Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17a15
         (579 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   3.8  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   5.0  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   8.8  

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
 Frame = +2

Query: 440 PGIVKHRNSFRSLHRPDLK--RVPYLRRMKPDE 532
           P +  +  S   LHRPD K   VP L  + PD+
Sbjct: 122 PNLFIYALSVAILHRPDTKDLPVPPLTEVFPDK 154


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 518 CDVDKVLVLDQVGEE 474
           CDVD     DQ+G+E
Sbjct: 132 CDVDVSTFFDQLGQE 146


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = +2

Query: 191 CDLKKKSNNSLQMNPVASGDNVTTGLSAHRLKEELPLLV 307
           C  + +S     +  VA  D     ++  ++KEELP  V
Sbjct: 327 CWNEHQSLQRQNLEMVAQNDRTLQMIAGMKIKEELPHFV 365


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,043
Number of Sequences: 438
Number of extensions: 3221
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16748661
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)