Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17a04
         (475 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0505 - 3759254-3759490,3759846-3759989,3760135-3760347,376...    27   5.8  
01_06_0588 - 30440817-30441203,30441323-30441463,30441598-30442404     27   7.7  

>07_01_0505 -
           3759254-3759490,3759846-3759989,3760135-3760347,
           3760439-3760990,3761339-3761806,3761959-3762023,
           3762133-3762265,3763798-3764022
          Length = 678

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -1

Query: 103 SSSFGAYSKQTNKQIFPLYNISIDSAK 23
           S  FG Y  QTN+  +P Y+  I + K
Sbjct: 239 SGRFGNYQNQTNRTTYPCYSSQIFNGK 265


>01_06_0588 - 30440817-30441203,30441323-30441463,30441598-30442404
          Length = 444

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 10/39 (25%), Positives = 24/39 (61%)
 Frame = -3

Query: 470 HHLEQLLIQRFKGHEKIRDLNXIPNFRRKWPKQKDLTCE 354
           +HLE+++ + ++GHE  R++    + R ++ K  +  C+
Sbjct: 342 NHLERVVFEVYRGHEWQREMAKFLHGRARFLKAMEFHCQ 380


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,279,651
Number of Sequences: 37544
Number of extensions: 166021
Number of successful extensions: 241
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 241
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 967140324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)