Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte17a17
(676 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0878 + 25606788-25606926,25607205-25607279,25607362-256074... 66 3e-11
03_06_0526 - 34515218-34515372,34515454-34515567,34515651-345157... 46 2e-05
04_04_1360 + 32889597-32890343 43 2e-04
07_03_1453 - 26649922-26650064,26650148-26650244,26651260-266514... 41 0.001
06_01_0007 + 130582-131544,132187-132264,132615-132732,133228-13... 38 0.006
03_01_0302 - 2361948-2362649,2363422-2363617,2363873-2363997,236... 38 0.006
02_01_0151 + 1067067-1067222,1067586-1067690,1067904-1067990,106... 33 0.21
12_02_0809 + 23351784-23352035,23352219-23352386,23353160-233532... 31 0.84
02_04_0510 + 23558111-23559613 31 1.1
02_03_0120 + 15463163-15465250 30 1.5
09_02_0561 + 10681056-10682285,10682546-10682764 29 2.6
07_03_0955 + 22867448-22868248 29 2.6
12_02_1097 - 26059963-26061093 29 3.4
02_01_0417 - 3048519-3048710,3048903-3050600,3050622-3050909,305... 29 3.4
04_04_1595 + 34678134-34678223,34678309-34678511,34679924-34680227 29 4.5
06_03_0957 + 26307062-26308987 28 5.9
06_03_0126 + 16978566-16979104,16979279-16979365,16979481-169795... 28 5.9
09_06_0308 - 22199389-22199451,22199604-22199924,22200178-222004... 28 7.8
06_01_0602 - 4342333-4342790,4342899-4345623 28 7.8
05_04_0167 + 18668004-18668287,18668961-18669043,18669346-186694... 28 7.8
>06_03_0878 +
25606788-25606926,25607205-25607279,25607362-25607426,
25607504-25607606,25607712-25607762,25608271-25608424,
25608781-25608925,25609039-25609144,25609267-25609415
Length = 328
Score = 65.7 bits (153), Expect = 3e-11
Identities = 43/132 (32%), Positives = 66/132 (50%), Gaps = 10/132 (7%)
Frame = +2
Query: 74 ISEFPFLL-PITGQ--TAKFDEDGDLDAVRPKRK------VIRIEHSPKTAISLVGRQVW 226
+S F F P+ G DEDGDL R +R V+ ++H +++ VG QVW
Sbjct: 36 VSRFSFSSRPLGGSPDAVTVDEDGDLVLDRRRRNRGRSDHVLTVQHGITSSLRSVGLQVW 95
Query: 227 RGAFLLGDWLIHLGL-KGELSNKNVLELGAGTGVTSIVAALFAEKVVCTDINVGGILDLI 403
+ A LL D+++H E + +E+GAGTG+ + A A+K+ TD ILD
Sbjct: 96 KAALLLTDFVLHKSFTSSEFNGVTAIEIGAGTGLVGLALARVAKKIFITD-RGSDILDNC 154
Query: 404 NLNAKYNKDLIK 439
N + N ++K
Sbjct: 155 LANVQLNSSMLK 166
>03_06_0526 -
34515218-34515372,34515454-34515567,34515651-34515722,
34515832-34515974,34516457-34516635,34517798-34517874,
34517994-34518150
Length = 298
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +2
Query: 206 LVGRQVWRGAFLLGDWLIHLGLKGELSNKNVLELGAGTGVTSI-VAALFAEKVVCTDINV 382
L +W G FL DWL+ K L + +LELG+GTG +I + F + TD +
Sbjct: 105 LNANMLWPGTFLFADWLVK--NKSILHGRRILELGSGTGALAIFLRKAFQVDITTTDYDD 162
Query: 383 GGILDLINLNAKYN 424
G I + I N K N
Sbjct: 163 GEIQENIAYNCKAN 176
>04_04_1360 + 32889597-32890343
Length = 248
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/67 (38%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +2
Query: 182 HSPKTAISLVGRQVWRGAFLLGDWLIHLGLKGELSNKNVLELGAGTGVTSI--VAALFAE 355
H P T +L G +W + +L L L VLELGAGTG+ I VA L A
Sbjct: 34 HDPATGRALTGSWLWDSSLVLASHLASCVHHHHLRGATVLELGAGTGLPGIAAVACLGAA 93
Query: 356 KVVCTDI 376
+ V TD+
Sbjct: 94 RCVLTDV 100
>07_03_1453 -
26649922-26650064,26650148-26650244,26651260-26651418,
26651478-26651603
Length = 174
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/75 (30%), Positives = 39/75 (52%)
Frame = +2
Query: 155 PKRKVIRIEHSPKTAISLVGRQVWRGAFLLGDWLIHLGLKGELSNKNVLELGAGTGVTSI 334
P R + +P + L VW GA L+ +L + + +++ELG+G G+T I
Sbjct: 75 PPRCFQLVPPAPTRSFLLSVELVWPGAVLMNTYLSEH--PETVKDHSIIELGSGVGITGI 132
Query: 335 VAALFAEKVVCTDIN 379
+ + F ++VV TD N
Sbjct: 133 LCSRFCKEVVLTDHN 147
>06_01_0007 + 130582-131544,132187-132264,132615-132732,133228-133271,
133389-133448,133536-133588,133671-133837,133963-134167,
134989-135046,135225-135281,135363-135608,135938-136002,
136090-136158,136238-136331,136467-136607,137159-137304,
137452-138110,138222-138335,138406-138560
Length = 1163
Score = 38.3 bits (85), Expect = 0.006
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +2
Query: 140 LDAVRPKRKVIRIEHSPKTAISLVGRQVWRGAFLLGDWLIHLGLKGELSNK--NVLELGA 313
LDA + +++ S T + G VW +L +L H G L+ + LELGA
Sbjct: 950 LDACGRRLSLLQSPSSMSTP-GVTGAVVWDSGVVLAKFLEHAVDSGLLTLRAARALELGA 1008
Query: 314 GTGVTSIVAALFAEKVVCTDI 376
G G+ VAAL V+ TD+
Sbjct: 1009 GCGLAGCVAALLGAHVLLTDL 1029
>03_01_0302 -
2361948-2362649,2363422-2363617,2363873-2363997,
2364118-2364180,2364445-2364495,2364597-2364668,
2364779-2364886,2365031-2365135,2365505-2365555,
2365971-2365995,2366234-2366258,2366352-2366439
Length = 536
Score = 38.3 bits (85), Expect = 0.006
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Frame = +2
Query: 164 KVIRIEHSPKTAISLVGRQVWRGAFLLGDWLIHLGLKGELSNKNVLELGAGT-GVTSIVA 340
K++ EH + L G +W A + L L+ K VLELG G+ G+ S+VA
Sbjct: 319 KMLTKEH--QHTCKLTGLMLWESAQFMCSVLAEN--PSILAGKRVLELGCGSAGICSMVA 374
Query: 341 ALFAEKVVCTDINVGGILDLINLNAKYN--KDLIK 439
A A+ VV TD + LDL+ N N DL+K
Sbjct: 375 ATVAQFVVATDGDAES-LDLLRENTASNLEPDLLK 408
>02_01_0151 +
1067067-1067222,1067586-1067690,1067904-1067990,
1068071-1068121,1068265-1068291,1068292-1068385,
1068610-1068845
Length = 251
Score = 33.1 bits (72), Expect = 0.21
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 8/80 (10%)
Frame = +2
Query: 212 GRQVWRGAFLLGDWLIHLGLKGELSNKNVLELGAGTGVTSIVAALFAEKVVCTDI----- 376
G VW + +L +++ + + V+ELGAGT + +VAA V TDI
Sbjct: 59 GMFVWPCSVILAEYVWQQ--RSRFTASTVVELGAGTSLPGLVAAKVGADVTLTDIAHNTE 116
Query: 377 ---NVGGILDLINLNAKYNK 427
N+ + L N+N NK
Sbjct: 117 VLNNIRQVCGLNNVNCTLNK 136
>12_02_0809 +
23351784-23352035,23352219-23352386,23353160-23353230,
23353444-23353501,23354117-23354296,23354919-23355003,
23355091-23355150,23355410-23355483,23355582-23355698
Length = 354
Score = 31.1 bits (67), Expect = 0.84
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -2
Query: 363 TTFSANRAATILVTPVPAPNSRTFLLESSPFKPRCI 256
T A AA + TP PAP+ R L +P RC+
Sbjct: 9 TATIAAAAAKLAATPAPAPSRRRLTLRGNPTARRCV 44
>02_04_0510 + 23558111-23559613
Length = 500
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/70 (25%), Positives = 34/70 (48%)
Frame = +2
Query: 92 LLPITGQTAKFDEDGDLDAVRPKRKVIRIEHSPKTAISLVGRQVWRGAFLLGDWLIHLGL 271
++ + G+ + D+ +L + R ++ +E K+ L G + W+ LL D L +GL
Sbjct: 122 MVDLLGKMRQIDQMWELLSDMHGRGLVTVETVAKSIRRLAGARRWKDVVLLFDKLEDMGL 181
Query: 272 KGELSNKNVL 301
+ NVL
Sbjct: 182 ERNTETMNVL 191
>02_03_0120 + 15463163-15465250
Length = 695
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +1
Query: 202 IFSGPTSMERSISIRRLVNTPWLKRRALQ*ECSRIRSRYRSDEYRR 339
+ +G ER IS+ V T W +RR + R++ R+ +DE RR
Sbjct: 583 VATGRRPAERGISVVNWVWTLWGRRRLVDAADRRLQGRFVADEMRR 628
>09_02_0561 + 10681056-10682285,10682546-10682764
Length = 482
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +2
Query: 224 WRGAFLLGDWLIHLGLKGELSNKNVLELGAGT-GVTSIVAALFAEKVVCTDI 376
WRG G+W++ L+ E S + AG G +VAA A VV +
Sbjct: 338 WRGQHSNGEWVLQKSLRLEESTMGLAGYKAGRGGAAMVVAAATAGSVVLAPV 389
>07_03_0955 + 22867448-22868248
Length = 266
Score = 29.5 bits (63), Expect = 2.6
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Frame = +2
Query: 296 VLELGAGTGVTSI-VAALFAEKVVCTDINVGGILDLINLNAKYNKDLIKSH---FSVMPL 463
+LELG+GTG + +AA V +D+ L + NA N L+ + SV+PL
Sbjct: 102 ILELGSGTGAAGLALAAALPAHAVLSDLPAA--LPNLRHNASLNAPLLDARGGSVSVVPL 159
Query: 464 DFTDTA 481
+ D A
Sbjct: 160 PWGDAA 165
>12_02_1097 - 26059963-26061093
Length = 376
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +2
Query: 224 WRGAFLLGDWLIHLGLKGELSNKNVLELGAGTGVTSIVAALFAEKVVCTDINV 382
WRG+ L DW++ ++ N+++ G G G VA F D+ V
Sbjct: 115 WRGSSTLADWMM------DMHVMNLVDFGGGAGTAGHVAEGFYNVYTSKDVKV 161
>02_01_0417 -
3048519-3048710,3048903-3050600,3050622-3050909,
3052308-3052377,3052417-3052668,3053235-3055297
Length = 1520
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = -2
Query: 540 TSAAIMKSTSLITLLSFELHAVSVKSSGITEKCDFIKSLLYF--AFRFIRSRIPPTLMSV 367
T A M+ L L+S L ++ S I + + +K+L+ ++ + IPP LM++
Sbjct: 569 TGAIPMEIGELKALVSLNLSFNNLNSE-IPQSMNNLKNLMVLDLSYNHLTGAIPPALMNL 627
Query: 366 HTTFSANRAATILVTPVP 313
H N + L PVP
Sbjct: 628 HFLSKFNVSYNDLEGPVP 645
>04_04_1595 + 34678134-34678223,34678309-34678511,34679924-34680227
Length = 198
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = -2
Query: 198 AVLGLCSILITFLLGLTASRSPSSSNLAVCPVMGSKNGNSDMTSCMRCGL 49
A G C I+ F+ G TA+R+ +A+C GS+ ++M S GL
Sbjct: 88 AFSGFCFIVCCFVYGETATRAGGRRRIALCVRFGSQ--ETEMWSVHAFGL 135
>06_03_0957 + 26307062-26308987
Length = 641
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -2
Query: 120 LAVCPVMGSKNGNSDMTSCMRCGLTKLKVVDAP 22
LAVC V GS NG M C+ GL ++ D P
Sbjct: 442 LAVCDVSGSMNGR-PMDVCVALGLLLSELCDEP 473
>06_03_0126 +
16978566-16979104,16979279-16979365,16979481-16979537,
16979648-16979886,16981776-16981894,16982010-16982096,
16983898-16983971,16984483-16984547,16984581-16984961,
16985136-16985401
Length = 637
Score = 28.3 bits (60), Expect = 5.9
Identities = 22/79 (27%), Positives = 37/79 (46%)
Frame = +2
Query: 185 SPKTAISLVGRQVWRGAFLLGDWLIHLGLKGELSNKNVLELGAGTGVTSIVAALFAEKVV 364
+PK S++ + AF+ W+I GL +S + ELGAG A L VV
Sbjct: 198 NPKLETSVLSISLNTAAFV---WMIPFGLGSAISTRVSNELGAG---RPRAARLAVRVVV 251
Query: 365 CTDINVGGILDLINLNAKY 421
++ G ++ L+ + +Y
Sbjct: 252 FMAVSEGLVIGLVLVGVRY 270
>09_06_0308 -
22199389-22199451,22199604-22199924,22200178-22200423,
22202152-22203337,22203487-22203551,22204205-22204486,
22205005-22205106,22205587-22206105
Length = 927
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -2
Query: 342 AATILVTPVPAPNSRTFLLESSPFKPR 262
AAT P P+P+S FLL SP PR
Sbjct: 13 AATDAFLPKPSPSSAPFLLLLSPSTPR 39
>06_01_0602 - 4342333-4342790,4342899-4345623
Length = 1060
Score = 27.9 bits (59), Expect = 7.8
Identities = 22/87 (25%), Positives = 39/87 (44%)
Frame = -2
Query: 543 ITSAAIMKSTSLITLLSFELHAVSVKSSGITEKCDFIKSLLYFAFRFIRSRIPPTLMSVH 364
I +AA+ T L L+ H V GI + C +++L + +R +IP L +
Sbjct: 434 IPAAALSNLTQLRWLVLHHNHLAGVIPPGIAQ-CVNLQNL-DLSHNMLRGKIPDDLSELS 491
Query: 363 TTFSANRAATILVTPVPAPNSRTFLLE 283
N ++ +L +PA R +L+
Sbjct: 492 GLLYLNLSSNLLEGMIPATIGRMAMLQ 518
>05_04_0167 +
18668004-18668287,18668961-18669043,18669346-18669434,
18670085-18670158,18670234-18670284,18671486-18671553,
18671666-18672234,18672333-18672383
Length = 422
Score = 27.9 bits (59), Expect = 7.8
Identities = 24/77 (31%), Positives = 31/77 (40%)
Frame = -2
Query: 525 MKSTSLITLLSFELHAVSVKSSGITEKCDFIKSLLYFAFRFIRSRIPPTLMSVHTTFSAN 346
M+ T S LH+ S SS + CD + AF+ + T +S TFS
Sbjct: 272 MQRTEPYKFPSLGLHSNSKPSSVVLSACDILSQS--DAFKSFSEK--STKLSEECTFSKE 327
Query: 345 RAATILVTPVPAPNSRT 295
VTPVPA T
Sbjct: 328 MDEGKTVTPVPATGHDT 344
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,021,381
Number of Sequences: 37544
Number of extensions: 359436
Number of successful extensions: 1014
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1011
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1714968940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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