Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17a05
         (606 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0340 + 23294044-23294166,23294395-23294640,23294907-232949...    29   2.2  
02_05_0336 + 28033315-28033365,28033580-28033585,28033798-280338...    27   8.7  

>03_05_0340 +
           23294044-23294166,23294395-23294640,23294907-23294945,
           23295439-23295805,23295904-23296136,23296496-23296756
          Length = 422

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -2

Query: 161 KKQLICTLKLIEHLDGIHNTFV 96
           KK  +C  K +EHLDG  N FV
Sbjct: 9   KKSCVCCQKYLEHLDGKMNCFV 30


>02_05_0336 +
           28033315-28033365,28033580-28033585,28033798-28033884,
           28034741-28034830,28035736-28037778,28037916-28038062,
           28038148-28038560,28038656-28038755
          Length = 978

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/47 (27%), Positives = 25/47 (53%)
 Frame = +1

Query: 370 SAESQALLKNCYIKFIEIMNSPTIAFNCKTLFFNNCIHLLISK*ILA 510
           S++ Q++  NC + F          +NC ++F N+C +  +S+  LA
Sbjct: 552 SSKDQSVCSNCQLTF-GFTRKKHNCYNCGSMFCNSCSNNKVSRAALA 597


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,464,510
Number of Sequences: 37544
Number of extensions: 206756
Number of successful extensions: 308
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 305
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 308
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1442939384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)