Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17a07
         (337 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    24   0.43 
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   2.3  
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    21   4.0  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    21   5.3  
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    21   5.3  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   5.3  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   5.3  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   5.3  
DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    20   7.0  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    20   7.0  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         20   9.2  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    20   9.2  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    20   9.2  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    20   9.2  

>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 24.2 bits (50), Expect = 0.43
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 118 HCYSPTKPTHCG*LGCFRYFFLI 50
           H YS T P+HC  + C  +F+ I
Sbjct: 184 HTYSETGPSHC--VVCQNFFYQI 204


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.8 bits (44), Expect = 2.3
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 241 SQNFHIFIFYEQFLDN 194
           S+N H+F+  +QF+ N
Sbjct: 553 SKNQHLFVELDQFIQN 568


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 21.0 bits (42), Expect = 4.0
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +3

Query: 240 EKTFSCIHC 266
           EK FSC HC
Sbjct: 68  EKPFSCQHC 76


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 20.6 bits (41), Expect = 5.3
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 96  GLVGL*QCLCSPIYFCRQITNSKII 170
           GLV   Q +CSP  F   +  S+++
Sbjct: 146 GLVNNTQPMCSPKLFAFDLNTSQLL 170


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 20.6 bits (41), Expect = 5.3
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +3

Query: 246 TFSCIHCKLYNSVLLFHLNI 305
           ++SC++  + NS L  H N+
Sbjct: 23  SYSCVNKSMLNSHLKSHSNV 42


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 20.6 bits (41), Expect = 5.3
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +3

Query: 96  GLVGL*QCLCSPIYFCRQITNSKIILRL 179
           GL+   Q +CSP      +  SK++ ++
Sbjct: 145 GLINNIQLMCSPKLLAFDLNTSKLLKQI 172


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 20.6 bits (41), Expect = 5.3
 Identities = 4/16 (25%), Positives = 13/16 (81%)
 Frame = -1

Query: 169  IILLFVIWRQKYIGEQ 122
            ++++ + WR +Y+G++
Sbjct: 1628 VVIVALRWRSRYLGDR 1643


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 20.6 bits (41), Expect = 5.3
 Identities = 4/16 (25%), Positives = 13/16 (81%)
 Frame = -1

Query: 169  IILLFVIWRQKYIGEQ 122
            ++++ + WR +Y+G++
Sbjct: 1624 VVIVALRWRSRYLGDR 1639


>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 6   RQNLEKIVSLTKTNEIKK 59
           +QNL+K+     TNE +K
Sbjct: 83  KQNLDKLAEWFTTNEPEK 100


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 6   RQNLEKIVSLTKTNEIKK 59
           +QNL+K+     TNE +K
Sbjct: 83  KQNLDKLAEWFTTNEPEK 100


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 96  GLVGL*QCLCSPIYFCRQITNSKII 170
           GLV   Q +CSP      +T S+++
Sbjct: 141 GLVNNTQPMCSPKLLTFDLTTSQLL 165


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 96  GLVGL*QCLCSPIYFCRQITNSKII 170
           GLV   Q +CSP      +T S+++
Sbjct: 141 GLVNNTQPMCSPKLLTFDLTTSQLL 165


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 96  GLVGL*QCLCSPIYFCRQITNSKII 170
           GLV   Q +CSP      +T S+++
Sbjct: 141 GLVNNTQPMCSPKLLTFDLTTSQLL 165


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +2

Query: 101 GWAVAMSLFSYIFLSPNHK 157
           G+A  MS  SY   SPN K
Sbjct: 131 GYASPMSTSSYDPYSPNSK 149


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,734
Number of Sequences: 438
Number of extensions: 1841
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7591023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)