BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte17a23
(661 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY094790-1|AAM11143.1| 184|Drosophila melanogaster LD17235p pro... 344 7e-95
AE013599-2887|AAF57560.1| 184|Drosophila melanogaster CG7726-PA... 344 7e-95
U15643-1|AAC46585.1| 184|Drosophila melanogaster ribosomal prot... 334 5e-92
BT022593-1|AAY55009.1| 163|Drosophila melanogaster IP06777p pro... 248 5e-66
AY069775-1|AAL39920.1| 2171|Drosophila melanogaster SD01562p pro... 29 4.2
AE013599-2783|AAF57626.1| 2599|Drosophila melanogaster CG15099-P... 29 4.2
AY525767-1|AAS48649.1| 1538|Drosophila melanogaster ADAM metallo... 29 5.6
AE014297-4423|AAF56926.1| 1537|Drosophila melanogaster CG1964-PA... 29 5.6
BT024303-1|ABC86365.1| 142|Drosophila melanogaster IP12083p pro... 28 9.8
AE014297-3651|AAN14023.1| 542|Drosophila melanogaster CG31105-P... 28 9.8
>AY094790-1|AAM11143.1| 184|Drosophila melanogaster LD17235p
protein.
Length = 184
Score = 344 bits (845), Expect = 7e-95
Identities = 160/173 (92%), Positives = 168/173 (97%)
Frame = +2
Query: 122 DNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 301
D +KN MR+LHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN
Sbjct: 11 DPAKNPMRDLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 70
Query: 302 EKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGI 481
EKIAVHCTVRGAKAEEILERGLKVREYELRR+NFS+TGNFGFGIQEHIDLGIKYDPSIGI
Sbjct: 71 EKIAVHCTVRGAKAEEILERGLKVREYELRRENFSSTGNFGFGIQEHIDLGIKYDPSIGI 130
Query: 482 YGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDGIILNSK 640
YGLDFYVVLGRPG+NV HR+RK+G VGF HRLTKEDAMKWFQQKYDGIILN+K
Sbjct: 131 YGLDFYVVLGRPGYNVNHRKRKSGTVGFQHRLTKEDAMKWFQQKYDGIILNTK 183
>AE013599-2887|AAF57560.1| 184|Drosophila melanogaster CG7726-PA
protein.
Length = 184
Score = 344 bits (845), Expect = 7e-95
Identities = 160/173 (92%), Positives = 168/173 (97%)
Frame = +2
Query: 122 DNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 301
D +KN MR+LHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN
Sbjct: 11 DPAKNPMRDLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 70
Query: 302 EKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGI 481
EKIAVHCTVRGAKAEEILERGLKVREYELRR+NFS+TGNFGFGIQEHIDLGIKYDPSIGI
Sbjct: 71 EKIAVHCTVRGAKAEEILERGLKVREYELRRENFSSTGNFGFGIQEHIDLGIKYDPSIGI 130
Query: 482 YGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDGIILNSK 640
YGLDFYVVLGRPG+NV HR+RK+G VGF HRLTKEDAMKWFQQKYDGIILN+K
Sbjct: 131 YGLDFYVVLGRPGYNVNHRKRKSGTVGFQHRLTKEDAMKWFQQKYDGIILNTK 183
>U15643-1|AAC46585.1| 184|Drosophila melanogaster ribosomal protein
DL11 protein.
Length = 184
Score = 334 bits (822), Expect = 5e-92
Identities = 156/173 (90%), Positives = 165/173 (95%)
Frame = +2
Query: 122 DNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 301
D ++ +LHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN
Sbjct: 11 DPAQEPDEDLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 70
Query: 302 EKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGI 481
EKIAVHCTVRGAKAEEILERGLKVREYELRR+NFS+TGNFGFGIQEHIDLGIKYDPSIGI
Sbjct: 71 EKIAVHCTVRGAKAEEILERGLKVREYELRRENFSSTGNFGFGIQEHIDLGIKYDPSIGI 130
Query: 482 YGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDGIILNSK 640
YGLDFYVVLGRPG+NV HR+RK+G VGF HRLTKEDAMKWFQQKYDGIILN+K
Sbjct: 131 YGLDFYVVLGRPGYNVNHRKRKSGTVGFQHRLTKEDAMKWFQQKYDGIILNTK 183
>BT022593-1|AAY55009.1| 163|Drosophila melanogaster IP06777p
protein.
Length = 163
Score = 248 bits (607), Expect = 5e-66
Identities = 114/125 (91%), Positives = 120/125 (96%)
Frame = +2
Query: 266 RYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHI 445
R VRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRR+NFS+TGNFGFGIQEHI
Sbjct: 38 RRCVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRENFSSTGNFGFGIQEHI 97
Query: 446 DLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDGI 625
DLGIKYDPSIGIYGLDFYVVLGRPG+NV HR+RK+G VGF HRLTKEDAMKWFQQKYDGI
Sbjct: 98 DLGIKYDPSIGIYGLDFYVVLGRPGYNVNHRKRKSGTVGFQHRLTKEDAMKWFQQKYDGI 157
Query: 626 ILNSK 640
ILN+K
Sbjct: 158 ILNTK 162
>AY069775-1|AAL39920.1| 2171|Drosophila melanogaster SD01562p
protein.
Length = 2171
Score = 29.5 bits (63), Expect = 4.2
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 235 ELLQHLGGTSQPVTGFTNTYVQAKLSDMKIPHY 137
ELL HLG Q GF T ++ L + +PHY
Sbjct: 626 ELLWHLGRDKQTARGFEKTLLKV-LDTLALPHY 657
>AE013599-2783|AAF57626.1| 2599|Drosophila melanogaster CG15099-PA
protein.
Length = 2599
Score = 29.5 bits (63), Expect = 4.2
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 235 ELLQHLGGTSQPVTGFTNTYVQAKLSDMKIPHY 137
ELL HLG Q GF T ++ L + +PHY
Sbjct: 1054 ELLWHLGRDKQTARGFEKTLLKV-LDTLALPHY 1085
>AY525767-1|AAS48649.1| 1538|Drosophila melanogaster ADAM
metalloprotease CG1964 protein.
Length = 1538
Score = 29.1 bits (62), Expect = 5.6
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = -1
Query: 355 KDFFCFSSSDCTMDSNLFITTDTKRPHCIPSLGKYRLLSCELLQHLGGTSQP 200
K+F C+ DCT ++ + + CIP R+ SCEL L G P
Sbjct: 813 KEFVCYMG-DCT--GSICLAYGLESCQCIPGPQDDRIKSCELCCKLPGEDSP 861
>AE014297-4423|AAF56926.1| 1537|Drosophila melanogaster CG1964-PA
protein.
Length = 1537
Score = 29.1 bits (62), Expect = 5.6
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = -1
Query: 355 KDFFCFSSSDCTMDSNLFITTDTKRPHCIPSLGKYRLLSCELLQHLGGTSQP 200
K+F C+ DCT ++ + + CIP R+ SCEL L G P
Sbjct: 813 KEFVCYMG-DCT--GSICLAYGLESCQCIPGPQDDRIKSCELCCKLPGEDSP 861
>BT024303-1|ABC86365.1| 142|Drosophila melanogaster IP12083p
protein.
Length = 142
Score = 28.3 bits (60), Expect = 9.8
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -2
Query: 657 LIFYFALLLSMIPSY-FCWNHFIASSFVRRWGNPTFPV 547
L+ + A +S+I W F+A SFV +P FPV
Sbjct: 77 LLVHMATTVSLIVVLSLTWEQFVAQSFVTNLKDPLFPV 114
>AE014297-3651|AAN14023.1| 542|Drosophila melanogaster CG31105-PA
protein.
Length = 542
Score = 28.3 bits (60), Expect = 9.8
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -2
Query: 657 LIFYFALLLSMIPSY-FCWNHFIASSFVRRWGNPTFPV 547
L+ + A +S+I W F+A SFV +P FPV
Sbjct: 70 LLVHMATTVSLIVVLSLTWEQFVAQSFVTNLKDPLFPV 107
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,903,551
Number of Sequences: 53049
Number of extensions: 638978
Number of successful extensions: 1601
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1601
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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