFLDLFNLSTFLIPREAIPPLDETI 370

Query: 506 KRSL 517
           ++ L
Sbjct: 371 RKKL 374


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,116,581
Number of Sequences: 53049
Number of extensions: 580541
Number of successful extensions: 1124
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1121
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)