Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17a07
         (337 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3957|AAF56597.1| 1304|Drosophila melanogaster CG6490-PA...    28   2.6  
AE014296-1684|AAZ66069.1|  189|Drosophila melanogaster CG33700-P...    27   8.0  

>AE014297-3957|AAF56597.1| 1304|Drosophila melanogaster CG6490-PA
           protein.
          Length = 1304

 Score = 28.3 bits (60), Expect = 2.6
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +3

Query: 120 LCSPIYFCRQITNSKIILRLLR 185
           +C P+YF   +TN  +ILR LR
Sbjct: 207 VCKPLYFALILTNGTLILRHLR 228


>AE014296-1684|AAZ66069.1|  189|Drosophila melanogaster CG33700-PA
           protein.
          Length = 189

 Score = 26.6 bits (56), Expect = 8.0
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -2

Query: 300 SSEITIRCYRAYNGYN*MFSLKTFTFSYFMNN 205
           S +I +  Y+  NGY      +T  F Y+M N
Sbjct: 82  SVDINVALYKKSNGYRPFLFNQTLDFCYYMRN 113


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,889,945
Number of Sequences: 53049
Number of extensions: 247151
Number of successful extensions: 497
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 497
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 756348948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)