Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte17b05
(613 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006830-6|AAK68608.1| 186|Caenorhabditis elegans Hypothetical ... 33 0.21
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 30 1.5
U23448-3|AAO26017.1| 612|Caenorhabditis elegans Egg laying defe... 30 1.5
U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying defe... 30 1.5
U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying defe... 30 1.5
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 30 1.5
AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein. 30 1.5
U21320-6|AAA62538.4| 234|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z27079-1|CAA81593.2| 411|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z69718-3|CAA93538.1| 365|Caenorhabditis elegans Hypothetical pr... 28 4.6
U28971-4|AAK68668.1| 628|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z29094-14|CAJ43434.1| 893|Caenorhabditis elegans Hypothetical p... 27 8.0
Z29094-10|CAD45580.2| 965|Caenorhabditis elegans Hypothetical p... 27 8.0
Z29094-9|CAA82347.3| 960|Caenorhabditis elegans Hypothetical pr... 27 8.0
U70870-1|AAB51198.1| 1404|Caenorhabditis elegans CELF35-1 protein. 27 8.0
U40934-5|AAA81683.2| 1404|Caenorhabditis elegans Hypothetical pr... 27 8.0
AY450852-1|AAR18092.1| 960|Caenorhabditis elegans Tousled-like ... 27 8.0
AF014939-3|AAB63927.1| 831|Caenorhabditis elegans Hypothetical ... 27 8.0
>AC006830-6|AAK68608.1| 186|Caenorhabditis elegans Hypothetical
protein ZK105.1 protein.
Length = 186
Score = 32.7 bits (71), Expect = 0.21
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +2
Query: 71 NVQNLINNSNELSTTTLRICMQLQMHVMWNTIWNYVEIESYEFVQWAQCGEGL 229
N++N ++ N L T I M ++ NY E +Y V +A+C E L
Sbjct: 65 NMKNFVSACNSLHTCFSNIRCDKNKEYMLKSVENYCEFVAYVHVDFAECNEKL 117
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = -2
Query: 369 HRKRRFCKTSSQNGTLRNAKRLNKAAIILCASSTAPTAHNTVGAAVTRP 223
H K + + + TL+ A R+ +AA+ AS PT+ + + +VT P
Sbjct: 3004 HAKGQIEHVNKRYSTLKRAIRIRQAAVRNAASDFGPTSEHFLNQSVTLP 3052
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = -2
Query: 369 HRKRRFCKTSSQNGTLRNAKRLNKAAIILCASSTAPTAHNTVGAAVTRP 223
H K + + + TL+ A R+ +AA+ AS PT+ + + +VT P
Sbjct: 3004 HAKGQIEHVNKRYSTLKRAIRIRQAAVRNAASDFGPTSEHFLNQSVTLP 3052
>U23448-3|AAO26017.1| 612|Caenorhabditis elegans Egg laying
defective protein 27,isoform c protein.
Length = 612
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = -1
Query: 409 HQHRPEM*AVDHHPQEKEILQNQLPKRNPTERETSEQGRDHSLRQQHGANRPQHR 245
HQH+ +M A + Q++ QL +R E+ E+ R H + Q ++ Q +
Sbjct: 376 HQHQQKMIA-EQQQQQRHAAAQQLREREQREQRERERERQHQQQAQQALHQQQQQ 429
>U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying defective
protein 27,isoform b protein.
Length = 1124
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = -1
Query: 409 HQHRPEM*AVDHHPQEKEILQNQLPKRNPTERETSEQGRDHSLRQQHGANRPQHR 245
HQH+ +M A + Q++ QL +R E+ E+ R H + Q ++ Q +
Sbjct: 888 HQHQQKMIA-EQQQQQRHAAAQQLREREQREQRERERERQHQQQAQQALHQQQQQ 941
>U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying defective
protein 27,isoform a protein.
Length = 1129
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = -1
Query: 409 HQHRPEM*AVDHHPQEKEILQNQLPKRNPTERETSEQGRDHSLRQQHGANRPQHR 245
HQH+ +M A + Q++ QL +R E+ E+ R H + Q ++ Q +
Sbjct: 893 HQHQQKMIA-EQQQQQRHAAAQQLREREQREQRERERERQHQQQAQQALHQQQQQ 946
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = -2
Query: 369 HRKRRFCKTSSQNGTLRNAKRLNKAAIILCASSTAPTAHNTVGAAVTRP 223
H K + + + TL+ A R+ +AA+ AS PT+ + + +VT P
Sbjct: 3004 HAKGQIEHVNKRYSTLKRAIRIRQAAVRNAASDFGPTSEHFLNQSVTLP 3052
>AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein.
Length = 1129
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = -1
Query: 409 HQHRPEM*AVDHHPQEKEILQNQLPKRNPTERETSEQGRDHSLRQQHGANRPQHR 245
HQH+ +M A + Q++ QL +R E+ E+ R H + Q ++ Q +
Sbjct: 893 HQHQQKMIA-EQQQQQRHAAAQQLREREQREQRERERERQHQQQAQQALHQQQQQ 946
>U21320-6|AAA62538.4| 234|Caenorhabditis elegans Hypothetical
protein K04G7.11 protein.
Length = 234
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = -1
Query: 433 FDYRFRDFHQHRPEM*AVDHHPQEKEILQNQLPKRNPTERETSE 302
F+ RFRD H+ R +H +E +++LPK + ++E +
Sbjct: 22 FNQRFRDLHKLRQRARKENHEQVVEEDRRSKLPKNHEAKKERDQ 65
>Z27079-1|CAA81593.2| 411|Caenorhabditis elegans Hypothetical
protein T05G5.1 protein.
Length = 411
Score = 29.1 bits (62), Expect = 2.6
Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Frame = -1
Query: 376 HHPQEKEILQNQLPKRNPTERETSEQG-RDHSLRQQHGANRPQHRRGRRDQTFAALCPLN 200
H KE + +R ER EQ RD R+QH A R Q RR++ L
Sbjct: 141 HEQYWKEETARREQQRAEAERRIQEQRVRDDERRRQHEAERSQIEERRREEESRRLAAQR 200
Query: 199 E 197
E
Sbjct: 201 E 201
>Z69718-3|CAA93538.1| 365|Caenorhabditis elegans Hypothetical
protein W06D11.4 protein.
Length = 365
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 76 SKSNQQLE*IVDNHVTHMYATSNACDVEYNM 168
S++NQQ +NHV H+ N C +E M
Sbjct: 14 SRNNQQSVLTKNNHVNHLRQIPNLCSLEITM 44
>U28971-4|AAK68668.1| 628|Caenorhabditis elegans Hypothetical
protein B0244.10 protein.
Length = 628
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +2
Query: 362 FLWMVIYSLHFWAVLVKIAKSVVEYTYTNLDNSVGPE--DAESCQLMQLWVVWMLA 523
F IY + F VL + ++ + D GP D+ESC+L+ W+++ +A
Sbjct: 436 FTLKTIYIIAFAIVLFSVCVAIPFGLFQAADEIDGPIKCDSESCELIVKWLLFCIA 491
>Z29094-14|CAJ43434.1| 893|Caenorhabditis elegans Hypothetical
protein C07A9.3c protein.
Length = 893
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = -1
Query: 412 FHQHRPEM*AVDHHPQEKEILQNQLPKRN---PTERETSEQGRDHSLRQQHGANRPQ 251
+H H+ +M + +H Q+++ Q Q P ++ +Q + S QQ A +PQ
Sbjct: 103 YHNHQQQMQQMHYHQQQQQYQQQQAQHHQMYAPQIQQQQQQPQQQS--QQQSAQQPQ 157
>Z29094-10|CAD45580.2| 965|Caenorhabditis elegans Hypothetical
protein C07A9.3b protein.
Length = 965
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = -1
Query: 412 FHQHRPEM*AVDHHPQEKEILQNQLPKRN---PTERETSEQGRDHSLRQQHGANRPQ 251
+H H+ +M + +H Q+++ Q Q P ++ +Q + S QQ A +PQ
Sbjct: 170 YHNHQQQMQQMHYHQQQQQYQQQQAQHHQMYAPQIQQQQQQPQQQS--QQQSAQQPQ 224
>Z29094-9|CAA82347.3| 960|Caenorhabditis elegans Hypothetical
protein C07A9.3a protein.
Length = 960
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = -1
Query: 412 FHQHRPEM*AVDHHPQEKEILQNQLPKRN---PTERETSEQGRDHSLRQQHGANRPQ 251
+H H+ +M + +H Q+++ Q Q P ++ +Q + S QQ A +PQ
Sbjct: 170 YHNHQQQMQQMHYHQQQQQYQQQQAQHHQMYAPQIQQQQQQPQQQS--QQQSAQQPQ 224
>U70870-1|AAB51198.1| 1404|Caenorhabditis elegans CELF35-1 protein.
Length = 1404
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 474 SSGPTLLSRFV*VYSTTDFAIFTSTAQKCKL*ITIH 367
S G +LL + +YST F +F T C+L + +H
Sbjct: 1059 SLGISLLIGIIILYSTAFFFVFDPTDSVCRLRVILH 1094
>U40934-5|AAA81683.2| 1404|Caenorhabditis elegans Hypothetical protein
F35H10.10 protein.
Length = 1404
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 474 SSGPTLLSRFV*VYSTTDFAIFTSTAQKCKL*ITIH 367
S G +LL + +YST F +F T C+L + +H
Sbjct: 1059 SLGISLLIGIIILYSTAFFFVFDPTDSVCRLRVILH 1094
>AY450852-1|AAR18092.1| 960|Caenorhabditis elegans Tousled-like
kinase protein.
Length = 960
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = -1
Query: 412 FHQHRPEM*AVDHHPQEKEILQNQLPKRN---PTERETSEQGRDHSLRQQHGANRPQ 251
+H H+ +M + +H Q+++ Q Q P ++ +Q + S QQ A +PQ
Sbjct: 170 YHNHQQQMQQMHYHQQQQQYQQQQAQHHQMYAPQIQQQQQQPQQQS--QQQSAQQPQ 224
>AF014939-3|AAB63927.1| 831|Caenorhabditis elegans Hypothetical
protein ZC132.4 protein.
Length = 831
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = -1
Query: 370 PQEKEILQNQLPKRNPTERETSEQGRDHSLRQQHGANRPQHR 245
PQ+ QN+ K++ E++ S + H Q+ G N+ H+
Sbjct: 504 PQQAPTRQNEGDKQDLQEKDHSRSDQAHKDLQKQGQNKRNHK 545
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,061,996
Number of Sequences: 27780
Number of extensions: 302389
Number of successful extensions: 1048
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1047
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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