Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17a12
         (539 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC055088-1|AAH55088.1|  209|Homo sapiens MRPL21 protein protein.       67   4e-11
BX537615-1|CAD97800.1|  917|Homo sapiens hypothetical protein pr...    31   2.0  
BC146763-1|AAI46764.1| 1006|Homo sapiens myosin ID protein.            31   2.0  
AB018270-1|BAA34447.2| 1010|Homo sapiens KIAA0727 protein protein.     31   2.0  
BC132827-1|AAI32828.1|  949|Homo sapiens CCDC66 protein protein.       29   7.9  
BC117241-1|AAI17242.1| 1018|Homo sapiens myosin IG protein.            29   7.9  
BC113544-1|AAI13545.1| 1018|Homo sapiens myosin IG protein.            29   7.9  
BC047509-1|AAH47509.1|  831|Homo sapiens coiled-coil domain cont...    29   7.9  
AK131089-1|BAC85139.1|  812|Homo sapiens FLJ00293 protein protein.     29   7.9  
AK074135-1|BAB84961.1|  333|Homo sapiens FLJ00208 protein protein.     29   7.9  
AF380933-1|AAK58093.1|  633|Homo sapiens unconventional myosin 1...    29   7.9  
AF380932-1|AAK58092.1|  633|Homo sapiens unconventional myosin 1...    29   7.9  

>BC055088-1|AAH55088.1|  209|Homo sapiens MRPL21 protein protein.
          Length = 209

 Score = 66.9 bits (156), Expect = 4e-11
 Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
 Frame = +1

Query: 226 EVIATCNKLIEQNA-SRNFAIVHILGKQWRVTDGDLLVVEGYWPPNIGDQITLDKVLVAA 402
           EV+   N++I      R FA+VH   +QW+VT  DL+++        G++I L+KVL+  
Sbjct: 82  EVVKKVNEMIVTGQYGRLFAVVHFASRQWKVTSEDLILIGNELDLACGERIRLEKVLLVG 141

Query: 403 TKDFSLIGRPLVQPGLVTVTATIISKGLSHTR 498
             +F+L+G+PL+   LV V AT+I K  S  R
Sbjct: 142 ADNFTLLGKPLLGKDLVRVEATVIEKTESWPR 173


>BX537615-1|CAD97800.1|  917|Homo sapiens hypothetical protein
           protein.
          Length = 917

 Score = 31.5 bits (68), Expect = 2.0
 Identities = 21/90 (23%), Positives = 40/90 (44%)
 Frame = +1

Query: 31  FKWEGINFKHIEVFNNK*LSSIMALLRSGLQRVANIFGGTQGGILSRFVTSLVPSENKSV 210
           ++ EGI +KHI+ FNN+ +  ++     G+  + +      G +        + S+    
Sbjct: 334 YQREGIPWKHIDYFNNQIIVDLVEQQHKGIIAILDDACMNVGKVTDEMFLEALNSKLGKH 393

Query: 211 AETSKEVIATCNKLIEQNASRNFAIVHILG 300
           A  S   +   +K++E    R+F I H  G
Sbjct: 394 AHFSSRKLCASDKILE--FDRDFRIRHYAG 421


>BC146763-1|AAI46764.1| 1006|Homo sapiens myosin ID protein.
          Length = 1006

 Score = 31.5 bits (68), Expect = 2.0
 Identities = 21/90 (23%), Positives = 40/90 (44%)
 Frame = +1

Query: 31  FKWEGINFKHIEVFNNK*LSSIMALLRSGLQRVANIFGGTQGGILSRFVTSLVPSENKSV 210
           ++ EGI +KHI+ FNN+ +  ++     G+  + +      G +        + S+    
Sbjct: 423 YQREGIPWKHIDYFNNQIIVDLVEQQHKGIIAILDDACMNVGKVTDEMFLEALNSKLGKH 482

Query: 211 AETSKEVIATCNKLIEQNASRNFAIVHILG 300
           A  S   +   +K++E    R+F I H  G
Sbjct: 483 AHFSSRKLCASDKILE--FDRDFRIRHYAG 510


>AB018270-1|BAA34447.2| 1010|Homo sapiens KIAA0727 protein protein.
          Length = 1010

 Score = 31.5 bits (68), Expect = 2.0
 Identities = 21/90 (23%), Positives = 40/90 (44%)
 Frame = +1

Query: 31  FKWEGINFKHIEVFNNK*LSSIMALLRSGLQRVANIFGGTQGGILSRFVTSLVPSENKSV 210
           ++ EGI +KHI+ FNN+ +  ++     G+  + +      G +        + S+    
Sbjct: 427 YQREGIPWKHIDYFNNQIIVDLVEQQHKGIIAILDDACMNVGKVTDEMFLEALNSKLGKH 486

Query: 211 AETSKEVIATCNKLIEQNASRNFAIVHILG 300
           A  S   +   +K++E    R+F I H  G
Sbjct: 487 AHFSSRKLCASDKILE--FDRDFRIRHYAG 514


>BC132827-1|AAI32828.1|  949|Homo sapiens CCDC66 protein protein.
          Length = 949

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
 Frame = +1

Query: 175 VTSLVPSENKSVAETSKEVIATC-NKLIEQNASRNFAIVHILGKQWRVTDGDLLVVEGYW 351
           + S VP+ENKSV    +E    C  K+  +N  +   I   LG++       L   +  W
Sbjct: 209 MVSSVPAENKSVLNEHQETSKQCEQKIAIENEWKPADIFSTLGER-ECDRSSLEAKKAQW 267

Query: 352 PPNIGDQITLDK 387
              + +Q+ L K
Sbjct: 268 RKELDEQVALKK 279


>BC117241-1|AAI17242.1| 1018|Homo sapiens myosin IG protein.
          Length = 1018

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
 Frame = +1

Query: 31  FKWEGINFKHIEVFNNK*LSSIMALLRSGLQRVANIFGGTQGGILSR-FVTSLVPSENKS 207
           ++ EGI ++ +E FNN  +  ++     G+  V +    + G I  R F+ +L       
Sbjct: 435 YEREGITWQSVEYFNNATIVDLVERPHRGILAVLDEACSSAGTITDRIFLQTLDTHHRHH 494

Query: 208 VAETSKEVIATCNKLIEQNASRNFAIVHILG 300
           +  TS+++  T +K +E    R+F I H  G
Sbjct: 495 LHYTSRQLCPT-DKTME--FGRDFRIKHYAG 522


>BC113544-1|AAI13545.1| 1018|Homo sapiens myosin IG protein.
          Length = 1018

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
 Frame = +1

Query: 31  FKWEGINFKHIEVFNNK*LSSIMALLRSGLQRVANIFGGTQGGILSR-FVTSLVPSENKS 207
           ++ EGI ++ +E FNN  +  ++     G+  V +    + G I  R F+ +L       
Sbjct: 435 YEREGITWQSVEYFNNATIVDLVERPHRGILAVLDEACSSAGTITDRIFLQTLDTHHRHH 494

Query: 208 VAETSKEVIATCNKLIEQNASRNFAIVHILG 300
           +  TS+++  T +K +E    R+F I H  G
Sbjct: 495 LHYTSRQLCPT-DKTME--FGRDFRIKHYAG 522


>BC047509-1|AAH47509.1|  831|Homo sapiens coiled-coil domain
           containing 66 protein.
          Length = 831

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
 Frame = +1

Query: 175 VTSLVPSENKSVAETSKEVIATC-NKLIEQNASRNFAIVHILGKQWRVTDGDLLVVEGYW 351
           + S VP+ENKSV    +E    C  K+  +N  +   I   LG++       L   +  W
Sbjct: 92  MVSSVPAENKSVLNEHQETSKQCEQKIAIENEWKPADIFSTLGER-ECDRSSLEAKKAQW 150

Query: 352 PPNIGDQITLDK 387
              + +Q+ L K
Sbjct: 151 RKELDEQVALKK 162


>AK131089-1|BAC85139.1|  812|Homo sapiens FLJ00293 protein protein.
          Length = 812

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
 Frame = +1

Query: 31  FKWEGINFKHIEVFNNK*LSSIMALLRSGLQRVANIFGGTQGGILSR-FVTSLVPSENKS 207
           ++ EGI ++ +E FNN  +  ++     G+  V +    + G I  R F+ +L       
Sbjct: 229 YEREGITWQSVEYFNNATIVDLVERPHRGILAVLDEACSSAGTITDRIFLQTLDTHHRHH 288

Query: 208 VAETSKEVIATCNKLIEQNASRNFAIVHILG 300
           +  TS+++  T +K +E    R+F I H  G
Sbjct: 289 LHYTSRQLCPT-DKTME--FGRDFRIKHYAG 316


>AK074135-1|BAB84961.1|  333|Homo sapiens FLJ00208 protein protein.
          Length = 333

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
 Frame = +1

Query: 31  FKWEGINFKHIEVFNNK*LSSIMALLRSGLQRVANIFGGTQGGILSR-FVTSLVPSENKS 207
           ++ EGI ++ +E FNN  +  ++     G+  V +    + G I  R F+ +L       
Sbjct: 243 YEREGITWQSVEYFNNATIVDLVERPHRGILAVLDEACSSAGTITDRIFLQTLDTHHRHH 302

Query: 208 VAETSKEVIATCNKLIEQNASRNFAIVHILG 300
           +  TS+++  T +K +E    R+F I H  G
Sbjct: 303 LHYTSRQLCPT-DKTME--FGRDFRIKHYAG 330


>AF380933-1|AAK58093.1|  633|Homo sapiens unconventional myosin 1G
           methonine form protein.
          Length = 633

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
 Frame = +1

Query: 31  FKWEGINFKHIEVFNNK*LSSIMALLRSGLQRVANIFGGTQGGILSR-FVTSLVPSENKS 207
           ++ EGI ++ +E FNN  +  ++     G+  V +    + G I  R F+ +L       
Sbjct: 403 YEREGITWQSVEYFNNATIVDLVERPHRGILAVLDEACSSAGTITDRIFLQTLDTHHRHH 462

Query: 208 VAETSKEVIATCNKLIEQNASRNFAIVHILG 300
           +  TS+++  T +K +E    R+F I H  G
Sbjct: 463 LHYTSRQLCPT-DKTME--FGRDFRIKHYAG 490


>AF380932-1|AAK58092.1|  633|Homo sapiens unconventional myosin 1G
           valine form protein.
          Length = 633

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
 Frame = +1

Query: 31  FKWEGINFKHIEVFNNK*LSSIMALLRSGLQRVANIFGGTQGGILSR-FVTSLVPSENKS 207
           ++ EGI ++ +E FNN  +  ++     G+  V +    + G I  R F+ +L       
Sbjct: 403 YEREGITWQSVEYFNNATIVDLVERPHRGILAVLDEACSSAGTITDRIFLQTLDTHHRHH 462

Query: 208 VAETSKEVIATCNKLIEQNASRNFAIVHILG 300
           +  TS+++  T +K +E    R+F I H  G
Sbjct: 463 LHYTSRQLCPT-DKTME--FGRDFRIKHYAG 490


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,639,503
Number of Sequences: 237096
Number of extensions: 1778795
Number of successful extensions: 10462
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 10397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10462
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5251598958
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)