Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte17b02
(654 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 165 2e-41
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 165 2e-41
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 165 2e-41
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 87 1e-17
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 87 1e-17
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 79 3e-15
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 79 3e-15
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 65 4e-11
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 64 8e-11
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 64 8e-11
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 64 8e-11
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 63 2e-10
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 62 3e-10
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 62 3e-10
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 61 8e-10
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 61 8e-10
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 61 8e-10
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 61 8e-10
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 61 8e-10
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 56 2e-08
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 55 5e-08
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 54 7e-08
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 54 7e-08
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 54 7e-08
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 54 9e-08
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 54 9e-08
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 54 1e-07
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 53 2e-07
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 53 2e-07
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 50 1e-06
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 50 1e-06
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 49 3e-06
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 47 1e-05
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 45 5e-05
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 44 7e-05
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 42 4e-04
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 42 5e-04
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 42 5e-04
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 37 0.014
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 29 2.9
AL032625-4|CAB63350.2| 792|Caenorhabditis elegans Hypothetical ... 28 5.0
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 28 6.7
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 28 6.7
AL031621-3|CAA20935.2| 740|Caenorhabditis elegans Hypothetical ... 28 6.7
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 165 bits (401), Expect = 2e-41
Identities = 80/148 (54%), Positives = 105/148 (70%), Gaps = 1/148 (0%)
Frame = +2
Query: 200 PNAADTSLLMKIIRQGLVESK-LDIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGF 376
P AD +LL K I++ + K + +++QR+DP SPLYS+ +F L LKP +LK + M F
Sbjct: 170 PVPADIALLNKFIQKEVKMMKDVVVDVQRQDPKSPLYSISSFRELRLKPEVLKALDTMNF 229
Query: 377 NAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTY 556
P++IQETALP LL +PP N+IAQ+QSGTGKTAAFVL ML R+D N PQ +CL+PT
Sbjct: 230 QFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTL 289
Query: 557 ELAIQTGEVAAKMAKFCPEIKLKYAVRG 640
ELA Q GEV KM KF +K+ YA++G
Sbjct: 290 ELAKQIGEVVEKMGKFIDNLKIHYAIKG 317
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 165 bits (401), Expect = 2e-41
Identities = 80/148 (54%), Positives = 105/148 (70%), Gaps = 1/148 (0%)
Frame = +2
Query: 200 PNAADTSLLMKIIRQGLVESK-LDIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGF 376
P AD +LL K I++ + K + +++QR+DP SPLYS+ +F L LKP +LK + M F
Sbjct: 195 PVPADIALLNKFIQKEVKMMKDVVVDVQRQDPKSPLYSISSFRELRLKPEVLKALDTMNF 254
Query: 377 NAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTY 556
P++IQETALP LL +PP N+IAQ+QSGTGKTAAFVL ML R+D N PQ +CL+PT
Sbjct: 255 QFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTL 314
Query: 557 ELAIQTGEVAAKMAKFCPEIKLKYAVRG 640
ELA Q GEV KM KF +K+ YA++G
Sbjct: 315 ELAKQIGEVVEKMGKFIDNLKIHYAIKG 342
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 165 bits (401), Expect = 2e-41
Identities = 80/148 (54%), Positives = 105/148 (70%), Gaps = 1/148 (0%)
Frame = +2
Query: 200 PNAADTSLLMKIIRQGLVESK-LDIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGF 376
P AD +LL K I++ + K + +++QR+DP SPLYS+ +F L LKP +LK + M F
Sbjct: 579 PVPADIALLNKFIQKEVKMMKDVVVDVQRQDPKSPLYSISSFRELRLKPEVLKALDTMNF 638
Query: 377 NAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTY 556
P++IQETALP LL +PP N+IAQ+QSGTGKTAAFVL ML R+D N PQ +CL+PT
Sbjct: 639 QFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTL 698
Query: 557 ELAIQTGEVAAKMAKFCPEIKLKYAVRG 640
ELA Q GEV KM KF +K+ YA++G
Sbjct: 699 ELAKQIGEVVEKMGKFIDNLKIHYAIKG 726
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 87.0 bits (206), Expect = 1e-17
Identities = 42/98 (42%), Positives = 65/98 (66%)
Frame = +2
Query: 311 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 490
+ TF+ + L+ +LL+G+YA GF PS IQ+ A+P +L +++IAQ+QSGTGKTA F +
Sbjct: 25 IPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILK--ARDVIAQAQSGTGKTATFSI 82
Query: 491 AMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKF 604
++L +D+ Q L LSPT ELA+Q +V + +
Sbjct: 83 SVLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDY 120
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 86.6 bits (205), Expect = 1e-17
Identities = 42/98 (42%), Positives = 65/98 (66%)
Frame = +2
Query: 311 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 490
+ TF+ + L+ +LL+G+YA GF PS IQ+ A+P +L +++IAQ+QSGTGKTA F +
Sbjct: 25 IPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILK--ARDVIAQAQSGTGKTATFSI 82
Query: 491 AMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKF 604
++L +D+ Q L LSPT ELA+Q +V + +
Sbjct: 83 SVLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDY 120
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 79.0 bits (186), Expect = 3e-15
Identities = 39/98 (39%), Positives = 63/98 (64%)
Frame = +2
Query: 311 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 490
V++F+ + LK LL+G+Y GF PS IQ+ A+ +++IAQ+QSGTGKTA F +
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTG--KDVIAQAQSGTGKTATFSV 85
Query: 491 AMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKF 604
++L R+D + Q L ++PT ELA Q +V + + ++
Sbjct: 86 SILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEY 123
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 79.0 bits (186), Expect = 3e-15
Identities = 39/98 (39%), Positives = 63/98 (64%)
Frame = +2
Query: 311 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 490
V++F+ + LK LL+G+Y GF PS IQ+ A+ +++IAQ+QSGTGKTA F +
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTG--KDVIAQAQSGTGKTATFSV 85
Query: 491 AMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKF 604
++L R+D + Q L ++PT ELA Q +V + + ++
Sbjct: 86 SILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEY 123
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 65.3 bits (152), Expect = 4e-11
Identities = 33/110 (30%), Positives = 64/110 (58%)
Frame = +2
Query: 320 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 499
FE L +LL G++ G+ PS IQE ++ L Q+++A++++GTGKT A+ + ++
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTG--QDILARAKNGTGKTGAYCIPVI 102
Query: 500 SRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYAVRGEEL 649
++ Q + + PT ELA+QT ++ +++K ++K+ G +L
Sbjct: 103 EKIQPALKAIQAMVIVPTRELALQTSQICVELSKHI-QLKVMVTTGGTDL 151
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 64.1 bits (149), Expect = 8e-11
Identities = 31/101 (30%), Positives = 55/101 (54%)
Frame = +2
Query: 320 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 499
F LKP +L+ + GF PS++Q +P + +++ Q++SG GKTA FV+ L
Sbjct: 43 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILG--MDVVCQAKSGMGKTAVFVITTL 100
Query: 500 SRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKL 622
+++ V+C+ T ELA Q + + +K+ P +K+
Sbjct: 101 QQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKV 141
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 64.1 bits (149), Expect = 8e-11
Identities = 31/101 (30%), Positives = 55/101 (54%)
Frame = +2
Query: 320 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 499
F LKP +L+ + GF PS++Q +P + +++ Q++SG GKTA FV+ L
Sbjct: 43 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILG--MDVVCQAKSGMGKTAVFVITTL 100
Query: 500 SRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKL 622
+++ V+C+ T ELA Q + + +K+ P +K+
Sbjct: 101 QQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKV 141
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 64.1 bits (149), Expect = 8e-11
Identities = 31/101 (30%), Positives = 55/101 (54%)
Frame = +2
Query: 320 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 499
F LKP +L+ + GF PS++Q +P + +++ Q++SG GKTA FV+ L
Sbjct: 42 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILG--MDVVCQAKSGMGKTAVFVITTL 99
Query: 500 SRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKL 622
+++ V+C+ T ELA Q + + +K+ P +K+
Sbjct: 100 QQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKV 140
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 62.9 bits (146), Expect = 2e-10
Identities = 37/99 (37%), Positives = 58/99 (58%), Gaps = 3/99 (3%)
Frame = +2
Query: 317 TFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 496
+FE ++L +LK G++ P+ IQ+ +P L +++ A + +GTGKTAAFVL +
Sbjct: 149 SFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTG--KDICACAATGTGKTAAFVLPI 206
Query: 497 LSRV---DSNKNYPQVLCLSPTYELAIQTGEVAAKMAKF 604
L R+ + +VL L PT ELAIQ +V K++ F
Sbjct: 207 LERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLSTF 245
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 62.1 bits (144), Expect = 3e-10
Identities = 32/96 (33%), Positives = 59/96 (61%), Gaps = 1/96 (1%)
Frame = +2
Query: 320 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 499
++ + L ++ K + GFN P+ IQ +P ++ ++++A S++G+GKTAAFV+ ML
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDG--KDVVAMSRTGSGKTAAFVIPML 83
Query: 500 SRVDSNKNYP-QVLCLSPTYELAIQTGEVAAKMAKF 604
++ + L +SPT ELA+QT +V ++ +F
Sbjct: 84 QKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRF 119
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 62.1 bits (144), Expect = 3e-10
Identities = 32/96 (33%), Positives = 59/96 (61%), Gaps = 1/96 (1%)
Frame = +2
Query: 320 FEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 499
++ + L ++ K + GFN P+ IQ +P ++ ++++A S++G+GKTAAFV+ ML
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDG--KDVVAMSRTGSGKTAAFVIPML 83
Query: 500 SRVDSNKNYP-QVLCLSPTYELAIQTGEVAAKMAKF 604
++ + L +SPT ELA+QT +V ++ +F
Sbjct: 84 QKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRF 119
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 60.9 bits (141), Expect = 8e-10
Identities = 51/160 (31%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Frame = +2
Query: 188 VPDTPNAADTSLLMKIIRQGLVESKL---DIEIQRKDPNSPLYSVKTFEALHLKPNLLKG 358
VP N D + KI +GL+ +K ++++ + + KTF +L + K
Sbjct: 297 VPVEDNMEDVFNMQKI-SEGLMFNKFFDAEVKLTSSEKTVGIKPCKTFAEANLTETMQKN 355
Query: 359 VYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRV--DSNKN--- 523
V G++ + IQ+ ALP L +++A +Q+G+GKTAAF+L +++R+ D+N N
Sbjct: 356 VAHAGYSKTTPIQQYALP--LVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAG 413
Query: 524 ----YPQVLCLSPTYELAIQTGEVAAKMA-KFCPEIKLKY 628
YP+ + L+PT ELA Q K A + EIK Y
Sbjct: 414 EGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVY 453
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 60.9 bits (141), Expect = 8e-10
Identities = 51/160 (31%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Frame = +2
Query: 188 VPDTPNAADTSLLMKIIRQGLVESKL---DIEIQRKDPNSPLYSVKTFEALHLKPNLLKG 358
VP N D + KI +GL+ +K ++++ + + KTF +L + K
Sbjct: 297 VPVEDNMEDVFNMQKI-SEGLMFNKFFDAEVKLTSSEKTVGIKPCKTFAEANLTETMQKN 355
Query: 359 VYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRV--DSNKN--- 523
V G++ + IQ+ ALP L +++A +Q+G+GKTAAF+L +++R+ D+N N
Sbjct: 356 VAHAGYSKTTPIQQYALP--LVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAG 413
Query: 524 ----YPQVLCLSPTYELAIQTGEVAAKMA-KFCPEIKLKY 628
YP+ + L+PT ELA Q K A + EIK Y
Sbjct: 414 EGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVY 453
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 60.9 bits (141), Expect = 8e-10
Identities = 34/110 (30%), Positives = 62/110 (56%)
Frame = +2
Query: 269 IEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIA 448
IE+ + + + S TFE+L + L+ + F+ PS +Q A+P L ++M+
Sbjct: 7 IEVLDRGSSIDVQSNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLG--RDMLV 64
Query: 449 QSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMA 598
Q++SGTGKT F + + +DS ++ Q + ++PT E+++Q E K+A
Sbjct: 65 QAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVA 114
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 60.9 bits (141), Expect = 8e-10
Identities = 34/110 (30%), Positives = 62/110 (56%)
Frame = +2
Query: 269 IEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIA 448
IE+ + + + S TFE+L + L+ + F+ PS +Q A+P L ++M+
Sbjct: 7 IEVLDRGSSIDVQSNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLG--RDMLV 64
Query: 449 QSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMA 598
Q++SGTGKT F + + +DS ++ Q + ++PT E+++Q E K+A
Sbjct: 65 QAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVA 114
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 60.9 bits (141), Expect = 8e-10
Identities = 51/160 (31%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Frame = +2
Query: 188 VPDTPNAADTSLLMKIIRQGLVESKL---DIEIQRKDPNSPLYSVKTFEALHLKPNLLKG 358
VP N D + KI +GL+ +K ++++ + + KTF +L + K
Sbjct: 297 VPVEDNMEDVFNMQKI-SEGLMFNKFFDAEVKLTSSEKTVGIKPCKTFAEANLTETMQKN 355
Query: 359 VYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRV--DSNKN--- 523
V G++ + IQ+ ALP L +++A +Q+G+GKTAAF+L +++R+ D+N N
Sbjct: 356 VAHAGYSKTTPIQQYALP--LVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAG 413
Query: 524 ----YPQVLCLSPTYELAIQTGEVAAKMA-KFCPEIKLKY 628
YP+ + L+PT ELA Q K A + EIK Y
Sbjct: 414 EGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVY 453
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 56.4 bits (130), Expect = 2e-08
Identities = 47/170 (27%), Positives = 84/170 (49%), Gaps = 16/170 (9%)
Frame = +2
Query: 137 AGLGLDKKHNQETDSDDVPDTPNAADTSLLMKIIRQGLVESKLD-IEIQRKDPNSPLYSV 313
+G G + K +S+ P S L G+ K + I ++ + P ++
Sbjct: 64 SGNGFNNKRYSGAESNQWGGAPAEYSESNLFHRTDSGINFDKYENIPVEVSGDSVPA-AI 122
Query: 314 KTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLA 493
+ F P +++ V G++ P+ +Q+ ++PTLLA+ +++++ +Q+G+GKTAAF+L
Sbjct: 123 EHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLAN--RDLMSCAQTGSGKTAAFLLP 180
Query: 494 MLSRV-----DSNK----------NYPQVLCLSPTYELAIQTGEVAAKMA 598
++ + D K YP L LSPT ELAIQ + A K +
Sbjct: 181 IIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFS 230
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 54.8 bits (126), Expect = 5e-08
Identities = 36/114 (31%), Positives = 59/114 (51%)
Frame = +2
Query: 239 RQGLVESKLDIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTL 418
++ L + K+ E KD + K+F L + L +G+ PSKIQ+ ALP
Sbjct: 20 KKNLTKKKVVTEEIEKDDEEDVKE-KSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHA 78
Query: 419 LADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGE 580
L +++I +++G+GKT AF + +L + + L L+PT ELA Q G+
Sbjct: 79 LQG--KDVIGLAETGSGKTGAFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIGQ 130
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 54.4 bits (125), Expect = 7e-08
Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 12/136 (8%)
Frame = +2
Query: 227 MKIIRQGLVESKL-DIEIQRKDPNSPL--YSVKTFEALHLKPNLLKGVYAMGFNAPSKIQ 397
M+ I +GL+ +K D E++ P+ + KTF +L + K V G+ + IQ
Sbjct: 520 MQKISEGLMFNKFFDAEVKITSDKKPVGVKTCKTFSEANLGETMKKNVAHAGYTKTTPIQ 579
Query: 398 ETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSR-VDSNK--------NYPQVLCLSP 550
+ LP L +++A +Q+G+GKTAAF+L +++R +D N YP+ + L+P
Sbjct: 580 QYTLP--LIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTP 637
Query: 551 TYELAIQTGEVAAKMA 598
T EL Q K A
Sbjct: 638 TRELTDQIYNEGRKFA 653
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 54.4 bits (125), Expect = 7e-08
Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 12/136 (8%)
Frame = +2
Query: 227 MKIIRQGLVESKL-DIEIQRKDPNSPL--YSVKTFEALHLKPNLLKGVYAMGFNAPSKIQ 397
M+ I +GL+ +K D E++ P+ + KTF +L + K V G+ + IQ
Sbjct: 520 MQKISEGLMFNKFFDAEVKITSDKKPVGVKTCKTFSEANLGETMKKNVAHAGYTKTTPIQ 579
Query: 398 ETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSR-VDSNK--------NYPQVLCLSP 550
+ LP L +++A +Q+G+GKTAAF+L +++R +D N YP+ + L+P
Sbjct: 580 QYTLP--LIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTP 637
Query: 551 TYELAIQTGEVAAKMA 598
T EL Q K A
Sbjct: 638 TRELTDQIYNEGRKFA 653
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 54.4 bits (125), Expect = 7e-08
Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 12/136 (8%)
Frame = +2
Query: 227 MKIIRQGLVESKL-DIEIQRKDPNSPL--YSVKTFEALHLKPNLLKGVYAMGFNAPSKIQ 397
M+ I +GL+ +K D E++ P+ + KTF +L + K V G+ + IQ
Sbjct: 520 MQKISEGLMFNKFFDAEVKITSDKKPVGVKTCKTFSEANLGETMKKNVAHAGYTKTTPIQ 579
Query: 398 ETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSR-VDSNK--------NYPQVLCLSP 550
+ LP L +++A +Q+G+GKTAAF+L +++R +D N YP+ + L+P
Sbjct: 580 QYTLP--LIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTP 637
Query: 551 TYELAIQTGEVAAKMA 598
T EL Q K A
Sbjct: 638 TRELTDQIYNEGRKFA 653
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 54.0 bits (124), Expect = 9e-08
Identities = 36/112 (32%), Positives = 64/112 (57%), Gaps = 15/112 (13%)
Frame = +2
Query: 308 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFV 487
+++ F P +++ V G++ P+ +Q+ ++PTLLA+ +++++ +Q+G+GKTAAF+
Sbjct: 137 AIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLAN--RDLMSCAQTGSGKTAAFL 194
Query: 488 LAMLSRV-----DSNK----------NYPQVLCLSPTYELAIQTGEVAAKMA 598
L ++ + D K YP L LSPT ELAIQ + A K +
Sbjct: 195 LPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFS 246
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 54.0 bits (124), Expect = 9e-08
Identities = 36/112 (32%), Positives = 64/112 (57%), Gaps = 15/112 (13%)
Frame = +2
Query: 308 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFV 487
+++ F P +++ V G++ P+ +Q+ ++PTLLA+ +++++ +Q+G+GKTAAF+
Sbjct: 118 AIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLAN--RDLMSCAQTGSGKTAAFL 175
Query: 488 LAMLSRV-----DSNK----------NYPQVLCLSPTYELAIQTGEVAAKMA 598
L ++ + D K YP L LSPT ELAIQ + A K +
Sbjct: 176 LPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFS 227
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 53.6 bits (123), Expect = 1e-07
Identities = 28/84 (33%), Positives = 48/84 (57%)
Frame = +2
Query: 329 LHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRV 508
+ LK LL+G+Y GF PS IQ++A+ +++ QSQ+G+GKT ++ +L +
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTG--KDVTIQSQAGSGKTVISLIDILQGI 58
Query: 509 DSNKNYPQVLCLSPTYELAIQTGE 580
D + QV+ L+P +A + E
Sbjct: 59 DCEDAHLQVILLAPQRGMAQRAHE 82
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 52.8 bits (121), Expect = 2e-07
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 11/139 (7%)
Frame = +2
Query: 188 VPDTPNAADTSLLMKIIRQGLVESKLDIEIQRKDPNSP--LYSVKTFEALHLKPNLLKGV 361
VP + ++KI + D +Q P + K+F + ++ + V
Sbjct: 254 VPVVDKMEEVFSMLKINAGDFFDKFFDASVQLVSRGQPVTIQPCKSFSDSDIPQSMRRNV 313
Query: 362 YAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKN------ 523
G+ + IQ+ LP L+AD ++++A +Q+G+GKTAAF+L ++SR+ K+
Sbjct: 314 ERAGYTRTTPIQQYTLP-LVADG-KDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAE 371
Query: 524 ---YPQVLCLSPTYELAIQ 571
YP+ + L+PT ELA Q
Sbjct: 372 GGCYPRCIILTPTRELADQ 390
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 52.8 bits (121), Expect = 2e-07
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 11/139 (7%)
Frame = +2
Query: 188 VPDTPNAADTSLLMKIIRQGLVESKLDIEIQRKDPNSP--LYSVKTFEALHLKPNLLKGV 361
VP + ++KI + D +Q P + K+F + ++ + V
Sbjct: 254 VPVVDKMEEVFSMLKINAGDFFDKFFDASVQLVSRGQPVTIQPCKSFSDSDIPQSMRRNV 313
Query: 362 YAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKN------ 523
G+ + IQ+ LP L+AD ++++A +Q+G+GKTAAF+L ++SR+ K+
Sbjct: 314 ERAGYTRTTPIQQYTLP-LVADG-KDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAE 371
Query: 524 ---YPQVLCLSPTYELAIQ 571
YP+ + L+PT ELA Q
Sbjct: 372 GGCYPRCIILTPTRELADQ 390
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 50.4 bits (115), Expect = 1e-06
Identities = 38/120 (31%), Positives = 66/120 (55%), Gaps = 6/120 (5%)
Frame = +2
Query: 254 ESKLDIEIQRKDPNSPLYSVKTFEALHLK--PNLLKGVYAMGFNAPSKIQETALPTLLAD 427
E K E + S + TF +L K NLLK V +GF ++IQ ++ LL
Sbjct: 46 EQKHQTEESSETKVSEFLTKTTFASLEGKVNANLLKAVQGLGFTTMTEIQAKSIDPLLEG 105
Query: 428 PPQNMIAQSQSGTGKTAAFVL---AMLSRVD-SNKNYPQVLCLSPTYELAIQTGEVAAKM 595
++++A +++G+GKT AF+L +L +++ N V+ +SPT EL++QT V +++
Sbjct: 106 --KDVLASAKTGSGKTLAFLLPAIELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVLSEL 163
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 50.4 bits (115), Expect = 1e-06
Identities = 34/130 (26%), Positives = 72/130 (55%), Gaps = 6/130 (4%)
Frame = +2
Query: 239 RQGLVESKLDIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTL 418
RQ L+ES + ++ D P + KTF L +LK + +G+ +++QE+ +
Sbjct: 67 RQKLMESLVGPQVDEMD-FEPEH--KTFADFGLDERILKSIGELGWEKANQVQESVISLA 123
Query: 419 LADPPQNMIAQSQSGTGKTAAFVLAMLSRV--DSNKN----YPQVLCLSPTYELAIQTGE 580
L + +N++ ++++G+GKT AF++ ++ ++ +S N P + ++PT EL Q +
Sbjct: 124 LEN--KNIMGRARTGSGKTGAFLIPLVQKLIAESKTNDGSVGPSAVIIAPTKELITQIYK 181
Query: 581 VAAKMAKFCP 610
+ K+++ P
Sbjct: 182 LFVKLSQALP 191
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 48.8 bits (111), Expect = 3e-06
Identities = 41/104 (39%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Frame = +2
Query: 311 VKTFE-ALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFV 487
V +FE A +++ + GF PS IQ P LL+ Q+ I SQ+G+GKT AF+
Sbjct: 82 VNSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSG--QDCIGVSQTGSGKTLAFL 139
Query: 488 LAMLSRVDS-----------NKNYPQVLCLSPTYELAIQ-TGEV 583
L L +D+ K P VL LSPT ELA Q GEV
Sbjct: 140 LPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEV 183
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 47.2 bits (107), Expect = 1e-05
Identities = 29/102 (28%), Positives = 56/102 (54%), Gaps = 5/102 (4%)
Frame = +2
Query: 311 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 490
+KT+ + ++ + ++ P+ IQ A+P++++ +++I +++G+GKT AF+L
Sbjct: 303 IKTWAQCGVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSG--RDVIGIAKTGSGKTLAFLL 360
Query: 491 AMLSRVDSNKNY-----PQVLCLSPTYELAIQTGEVAAKMAK 601
M + P + L+PT ELA+QT + A K AK
Sbjct: 361 PMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKFAK 402
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 44.8 bits (101), Expect = 5e-05
Identities = 42/151 (27%), Positives = 70/151 (46%), Gaps = 10/151 (6%)
Frame = +2
Query: 152 DKKHNQETDSDDVPDTPNAADTSLLMKIIRQ---GLVESKLDIEIQRKDPNSPLYSVKTF 322
+ K + D + P A L+K +Q G E+ LD E+++K S +TF
Sbjct: 17 NNKRKRNFDGEQDPSVRKALKEKRLLKKRKQDLKGQEETMLD-EVEQKYQEMLKKSSRTF 75
Query: 323 ---EALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLA 493
E L L+G+ + P++IQ + L +++ +++G+GKT A V+
Sbjct: 76 LRFEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTG--SDVVGAAKTGSGKTLALVIP 133
Query: 494 MLSRVDSNKNYPQ----VLCLSPTYELAIQT 574
+L + K P L +SPT ELA+QT
Sbjct: 134 VLEALWRAKWSPDYGLGALIISPTRELALQT 164
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 44.4 bits (100), Expect = 7e-05
Identities = 30/116 (25%), Positives = 58/116 (50%), Gaps = 16/116 (13%)
Frame = +2
Query: 311 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 490
+ F L L + + + G++ P+ +Q+ ++P L +++++ +Q+G+GKTAAF++
Sbjct: 165 ISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGG--RDLMSCAQTGSGKTAAFLV 222
Query: 491 AMLSRV----------------DSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCP 610
+++ + K YP L LSPT EL++Q + K A P
Sbjct: 223 PLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNESRKFAYRTP 278
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 41.9 bits (94), Expect = 4e-04
Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 9/106 (8%)
Frame = +2
Query: 311 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 490
++ +E + + V +G+ P+ IQ A+P L + +++I +++G+GKTAAF+L
Sbjct: 300 LRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQN--RDVIGVAETGSGKTAAFLL 357
Query: 491 AML---------SRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAK 601
+L R + P + ++PT ELA Q E K K
Sbjct: 358 PLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGK 403
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 41.5 bits (93), Expect = 5e-04
Identities = 25/98 (25%), Positives = 47/98 (47%)
Frame = +2
Query: 308 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFV 487
+ K F L + + + + M + +Q +P +L +++ +++GTGKT AF
Sbjct: 87 TTKKFSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEG--SDILGCARTGTGKTLAFA 144
Query: 488 LAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAK 601
+ +L ++ + L L+PT ELA Q E + K
Sbjct: 145 IPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGK 182
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 41.5 bits (93), Expect = 5e-04
Identities = 25/98 (25%), Positives = 47/98 (47%)
Frame = +2
Query: 308 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFV 487
+ K F L + + + + M + +Q +P +L +++ +++GTGKT AF
Sbjct: 87 TTKKFSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEG--SDILGCARTGTGKTLAFA 144
Query: 488 LAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAK 601
+ +L ++ + L L+PT ELA Q E + K
Sbjct: 145 IPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGK 182
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 38.3 bits (85), Expect = 0.005
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Frame = +2
Query: 308 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFV 487
++KTF L P LL+ V+ + + + +Q + LL +++ +S +G+GKT AFV
Sbjct: 9 ALKTFRE-KLGPELLE-VFDKSYKSFTDVQVLSGTHLLN--LSDVVVESPTGSGKTLAFV 64
Query: 488 LAMLSRVDSNKNYPQ---VLCLSPTYELAIQTGEVAAKMAK 601
L M+ + + K P L LSP+ EL Q V A+
Sbjct: 65 LPMMRMIQNAKLQPADIGALILSPSRELCSQIVSVIQPFAE 105
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 36.7 bits (81), Expect = 0.014
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 10/92 (10%)
Frame = +2
Query: 335 LKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRV-- 508
L P +L+ + + +N IQ +P +L +++ Q+++ GKTAAF L ++ ++
Sbjct: 388 LHPTILETLKRIKYNNVRTIQGAMIPQVLDG--HDVLGQAETSAGKTAAFGLPIIDKILR 445
Query: 509 --DSNKNY------PQVLCLSPTYELAIQTGE 580
+ +N P L L+PT ELA Q E
Sbjct: 446 MDEETRNKARQDDGPLALILAPTRELAAQIHE 477
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +2
Query: 371 GFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 499
G P+ IQ +P L+ ++MI + +G+GKT FVL ++
Sbjct: 209 GIVTPTAIQIQGIPVALSG--RDMIGIASTGSGKTMTFVLPLV 249
>AL032625-4|CAB63350.2| 792|Caenorhabditis elegans Hypothetical
protein Y37H9A.3 protein.
Length = 792
Score = 28.3 bits (60), Expect = 5.0
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2
Query: 200 GYQVHHQNLFLDYVF 156
GY+ HH NLF+ Y F
Sbjct: 650 GYETHHANLFIKYTF 664
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 245 GLVESKLDIEIQRKDPNSPLYSVKTFEALHLKPN 346
G VES D+E R+D L S ++ +H P+
Sbjct: 1920 GNVESAYDVETDRRDSERSLKSERSIPEIHTSPS 1953
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 245 GLVESKLDIEIQRKDPNSPLYSVKTFEALHLKPN 346
G VES D+E R+D L S ++ +H P+
Sbjct: 1920 GNVESAYDVETDRRDSERSLKSERSIPEIHTSPS 1953
>AL031621-3|CAA20935.2| 740|Caenorhabditis elegans Hypothetical
protein F28H6.6 protein.
Length = 740
Score = 27.9 bits (59), Expect = 6.7
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +2
Query: 218 SLLMKIIRQGLVESKLDIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQ 397
SL+ +IRQ ++++I KD +P KTF AL K + +A F +KI
Sbjct: 355 SLIKAMIRQTRETLDIELQIMLKDSINPKSHAKTFAALLKKERETRTKHAKVF-MEAKIN 413
Query: 398 E 400
E
Sbjct: 414 E 414
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,358,681
Number of Sequences: 27780
Number of extensions: 287789
Number of successful extensions: 817
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 785
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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