Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17b02
         (654 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    59   1e-10
AM182454-1|CAJ65692.1|  182|Anopheles gambiae globin 2 protein.        25   2.1  
AY505417-1|AAR90328.1|  206|Anopheles gambiae superoxide dismuta...    24   3.7  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 59.3 bits (137), Expect = 1e-10
 Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 8/145 (5%)
 Frame = +2

Query: 188 VPDTPNAADTSLLMKIIRQGLVESKLDIEIQ-RKDPNSPLYSVKTFEALHLKPNLLKGVY 364
           +P  P   ++ +    I  G+   K + EIQ R    +P   V++FE   L+  ++  V 
Sbjct: 132 IPPLPTEDESLIFGSGISSGINFDKFE-EIQVRVSGENPPDHVESFERSGLREEVMTNVR 190

Query: 365 AMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM----LSRVDS---NKN 523
              +  P+ IQ  A+P +L    ++++A +Q+G+GKTAAF+L M    L + DS      
Sbjct: 191 KSSYTKPTPIQRYAIPIILNG--RDLMACAQTGSGKTAAFMLPMIHHLLDKEDSLELRTR 248

Query: 524 YPQVLCLSPTYELAIQTGEVAAKMA 598
            P ++ ++PT ELAIQ  +   K A
Sbjct: 249 NPYIVIVAPTRELAIQIHDEGRKFA 273


>AM182454-1|CAJ65692.1|  182|Anopheles gambiae globin 2 protein.
          Length = 182

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = +2

Query: 77  INMASQWGQKAEELEISNKVAGLGLDKKHNQETDSDDVPDTPNA 208
           I + S WG   ++L++  +   L L  KH +     D  D PNA
Sbjct: 12  ITLFSAWGLIRKDLDVHGRNVLLLLFHKHPRYIAYFDFTDDPNA 55


>AY505417-1|AAR90328.1|  206|Anopheles gambiae superoxide dismutase
           1 protein.
          Length = 206

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = +3

Query: 102 KRQKSWRFQIKLQGWAWIKNIIKKQILMMYLIPLMQPI 215
           K  K+    ++  GWAW+    K ++L +   P   P+
Sbjct: 140 KEMKAAAVAVQGSGWAWLGYNKKTKLLQIAACPNQDPL 177


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 653,116
Number of Sequences: 2352
Number of extensions: 13018
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)