Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17a05
         (606 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative 5'-nucleo...    23   5.8  
AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.     23   5.8  
AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.     23   5.8  

>AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative
           5'-nucleotidase protein.
          Length = 570

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = -3

Query: 208 TLYNVIRKFYLVLIKKKNN*YVL*N*LNIWTEYIILLFLLISYENSVQ 65
           T Y+ I   Y +++KK NN  VL      + +Y+  L +    E  VQ
Sbjct: 269 TKYDTIEGDYPLVVKKSNNHTVLITQARSFGKYVGRLTVNFDCEGEVQ 316


>AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -3

Query: 577 FDNIVIIYKLPFLINFGLFYAAQLVF 500
           +DN+   Y    +INF  FY   + F
Sbjct: 650 YDNLPFGYPFDRVINFNYFYTKNMYF 675


>AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -3

Query: 577 FDNIVIIYKLPFLINFGLFYAAQLVF 500
           +DN+   Y    +INF  FY   + F
Sbjct: 650 YDNLPFGYPFDRVINFNYFYTKNMYF 675


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 542,642
Number of Sequences: 2352
Number of extensions: 9507
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)