Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte17b03
(621 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22180-8|CAA80177.2| 107|Caenorhabditis elegans Hypothetical pr... 35 0.054
Z74041-2|CAA98521.1| 237|Caenorhabditis elegans Hypothetical pr... 31 0.66
CU457744-3|CAM36369.1| 247|Caenorhabditis elegans Hypothetical ... 31 0.88
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 29 3.5
L10986-6|AAA28015.1| 262|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z66565-5|CAA91482.2| 766|Caenorhabditis elegans Hypothetical pr... 28 4.7
AL137227-7|CAB70235.1| 787|Caenorhabditis elegans Hypothetical ... 28 4.7
U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical pr... 28 6.2
AF098997-8|AAC68719.3| 335|Caenorhabditis elegans Serpentine re... 28 6.2
Z81558-3|CAB04541.1| 356|Caenorhabditis elegans Hypothetical pr... 27 8.2
U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical pr... 27 8.2
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 27 8.2
AL031632-2|CAA21005.2| 789|Caenorhabditis elegans Hypothetical ... 27 8.2
>Z22180-8|CAA80177.2| 107|Caenorhabditis elegans Hypothetical
protein K11H3.5 protein.
Length = 107
Score = 34.7 bits (76), Expect = 0.054
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +2
Query: 437 EKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVDETYEN 598
EK KIAK+L + K Q+ E L++ + E D E E+K+E + +Y N
Sbjct: 29 EKHKIAKMLQNEQ-KSLQMLEEEQALLEKVVETLSNDIEEKEEKIEKLRRSYTN 81
>Z74041-2|CAA98521.1| 237|Caenorhabditis elegans Hypothetical
protein T03F7.6 protein.
Length = 237
Score = 31.1 bits (67), Expect = 0.66
Identities = 22/57 (38%), Positives = 29/57 (50%)
Frame = +1
Query: 133 IILFLVTVCCIFGYARNVYREFLFVLPSTCLHQNEFISWCFKFIKPTTKPN*KIAKI 303
I LFL C IFG +Y FVL +T L+ + + F+ +TK KIAKI
Sbjct: 140 ISLFLSFWCLIFGIIPFIYLSEYFVLANTTLNLTATV-FPILFLAGSTKIRKKIAKI 195
>CU457744-3|CAM36369.1| 247|Caenorhabditis elegans Hypothetical
protein T06A10.4 protein.
Length = 247
Score = 30.7 bits (66), Expect = 0.88
Identities = 26/105 (24%), Positives = 51/105 (48%)
Frame = +2
Query: 287 KKLQKSSFRPH*IDLTMGASMPMVTKATVYFINNTKPDIIEQFSKMMTDEEKSKIAKLLH 466
+K +K+ +D+ M + K + F N + EQ +K T +K K+AK
Sbjct: 23 EKAKKAIVEIERLDILAKKEMEVAKKHKIEFFANYEEMTAEQKTKAFTFMQK-KMAK--- 78
Query: 467 DVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVDETYENP 601
V+ +Q E SGL +++ +GK E++ +E++++ + P
Sbjct: 79 -VSEYSDQKIEIASGLKVLLKDVYGKFMEEEQKFIENLNKIPKAP 122
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 28.7 bits (61), Expect = 3.5
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +2
Query: 407 EQFSKMMTDEEK-SKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVD 583
E +M+ D EK ++ K + D A N+L L I +K DED ++++
Sbjct: 541 EDIERMINDAEKFAEDDKKVKDKAEARNELESYAYNLKNQIEDKEKLGGKLDEDDKKTIE 600
Query: 584 ETYE 595
E E
Sbjct: 601 EAVE 604
>L10986-6|AAA28015.1| 262|Caenorhabditis elegans Hypothetical
protein F10E9.4 protein.
Length = 262
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +2
Query: 440 KSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVE 574
K + K++ +KE + E + D++EK ++ +EDED E
Sbjct: 218 KGEYVKMIEKAEIKEEEEVEDEADEETDVKEKVKEEEDEDEDMEE 262
>Z66565-5|CAA91482.2| 766|Caenorhabditis elegans Hypothetical
protein T04F8.6 protein.
Length = 766
Score = 28.3 bits (60), Expect = 4.7
Identities = 9/33 (27%), Positives = 22/33 (66%)
Frame = +2
Query: 488 QLPERCSGLVKDIREKFGKDSNEDEDKVESVDE 586
++ ERC G + + EKF + +E + ++E++++
Sbjct: 313 EMEERCRGRIAAMEEKFRMERHEMQKEIENIEK 345
>AL137227-7|CAB70235.1| 787|Caenorhabditis elegans Hypothetical
protein F58D5.6 protein.
Length = 787
Score = 28.3 bits (60), Expect = 4.7
Identities = 19/79 (24%), Positives = 36/79 (45%)
Frame = +2
Query: 227 TKMNSLVGASNL*NQPPNQIKKLQKSSFRPH*IDLTMGASMPMVTKATVYFINNTKPDII 406
+K+N L P ++KL+ +P L++ S+ +++ ++
Sbjct: 306 SKLNKYYEPEKLFTSLPKCVEKLKALKTQPDFDKLSIIDSVVNTFHENARELHDKMSNVH 365
Query: 407 EQFSKMMTDEEKSKIAKLL 463
+FSK+ TDEE KI +L
Sbjct: 366 GEFSKVYTDEEAKKIHNIL 384
>U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical
protein F56C9.10a protein.
Length = 1028
Score = 27.9 bits (59), Expect = 6.2
Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = +2
Query: 392 KPDIIEQFSKMMTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGK--DS-NEDE 562
KP+++E+ + +E+K K+ + + KE + + DS EDE
Sbjct: 49 KPEVLEEVVEKNREEDKEKVEETVAPTIEKEKNISGDLLDFSSSDKSSLSSRPDSPEEDE 108
Query: 563 DKVESVDETYENP 601
D V V+ T +P
Sbjct: 109 DAVPVVNRTTTSP 121
>AF098997-8|AAC68719.3| 335|Caenorhabditis elegans Serpentine
receptor, class i protein54 protein.
Length = 335
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -1
Query: 459 SFAIFDFSSSVIIFENCSMMSGFVLFIKYTVALVTI 352
+F+I++FSS + S++ GF+ F + + LV I
Sbjct: 181 NFSIYEFSSKFLALIIFSILGGFLSFTVFILVLVNI 216
>Z81558-3|CAB04541.1| 356|Caenorhabditis elegans Hypothetical
protein F59D12.3 protein.
Length = 356
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 524 IREKFGKDSNEDEDKVESVDETYENPYIVDK 616
IREK GK+ D + + + YEN Y + K
Sbjct: 318 IREKIGKEMRSDPEAMRLLHLIYENDYRIFK 348
>U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical
protein F56C9.10b protein.
Length = 1031
Score = 27.5 bits (58), Expect = 8.2
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 6/76 (7%)
Frame = +2
Query: 392 KPDIIEQFSKMMTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFG-----KDS-N 553
KP+++E+ + +E+K K+ + + KE + + KDS
Sbjct: 49 KPEVLEEVVEKNREEDKEKVEETVAPTIEKEKNISGDLLDFSSSDKSSLSSRPNVKDSPE 108
Query: 554 EDEDKVESVDETYENP 601
EDED V V+ T +P
Sbjct: 109 EDEDAVPVVNRTTTSP 124
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +2
Query: 407 EQFSKMMTDEEK-SKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVD 583
E M+ D EK ++ K + D A N+L L I +K DED ++++
Sbjct: 541 EDIEAMINDAEKFAEDDKKVKDKAEARNELESYAYNLKNQIEDKEKLGGKLDEDDKKTIE 600
Query: 584 ETYE 595
E E
Sbjct: 601 EAVE 604
>AL031632-2|CAA21005.2| 789|Caenorhabditis elegans Hypothetical
protein Y32B12B.2 protein.
Length = 789
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 482 ENQLPERCSGLVKD-IREKFGKDSNEDEDKVESVDETYEN 598
E++L +R GL D E G+D EDED+ E E E+
Sbjct: 710 EDELKDRKHGLFDDEASESDGEDEFEDEDEEEPEGEDLED 749
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,715,931
Number of Sequences: 27780
Number of extensions: 328332
Number of successful extensions: 990
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 989
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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