Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte17a04
         (475 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               25   0.55 
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    22   2.9  
AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.          22   3.8  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     21   8.9  
AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex det...    21   8.9  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    21   8.9  
AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex det...    21   8.9  
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    21   8.9  
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    21   8.9  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   8.9  

>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 24.6 bits (51), Expect = 0.55
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 377 KQKDLTCECFLKCHFTSH 324
           +Q D   +C+LKC  T H
Sbjct: 49  EQDDQNLKCYLKCFMTKH 66


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -3

Query: 380 PKQKDLTCECFLKCHF 333
           PK   + CE + KC F
Sbjct: 55  PKSYGIKCEIYAKCEF 70



 Score = 20.6 bits (41), Expect = 8.9
 Identities = 8/29 (27%), Positives = 18/29 (62%)
 Frame = +1

Query: 52  EERFVCLFVSNRLRNY*TDFKNSFSIXSR 138
           EE+ + + + + +RNY T F + + + +R
Sbjct: 324 EEKRMVIILPDGIRNYLTKFVSEYWMETR 352


>AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.
          Length = 148

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -2

Query: 96  VSEPIRNKQTNKSFLFIILV*IP 28
           V +P+ N  T   FLF++ + +P
Sbjct: 55  VHDPVTNSDTYIGFLFVLGLIVP 77


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 252 SQTSDPPSLRFGNIKTHM 199
           SQT   P LRFG + T +
Sbjct: 265 SQTGLSPYLRFGCLSTRL 282


>AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -3

Query: 272 IXPNLFNHRLATRPRFAS 219
           I PN +  R +  PRF S
Sbjct: 388 IPPNAYRFRPSLNPRFGS 405


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -3

Query: 272 IXPNLFNHRLATRPRFAS 219
           I PN +  R +  PRF S
Sbjct: 388 IPPNAYRFRPSLNPRFGS 405


>AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -3

Query: 272 IXPNLFNHRLATRPRFAS 219
           I PN +  R +  PRF S
Sbjct: 388 IPPNAYRFRPSLNPRFGS 405


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -3

Query: 272 IXPNLFNHRLATRPRFAS 219
           I PN +  R +  PRF S
Sbjct: 388 IPPNAYRFRPSLNPRFGS 405


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -3

Query: 272 IXPNLFNHRLATRPRFAS 219
           I PN +  R +  PRF S
Sbjct: 377 IPPNAYRFRPSLNPRFGS 394


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -1

Query: 109 NRSSSFGAYSKQTNKQIFPLYNISIDSA 26
           NRS    +Y  Q   Q   L+N++ D A
Sbjct: 19  NRSFYSASYPPQNRSQEEDLWNLATDRA 46


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,584
Number of Sequences: 438
Number of extensions: 2127
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12805416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)