Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17a11
         (572 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY084209-1|AAL89947.1|  866|Drosophila melanogaster SD08058p pro...    28   7.8  
AE014297-2098|AAF55241.1|  866|Drosophila melanogaster CG4225-PA...    28   7.8  

>AY084209-1|AAL89947.1|  866|Drosophila melanogaster SD08058p
           protein.
          Length = 866

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = -3

Query: 498 ITI*HFLYFSFNWFHNFIVF*TVNSFCYKPAELCIIFWPMNFVRK 364
           + + +F+Y +FNW+   IVF T+  F Y  + + I  W   + R+
Sbjct: 385 VAVAYFVY-AFNWWFGLIVFLTM--FLYIASTIAITEWRTKYQRR 426


>AE014297-2098|AAF55241.1|  866|Drosophila melanogaster CG4225-PA
           protein.
          Length = 866

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = -3

Query: 498 ITI*HFLYFSFNWFHNFIVF*TVNSFCYKPAELCIIFWPMNFVRK 364
           + + +F+Y +FNW+   IVF T+  F Y  + + I  W   + R+
Sbjct: 385 VAVAYFVY-AFNWWFGLIVFLTM--FLYIASTIAITEWRTKYQRR 426


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,197,917
Number of Sequences: 53049
Number of extensions: 416626
Number of successful extensions: 890
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 890
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2255362491
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)