Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte17a07
(337 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40028-10|AAA81121.3| 363|Caenorhabditis elegans Serpentine rec... 30 0.47
Z81594-6|CAJ85771.1| 153|Caenorhabditis elegans Hypothetical pr... 28 1.9
Z81594-5|CAJ85770.1| 262|Caenorhabditis elegans Hypothetical pr... 28 1.9
Z81594-4|CAB04747.1| 282|Caenorhabditis elegans Hypothetical pr... 28 1.9
Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical pr... 27 4.4
U10401-1|AAA19058.1| 131|Caenorhabditis elegans Hypothetical pr... 27 4.4
AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical ... 27 4.4
Z72507-11|CAA96628.2| 123|Caenorhabditis elegans Hypothetical p... 26 5.8
Z69794-2|CAA93681.1| 786|Caenorhabditis elegans Hypothetical pr... 26 5.8
Z77663-6|CAB01207.1| 360|Caenorhabditis elegans Hypothetical pr... 26 7.7
>U40028-10|AAA81121.3| 363|Caenorhabditis elegans Serpentine
receptor, class e (epsilon)protein 40 protein.
Length = 363
Score = 29.9 bits (64), Expect = 0.47
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = -1
Query: 259 IQLNVFSQNFHIFIFYEQFLDNQGHLNNLRIILLFV----IWRQKYIGEQRH 116
+Q F Q + IF++Y N G N + I+ L V +WR+K+ G RH
Sbjct: 277 LQYYNFFQEYEIFLYYAIDWVNAG--NTVAIVPLTVALEPVWRRKFFGNIRH 326
>Z81594-6|CAJ85771.1| 153|Caenorhabditis elegans Hypothetical
protein T20F10.2c protein.
Length = 153
Score = 27.9 bits (59), Expect = 1.9
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = -1
Query: 289 NNTLL*SLQWIQ---LNVFSQNFHIFIFYEQFLDNQGHLNNL 173
NNT L SL Q +N +Q I F ++ L N HLNNL
Sbjct: 18 NNTALNSLVSTQAQLINQLNQTIGIIQFEKEELKNAAHLNNL 59
>Z81594-5|CAJ85770.1| 262|Caenorhabditis elegans Hypothetical
protein T20F10.2b protein.
Length = 262
Score = 27.9 bits (59), Expect = 1.9
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = -1
Query: 289 NNTLL*SLQWIQ---LNVFSQNFHIFIFYEQFLDNQGHLNNL 173
NNT L SL Q +N +Q I F ++ L N HLNNL
Sbjct: 127 NNTALNSLVSTQAQLINQLNQTIGIIQFEKEELKNAAHLNNL 168
>Z81594-4|CAB04747.1| 282|Caenorhabditis elegans Hypothetical
protein T20F10.2a protein.
Length = 282
Score = 27.9 bits (59), Expect = 1.9
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = -1
Query: 289 NNTLL*SLQWIQ---LNVFSQNFHIFIFYEQFLDNQGHLNNL 173
NNT L SL Q +N +Q I F ++ L N HLNNL
Sbjct: 147 NNTALNSLVSTQAQLINQLNQTIGIIQFEKEELKNAAHLNNL 188
>Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical protein
F40E10.4 protein.
Length = 1410
Score = 26.6 bits (56), Expect = 4.4
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -2
Query: 324 GECFLLQYSSEITIRCYRAYNG 259
GEC Q SS+ T +C+ ++G
Sbjct: 1084 GECVASQNSSDFTCKCHEGFSG 1105
>U10401-1|AAA19058.1| 131|Caenorhabditis elegans Hypothetical
protein T20B12.5 protein.
Length = 131
Score = 26.6 bits (56), Expect = 4.4
Identities = 17/60 (28%), Positives = 25/60 (41%)
Frame = -2
Query: 336 FFFNGECFLLQYSSEITIRCYRAYNGYN*MFSLKTFTFSYFMNNF*ITRDILITLELSCY 157
FF+N LQ+ I + A N +N TF Y+ N + IL L +S +
Sbjct: 68 FFYNSR--FLQFKVSIRCPLFHAQNIFNSKLEKYECTFKYYSNPLLVNVIILFGLRISVW 125
>AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 26.6 bits (56), Expect = 4.4
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -2
Query: 324 GECFLLQYSSEITIRCYRAYNG 259
GEC Q SS+ T +C+ ++G
Sbjct: 1084 GECVASQNSSDFTCKCHEGFSG 1105
>Z72507-11|CAA96628.2| 123|Caenorhabditis elegans Hypothetical
protein F17C11.6 protein.
Length = 123
Score = 26.2 bits (55), Expect = 5.8
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 203 KLFIKYENVKVLRENIQLYPL*A-L*QRIVISLEY 304
KLF YE+ KVLR I L + + L +++SL Y
Sbjct: 73 KLFSSYESFKVLRRGIVLLSMSSTLASSLIMSLNY 107
>Z69794-2|CAA93681.1| 786|Caenorhabditis elegans Hypothetical
protein R03G8.4 protein.
Length = 786
Score = 26.2 bits (55), Expect = 5.8
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = +2
Query: 71 TSKLTTMCWL--GWAVAMSLFSYIFLSPNH 154
T K WL G+A M+ + Y FL PN+
Sbjct: 343 TMKFWDQLWLNEGFATYMTAYGYTFLDPNY 372
>Z77663-6|CAB01207.1| 360|Caenorhabditis elegans Hypothetical
protein F53F4.7 protein.
Length = 360
Score = 25.8 bits (54), Expect = 7.7
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +2
Query: 179 IKMSLVI*KLFIKYENVKVLREN 247
I +SL+ ++ Y+N+KVLR+N
Sbjct: 14 IPLSLIFNNIYQNYKNLKVLRKN 36
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,563,924
Number of Sequences: 27780
Number of extensions: 144286
Number of successful extensions: 423
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 402
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 423
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 418861482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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